FFCP PHASE1:Hg19::chr1:242927602..242927613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:242927602..242927613,- | |||
|description=CAGE_peak_at_chr1:242927602..242927613,- | |description=CAGE_peak_at_chr1:242927602..242927613,- | ||
|id=chr1:242927602..242927613,- | |id=chr1:242927602..242927613,- | ||
|ontology_enrichment_celltype=CL:0002166!3.40e-14!3;CL:0000515!9.40e-11!4;CL:0000680!1.42e-09!57;CL:0000056!1.42e-09!57;CL:0000355!1.42e-09!57;CL:0000188!2.52e-07!9;CL:0000187!4.62e-07!54;CL:0000220!9.80e-07!246 | |ontology_enrichment_celltype=CL:0002166!3.40e-14!3;CL:0000515!9.40e-11!4;CL:0000680!1.42e-09!57;CL:0000056!1.42e-09!57;CL:0000355!1.42e-09!57;CL:0000188!2.52e-07!9;CL:0000187!4.62e-07!54;CL:0000220!9.80e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002166;6.06e-43;3!CL:0000056;1.25e-32;4!CL:0000515;3.48e-20;3!CL:0000680;5.74e-19;7!CL:0000228;2.38e-15;1!CL:0002372;2.38e-15;1!CL:0002159;9.80e-10;14!CL:0002321;3.54e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.95e-43,3;CL:0000515,1.18e-32,4;CL:0000228,2.38e-15,1;CL:0002372,2.38e-15,1;CL:0002159,8.44e-10,14;CL:0002321,8.32e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000515;1.25e-32;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;1.07e-15;1!DOID:3350;1.67e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.16e-15,1;DOID:3350,1.73e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001708!9.40e-11!4;UBERON:0001704!9.40e-11!4;UBERON:0000486!1.26e-10!82;UBERON:0005256!5.16e-10!143;UBERON:0000914!2.37e-09!83;UBERON:0002329!2.37e-09!83;UBERON:0003077!2.37e-09!83;UBERON:0003059!2.37e-09!83;UBERON:0007282!2.37e-09!83;UBERON:0009618!2.37e-09!83;UBERON:0007285!2.37e-09!83;UBERON:0001134!9.08e-09!61;UBERON:0002036!9.08e-09!61;UBERON:0003082!9.08e-09!61;UBERON:0002385!2.10e-08!63;UBERON:0001015!2.10e-08!63;UBERON:0000383!2.10e-08!63;UBERON:0004290!2.68e-07!70;UBERON:0002090!2.72e-07!6 | |ontology_enrichment_uberon=UBERON:0001708!9.40e-11!4;UBERON:0001704!9.40e-11!4;UBERON:0000486!1.26e-10!82;UBERON:0005256!5.16e-10!143;UBERON:0000914!2.37e-09!83;UBERON:0002329!2.37e-09!83;UBERON:0003077!2.37e-09!83;UBERON:0003059!2.37e-09!83;UBERON:0007282!2.37e-09!83;UBERON:0009618!2.37e-09!83;UBERON:0007285!2.37e-09!83;UBERON:0001134!9.08e-09!61;UBERON:0002036!9.08e-09!61;UBERON:0003082!9.08e-09!61;UBERON:0002385!2.10e-08!63;UBERON:0001015!2.10e-08!63;UBERON:0000383!2.10e-08!63;UBERON:0004290!2.68e-07!70;UBERON:0002090!2.72e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;2.03e-32;4!UBERON:0008895;2.03e-32;4!UBERON:0011159;4.29e-26;5!UBERON:0011137;3.13e-12;11!UBERON:0010323;3.13e-12;11!UBERON:0002385;4.54e-11;31!UBERON:0001015;4.54e-11;31!UBERON:0000383;4.54e-11;31!UBERON:0001134;1.23e-08;16!UBERON:0002036;1.23e-08;16!UBERON:0000075;1.38e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.18e-32,4;UBERON:0008895,1.18e-32,4;UBERON:0011159,2.79e-26,5;UBERON:0010188,5.03e-22,6;UBERON:0002539,5.03e-22,6;UBERON:0008816,5.03e-22,6;UBERON:0010323,2.58e-12,11;UBERON:0011137,8.44e-10,14;UBERON:0000075,1.21e-08,16;UBERON:0008814,9.67e-08,18 | |||
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|short_description=p@chr1:242927602..242927613,- | |short_description=p@chr1:242927602..242927613,- | ||
}} | }} |
Latest revision as of 05:48, 28 July 2015
Short description: | p@chr1:242927602..242927613, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:242927602..242927613, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 2.95e-43 | 3 |
skeletal muscle myoblast | 1.18e-32 | 4 |
multinucleate cell | 2.38e-15 | 1 |
myotube | 2.38e-15 | 1 |
general ecto-epithelial cell | 8.44e-10 | 14 |
embryonic cell | 8.32e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.18e-32 | 4 |
splanchnocranium | 1.18e-32 | 4 |
primary subdivision of cranial skeletal system | 2.79e-26 | 5 |
protuberance | 5.03e-22 | 6 |
pharyngeal arch | 5.03e-22 | 6 |
embryonic head | 5.03e-22 | 6 |
cranial skeletal system | 2.58e-12 | 11 |
axial skeletal system | 8.44e-10 | 14 |
subdivision of skeletal system | 1.21e-08 | 16 |
pharyngeal arch system | 9.67e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.16e-15 | 1 |
mesenchymal cell neoplasm | 1.73e-08 | 2 |