FFCP PHASE1:Hg19::chr1:243893553..243893562,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:243893553..243893562,+ | |||
|coexpression_cluster_id=C1176 | |||
|description=CAGE_peak_at_chr1:243893553..243893562,+ | |description=CAGE_peak_at_chr1:243893553..243893562,+ | ||
|id=chr1:243893553..243893562,+ | |id=chr1:243893553..243893562,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.47e-50!42;CL:0000860!1.16e-48!45;CL:0002009!4.29e-41!65;CL:0000763!5.21e-41!112;CL:0000049!5.21e-41!112;CL:0000766!8.08e-41!76;CL:0002194!8.41e-41!63;CL:0000576!8.41e-41!63;CL:0000040!8.41e-41!63;CL:0000559!8.41e-41!63;CL:0000557!3.85e-38!71;CL:0000839!4.92e-37!70;CL:0000037!1.37e-28!172;CL:0000566!1.37e-28!172;CL:0002032!4.22e-27!165;CL:0000837!4.22e-27!165;CL:0000988!6.70e-26!182;CL:0000738!2.08e-24!140;CL:0002087!1.33e-22!119;CL:0002031!6.71e-21!124;CL:0002393!7.81e-08!9;CL:0002397!7.81e-08!9 | |ontology_enrichment_celltype=CL:0002057!2.47e-50!42;CL:0000860!1.16e-48!45;CL:0002009!4.29e-41!65;CL:0000763!5.21e-41!112;CL:0000049!5.21e-41!112;CL:0000766!8.08e-41!76;CL:0002194!8.41e-41!63;CL:0000576!8.41e-41!63;CL:0000040!8.41e-41!63;CL:0000559!8.41e-41!63;CL:0000557!3.85e-38!71;CL:0000839!4.92e-37!70;CL:0000037!1.37e-28!172;CL:0000566!1.37e-28!172;CL:0002032!4.22e-27!165;CL:0000837!4.22e-27!165;CL:0000988!6.70e-26!182;CL:0000738!2.08e-24!140;CL:0002087!1.33e-22!119;CL:0002031!6.71e-21!124;CL:0002393!7.81e-08!9;CL:0002397!7.81e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-36;33!CL:0002057;1.36e-36;33!CL:0000473;3.36e-26;39!CL:0000234;3.36e-26;39!CL:0000576;4.91e-26;48!CL:0000766;2.28e-16;69!CL:0000763;6.78e-14;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.72e-36,108;CL:0000049,4.72e-36,108;CL:0000860,4.19e-35,42;CL:0002057,4.19e-35,42;CL:0002194,1.06e-33,59;CL:0000576,1.06e-33,59;CL:0000040,1.06e-33,59;CL:0000559,1.06e-33,59;CL:0002009,1.77e-32,61;CL:0000473,2.87e-30,48;CL:0000234,2.87e-30,48;CL:0000766,5.59e-30,72;CL:0000839,9.76e-30,66;CL:0000557,3.08e-29,67;CL:0002032,2.15e-24,161;CL:0000837,2.15e-24,161;CL:0000037,3.79e-23,168;CL:0000988,1.09e-21,177;CL:0002087,3.16e-17,115;CL:0002031,2.49e-16,120;CL:0000738,1.60e-15,136;CL:0000134,5.58e-08,354;CL:0002320,1.03e-07,361;CL:0000219,9.02e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-25;42!CL:0000049;3.11e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!2.29e-08!31;DOID:1240!7.80e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.20e-17;31!DOID:1240;5.48e-11;39!DOID:225;3.20e-07;1!DOID:2531;7.43e-07;51!DOID:0060083;7.43e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.23e-17,31;DOID:1240,1.23e-13,39;DOID:2531,3.76e-12,51;DOID:0060083,3.76e-12,51;DOID:225,3.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.20e-32!80;UBERON:0002390!4.32e-30!102;UBERON:0003061!4.32e-30!102;UBERON:0001474!5.67e-29!86;UBERON:0002193!5.45e-26!112;UBERON:0004765!1.41e-22!101;UBERON:0001434!1.41e-22!101;UBERON:0002405!4.02e-21!115;UBERON:0002204!1.25e-08!167;UBERON:0003081!8.75e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.54e-25,76;UBERON:0001474,3.49e-23,82;UBERON:0004765,9.03e-21,90;UBERON:0002405,5.68e-20,93;UBERON:0002390,9.50e-19,98;UBERON:0003061,9.50e-19,98;UBERON:0001434,2.71e-18,100;UBERON:0002193,1.22e-16,108;UBERON:0002204,2.52e-09,167;UBERON:0002384,2.39e-07,371;UBERON:0003081,5.82e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0.90361775633475,0,0,0,0,1.10799081706375,0,0.434021741431704,0.223915474239924,0,0.257575567634187,0.436194716338694,0.377875943688809,0.242584061187816,2.09186133215116,2.05583944010913,1.23882548358041,0.863077176966451,0.256160706529101,0,2.75796544589295,1.93645405075148,4.06279459783025,0.188242339542605,0.818718450173537,0.674170453335254,0.612167784741805,0.320929027076094,2.55734850319616,0.659702600373432,0.398927315243264,0.426224750532694,0.580418477257168,1.13477044938228,0.622822248995575,4.27122730936464,2.60741459210101,1.52032191293582,2.42159801053347,2.57794345191295,1.26584954976354,0.211255286311942,0.425208599930087,0.209658645508376,1.79725809834392,2.4028302854641,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0.773288812777695,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0.842391534340376,24.6493453355848,0.313359791546046,0,0,23.7670351153475,59.530913621359,7.23938604073555,1.37402137902306,21.8140942659005,37.130233910141,23.8594272648029,25.2050643068632,0,0,0,0,0,0.561421621224659,0,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