FFCP PHASE1:Hg19::chr1:2232428..2232442,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:2232428..2232442,- | |||
|coexpression_cluster_id=C1238 | |||
|description=CAGE_peak_at_chr1:2232428..2232442,- | |||
|id=chr1:2232428..2232442,- | |||
|ontology_enrichment_celltype=CL:0000037!1.08e-58!172;CL:0000566!1.08e-58!172;CL:0000738!3.71e-55!140;CL:0000988!4.28e-54!182;CL:0002032!3.83e-51!165;CL:0000837!3.83e-51!165;CL:0002031!2.07e-43!124;CL:0002087!7.61e-43!119;CL:0002057!7.74e-40!42;CL:0000766!5.39e-38!76;CL:0000763!4.57e-37!112;CL:0000049!4.57e-37!112;CL:0000860!2.00e-36!45;CL:0000557!2.89e-33!71;CL:0000839!2.48e-30!70;CL:0002009!1.69e-27!65;CL:0002194!3.92e-27!63;CL:0000576!3.92e-27!63;CL:0000040!3.92e-27!63;CL:0000559!3.92e-27!63;CL:0000134!5.44e-19!358;CL:0002320!3.72e-18!365;CL:0000034!1.89e-15!444;CL:0000219!3.12e-15!390;CL:0000048!1.25e-14!430;CL:0000723!4.39e-14!436;CL:0000838!1.45e-12!52;CL:0000542!3.35e-12!53;CL:0000051!3.35e-12!53;CL:0000624!1.03e-11!6;CL:0002393!1.64e-09!9;CL:0002397!1.64e-09!9;CL:0000084!4.84e-08!25;CL:0000827!4.84e-08!25;CL:0000094!7.49e-08!8;CL:0000791!2.18e-07!18;CL:0000789!2.18e-07!18;CL:0002420!2.18e-07!18;CL:0002419!2.18e-07!18;CL:0000790!2.18e-07!18;CL:0000623!4.52e-07!3;CL:0000825!4.52e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.23e-16;6!CL:0000623;7.23e-13;3!CL:0000791;8.64e-13;18!CL:0000789;8.64e-13;18!CL:0002419;8.64e-13;18!CL:0000784;3.83e-12;3!CL:0000226;4.53e-12;3!CL:0000842;4.53e-12;3!CL:0000767;1.01e-11;3!CL:0000094;3.87e-11;8!CL:0002087;2.28e-09;104!CL:0000084;8.20e-09;25!CL:0000542;9.86e-09;53!CL:0000766;1.53e-08;69!CL:0000081;5.07e-08;11!CL:0000097;2.51e-07;5!CL:0000576;3.70e-07;48!CL:0000738;3.88e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.12e-39,136;CL:0000037,5.94e-35,168;CL:0000988,1.13e-32,177;CL:0002032,6.74e-26,161;CL:0000837,6.74e-26,161;CL:0002087,2.41e-25,115;CL:0002031,6.17e-24,120;CL:0000766,2.02e-18,72;CL:0000624,3.03e-16,6;CL:0000838,1.95e-13,52;CL:0000542,4.08e-13,53;CL:0000051,4.08e-13,53;CL:0000763,4.65e-13,108;CL:0000049,4.65e-13,108;CL:0000623,6.96e-13,3;CL:0000825,6.96e-13,3;CL:0000557,7.72e-13,67;CL:0000791,8.37e-13,18;CL:0000789,8.37e-13,18;CL:0002420,8.37e-13,18;CL:0002419,8.37e-13,18;CL:0000790,8.37e-13,18;CL:0000784,3.90e-12,3;CL:0000226,4.71e-12,3;CL:0000842,4.71e-12,3;CL:0000767,9.21e-12,3;CL:0000839,1.70e-11,66;CL:0000860,1.76e-11,42;CL:0002057,1.76e-11,42;CL:0000134,2.52e-11,354;CL:0000094,3.62e-11,8;CL:0002320,6.52e-11,361;CL:0000473,1.06e-09,48;CL:0000234,1.06e-09,48;CL:0000219,1.86e-09,386;CL:0000034,3.77e-09,441;CL:0000084,8.03e-09,25;CL:0000827,8.03e-09,25;CL:0002194,1.47e-08,59;CL:0000576,1.47e-08,59;CL:0000040,1.47e-08,59;CL:0000559,1.47e-08,59;CL:0000048,2.53e-08,427;CL:0002009,3.44e-08,61;CL:0000723,4.55e-08,433;CL:0000081,4.84e-08,11;CL:0000097,2.56e-07,5;CL:0002028,2.56e-07,5;CL:0002393,3.96e-07,9;CL:0002397,3.96e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;8.64e-13;18!CL:0000051;9.86e-09;53!CL:0002057;5.55e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.63e-30!80;UBERON:0002390!1.79e-27!102;