FFCP PHASE1:Hg19::chr1:230361440..230361444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:230361440..230361444,+ | |||
|description=CAGE_peak_at_chr1:230361440..230361444,+ | |description=CAGE_peak_at_chr1:230361440..230361444,+ | ||
|id=chr1:230361440..230361444,+ | |id=chr1:230361440..230361444,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;8.55e-14;1!CL:0000047;1.54e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.10e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.55e-14;1 | |||
|ontology_enrichment_disease=DOID:14566!5.06e-07!239;DOID:162!5.65e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;8.55e-14;1!UBERON:0000941;8.55e-14;1!UBERON:0007195;8.55e-14;1!UBERON:0001785;8.55e-14;1!UBERON:0002464;8.55e-14;1!UBERON:0004904;8.55e-14;1!UBERON:0001021;8.55e-14;1!UBERON:0003714;1.54e-07;2!UBERON:0005162;1.54e-07;2!UBERON:0000122;1.54e-07;2!UBERON:0000078;1.54e-07;2!UBERON:0002012;1.54e-07;2!UBERON:0008886;1.54e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,3.50e-14,1;UBERON:0000941,3.98e-14,1;UBERON:0001785,3.98e-14,1;UBERON:0002464,3.98e-14,1;UBERON:0004904,3.98e-14,1;UBERON:0001021,3.98e-14,1;UBERON:0003902,3.98e-14,1;UBERON:0005425,3.98e-14,1;UBERON:0007195,1.42e-13,1;UBERON:0003714,1.05e-07,2;UBERON:0005162,1.05e-07,2;UBERON:0000122,1.05e-07,2;UBERON:0000078,1.75e-07,2;UBERON:0007497,1.75e-07,2;UBERON:0003643,1.75e-07,2;UBERON:0003504,1.75e-07,2;UBERON:0003469,1.75e-07,2;UBERON:0003496,1.75e-07,2;UBERON:0002012,1.75e-07,2;UBERON:0008886,1.75e-07,2;UBERON:0007303,1.75e-07,2;UBERON:0002061,1.75e-07,2;UBERON:0005432,1.75e-07,2;UBERON:0004363,1.75e-07,2 | |||
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| ||
|short_description=p@chr1:230361440..230361444,+ | |short_description=p@chr1:230361440..230361444,+ | ||
}} | }} |
Latest revision as of 04:57, 28 July 2015
Short description: | p@chr1:230361440..230361444, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:230361440..230361444, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.10e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
surface | 3.50e-14 | 1 |
cranial nerve II | 3.98e-14 | 1 |
cranial nerve | 3.98e-14 | 1 |
nerve trunk | 3.98e-14 | 1 |
nerve connecting eye with brain | 3.98e-14 | 1 |
nerve | 3.98e-14 | 1 |
retinal neural layer | 3.98e-14 | 1 |
presumptive neural retina | 3.98e-14 | 1 |
stroma of bone marrow | 1.42e-13 | 1 |
neural tissue | 1.05e-07 | 2 |
multi cell component structure | 1.05e-07 | 2 |
neuron projection bundle | 1.05e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.75e-07 | 2 |
developing epithelial placode | 1.75e-07 | 2 |
respiratory system arterial blood vessel | 1.75e-07 | 2 |
respiratory system blood vessel | 1.75e-07 | 2 |
respiratory system artery | 1.75e-07 | 2 |
head blood vessel | 1.75e-07 | 2 |
pulmonary artery | 1.75e-07 | 2 |
pulmonary vascular system | 1.75e-07 | 2 |
pharyngeal vasculature | 1.75e-07 | 2 |
truncus arteriosus | 1.75e-07 | 2 |
aortic sac | 1.75e-07 | 2 |
pharyngeal arch artery | 1.75e-07 | 2 |