0.556543525114529,3.62568523298871,0,0,0,0,0,0,0,0,0,16.8818882174868,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54416143458391,0,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0.751617097072463,0,0,0,0,0,0,0,0,0,3.3082498500553,0,0,0,0.219267951258557,0,0,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,1.12527203925513,0,0,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46842022703881,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0,0,3.52082707990665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,1.03973099535304,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.803892390468535,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0.90361775633475,0,0,0,0,1.10799081706375,0,0.434021741431704,0.223915474239924,0,0.257575567634187,0.436194716338694,0.377875943688809,0.242584061187816,2.09186133215116,2.05583944010913,1.23882548358041,0.863077176966451,0.256160706529101,0,2.75796544589295,1.93645405075148,4.06279459783025,0.188242339542605,0.818718450173537,0.674170453335254,0.612167784741805,0.320929027076094,2.55734850319616,0.659702600373432,0.398927315243264,0.426224750532694,0.580418477257168,1.13477044938228,0.622822248995575,4.27122730936464,2.60741459210101,1.52032191293582,2.42159801053347,2.57794345191295,1.26584954976354,0.211255286311942,0.425208599930087,0.209658645508376,1.79725809834392,2.4028302854641,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0.773288812777695,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0.842391534340376,24.6493453355848,0.313359791546046,0,0,23.7670351153475,59.530913621359,7.23938604073555,1.37402137902306,21.8140942659005,37.130233910141,23.8594272648029,25.2050643068632,0,0,0,0,0,0.561421621224659,0,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0.556543525114529,3.62568523298871,0,0,0,0,0,0,0,0,0,16.8818882174868,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54416143458391,0,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0.751617097072463,0,0,0,0,0,0,0,0,0,3.3082498500553,0,0,0,0.219267951258557,0,0,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,1.12527203925513,0,0,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46842022703881,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0,0,3.52082707990665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,1.03973099535304,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.803892390468535,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:243893553..243893562,+ | |short_description=p@chr1:243893553..243893562,+ | ||
}} | }} |
Latest revision as of 05:53, 28 July 2015
Short description: | p@chr1:243893553..243893562, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:243893553..243893562, + |
Coexpression cluster: | C1176_acute_biphenotypic_Adipocyte_myelodysplastic_Preadipocyte_CD14_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.72e-36 | 108 |
common myeloid progenitor | 4.72e-36 | 108 |
classical monocyte | 4.19e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.19e-35 | 42 |
monopoietic cell | 1.06e-33 | 59 |
monocyte | 1.06e-33 | 59 |
monoblast | 1.06e-33 | 59 |
promonocyte | 1.06e-33 | 59 |
macrophage dendritic cell progenitor | 1.77e-32 | 61 |
defensive cell | 2.87e-30 | 48 |
phagocyte | 2.87e-30 | 48 |
myeloid leukocyte | 5.59e-30 | 72 |
myeloid lineage restricted progenitor cell | 9.76e-30 | 66 |
granulocyte monocyte progenitor cell | 3.08e-29 | 67 |
hematopoietic oligopotent progenitor cell | 2.15e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-24 | 161 |
hematopoietic stem cell | 3.79e-23 | 168 |
hematopoietic cell | 1.09e-21 | 177 |
nongranular leukocyte | 3.16e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 2.49e-16 | 120 |
leukocyte | 1.60e-15 | 136 |
mesenchymal cell | 5.58e-08 | 354 |
connective tissue cell | 1.03e-07 | 361 |
motile cell | 9.02e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.54e-25 | 76 |
bone element | 3.49e-23 | 82 |
skeletal element | 9.03e-21 | 90 |
immune system | 5.68e-20 | 93 |
hematopoietic system | 9.50e-19 | 98 |
blood island | 9.50e-19 | 98 |
skeletal system | 2.71e-18 | 100 |
hemolymphoid system | 1.22e-16 | 108 |
musculoskeletal system | 2.52e-09 | 167 |
connective tissue | 2.39e-07 | 371 |
lateral plate mesoderm | 5.82e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.23e-17 | 31 |
leukemia | 1.23e-13 | 39 |
hematologic cancer | 3.76e-12 | 51 |
immune system cancer | 3.76e-12 | 51 |
syndrome | 3.20e-07 | 1 |