UBERON:0003061!1.79e-27!102;UBERON:0001474!8.79e-27!86;UBERON:0002193!1.03e-23!112;UBERON:0004765!7.32e-21!101;UBERON:0001434!7.32e-21!101;UBERON:0002405!6.48e-19!115;UBERON:0002384!5.08e-17!375;UBERON:0002204!1.42e-11!167;UBERON:0003081!1.42e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.21e-14,98;UBERON:0003061,9.21e-14,98;UBERON:0002371,2.68e-12,76;UBERON:0002193,5.36e-12,108;UBERON:0001474,4.32e-11,82;UBERON:0002405,1.49e-10,93;UBERON:0002384,2.39e-10,371;UBERON:0004765,9.79e-10,90;UBERON:0001434,2.36e-08,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86728553697808,4.98978217526377,2.78669021968937,0,0,0,0,0,3.52320527201817,28.2537658351257,15.6424669026711,13.0206522429511,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,1.41889337933151,0,0.645484683583826,1.35426486594342,0.376484679085209,1.36453075028923,0.449446968890169,0.918251677112708,1.60464513538047,0,0,0.398927315243264,0.426224750532694,0.580418477257168,0.56738522469114,1.24564449799115,0.251248665256743,0,1.3031330682307,0.605399502633369,0.736555271975129,1.58231193720442,0.633765858935825,0.850417199860174,0.628975936525128,3.03287304095537,1.05123824989054,0.64290234678832,1.99508920618874,0,0,0,0,0,2.13365111283254,0.800791974072025,0.574752439954483,0,0.954053754535364,9.67662047486062,8.80855784056408,16.8200220375101,30.3994055731759,5.60508562981536,0.790152254325231,10.622327586147,14.1483874589699,14.3921049299656,0,3.91106719960308,1.89379122293893,1.94826728407911,0,0.883817722424512,0.886135578334485,0.812411591295047,0,0.130059347559878,0.328875809207352,0.552700035571697,0,8.00747441075126,2.40786745280742,2.09071047609954,0.113309342697566,12.6462762888634,7.55980380061786,2.78321661221453,0,0,0,0,0,0,0,0,15.9269327147539,15.2440911596599,12.3100743300379,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,8.34717185068697,11.4398982156026,5.20040501861391,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.704387472105808,6.42717158176393,12.2501960404417,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5357376579715,14.8783026653067,14.2460770270521,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.9248652538986,9.05999643438191,3.20182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56989728039846,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0.383010740264733,1.2700414963433,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0.445773537109913,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:2232428..2232442,- | |||
}} |
Latest revision as of 04:17, 28 July 2015
Short description: | p@chr1:2232428..2232442, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:2232428..2232442, - |
Coexpression cluster: | C1238_CD34_CD14_Eosinophils_CD8_Natural_CD19_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.21e-14 | 98 |
blood island | 9.21e-14 | 98 |
bone marrow | 2.68e-12 | 76 |
hemolymphoid system | 5.36e-12 | 108 |
bone element | 4.32e-11 | 82 |
immune system | 1.49e-10 | 93 |
connective tissue | 2.39e-10 | 371 |
skeletal element | 9.79e-10 | 90 |
skeletal system | 2.36e-08 | 100 |