FFCP PHASE1:Hg19::chr1:247494515..247494540,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:247494515..247494540,- | |||
|description=CAGE_peak_at_chr1:247494515..247494540,- | |description=CAGE_peak_at_chr1:247494515..247494540,- | ||
|id=chr1:247494515..247494540,- | |id=chr1:247494515..247494540,- | ||
|ontology_enrichment_celltype=CL:0002319!3.43e-07!25;CL:0000066!6.63e-07!254;CL:0000080!7.10e-07!6;CL:0000548!9.52e-07!679;CL:0000004!9.52e-07!679;CL:0000255!9.52e-07!679 | |ontology_enrichment_celltype=CL:0002319!3.43e-07!25;CL:0000066!6.63e-07!254;CL:0000080!7.10e-07!6;CL:0000548!9.52e-07!679;CL:0000004!9.52e-07!679;CL:0000255!9.52e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000650;8.24e-22;2!CL:1000500;8.24e-22;2!CL:1000618;8.24e-22;2!CL:1001318;8.24e-22;2!CL:0002173;8.24e-22;2!CL:0000669;2.13e-11;4!CL:1000507;5.61e-10;10!CL:1000494;5.61e-10;10!CL:1000746;6.98e-07;7!CL:1000612;6.98e-07;7!CL:1000449;8.12e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,6.69e-22,2;CL:1000500,6.69e-22,2;CL:1000618,6.69e-22,2;CL:1001318,6.69e-22,2;CL:0002173,6.69e-22,2;CL:0000669,1.92e-11,4;CL:1000507,4.38e-10,10;CL:1000494,4.38e-10,10;CL:1000746,6.58e-07,7;CL:1000612,6.58e-07,7;CL:1000449,6.91e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.05e-08!235;DOID:14566!1.80e-07!239 | |ontology_enrichment_disease=DOID:162!8.05e-08!235;DOID:14566!1.80e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3371;8.62e-12;1!DOID:4549;8.62e-12;1!DOID:5861;8.62e-12;1!DOID:6496;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.76e-12,1;DOID:4549,7.76e-12,1;DOID:5861,7.76e-12,1;DOID:6496,7.76e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.15e-23;2!UBERON:0005058;9.15e-23;2!UBERON:0009113;9.15e-23;2!UBERON:0003567;8.24e-22;2!UBERON:0003838;8.24e-22;2!UBERON:0003586;8.24e-22;2!UBERON:0005169;8.24e-22;2!UBERON:0002321;8.24e-22;2!UBERON:0005215;8.24e-22;2!UBERON:0002303;8.24e-22;2!UBERON:0002319;8.24e-22;2!UBERON:0003891;2.13e-11;4!UBERON:0004211;5.61e-10;10!UBERON:0009773;5.61e-10;10!UBERON:0001231;5.61e-10;10!UBERON:0004810;5.61e-10;10!UBERON:0004177;1.12e-09;5!UBERON:0005057;1.12e-09;5!UBERON:0000074;6.98e-07;7!UBERON:0001229;6.98e-07;7!UBERON:0006555;8.12e-07;15!UBERON:0004819;8.12e-07;15!UBERON:0001285;8.12e-07;15!UBERON:0007684;8.12e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,6.69e-22,2;UBERON:0003838,6.69e-22,2;UBERON:0003586,6.69e-22,2;UBERON:0005169,6.69e-22,2;UBERON:0002321,6.69e-22,2;UBERON:0005215,6.69e-22,2;UBERON:0002303,6.69e-22,2;UBERON:0002319,6.69e-22,2;UBERON:0002370,6.98e-12,4;UBERON:0005058,6.98e-12,4;UBERON:0009113,6.98e-12,4;UBERON:0003295,6.98e-12,4;UBERON:0005562,6.98e-12,4;UBERON:0003891,1.92e-11,4;UBERON:0004810,4.38e-10,10;UBERON:0003351,3.27e-08,6;UBERON:0004177,3.72e-07,7;UBERON:0005057,3.72e-07,7;UBERON:0010532,6.58e-07,7;UBERON:0000074,6.58e-07,7;UBERON:0001229,6.58e-07,7;UBERON:0001230,6.58e-07,7;UBERON:0003220,6.58e-07,7;UBERON:0005749,6.58e-07,7;UBERON:0004199,6.58e-07,7;UBERON:0004209,6.58e-07,7;UBERON:0004198,6.58e-07,7;UBERON:0004211,6.91e-07,15;UBERON:0009773,6.91e-07,15;UBERON:0001231,6.91e-07,15;UBERON:0001285,6.91e-07,15;UBERON:0007684,6.91e-07,15;UBERON:0004208,6.91e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0.382067028739756,0.328402357799783,0.157421562627358,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,0,0.601633342410425,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0.863077176966451,1.0246428261164,0.47296445977717,0,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0.329851300186716,0.398927315243264,0,0,1.13477044938228,0,0.502497330513487,0,1.08594422352558,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0,0,0,0,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0.219500570817251,1.1240175325762,0.201057944823262,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0.264145302039678,0.207328115540772,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.76228387266739,1.30139853857622,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,0,0.200506470303285,0.368323955743585,0.229628896329213,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,1.46139224653261,0.105551628892876,0,0.170093705276516,0.431831832204279,0,1.08378575017541,1.50506932156456,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.768760269460425,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0.438450885253763,0,0,0.608731130888112,0,0.563391205064483,0,0.0982490410131212,0.35667105148125,0,0,0,0,0.349934720244983,0.192444225451024,0,1.08890984861323,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0.245040215981032,0,0,0.142283686696828,0.318852545457645,0.199579371432817,0,0.211673582723883,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,0,0.20453736500431,0.246169610922139,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0.236387681767936,0.689486746482929,0,0.520874984799877,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,2.04386596391473,0.156980256395025,0.166211681900156,0.225595660617181,0,0.335643173951685,0,0.317873157960757,0.210998064528027,0.326465616318295,0,0,0,0,0,3.55825354416746,0.86494757262552,0.730953646538188,0.067401132980677,0,0.234264445725339,0.182454789215666,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.694238953340524,0.195984794828755,0.0870592065804026,0,0,0,0.0730893170861856,0,0,1.1473296469895,0,0.137041924646751,0,0,0.195551382734803,0.240476460754601,0,0,0.144090417154106,0,0.171594997861965,0,0.124252535565433,0,0.135904206073614,0.523014231561666,0.203996435272644,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0.236349546921671,0.0824158583811665,0.337017719270924,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.39557285273876,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0.303298235083296,0,0.235265819698172,0.468334905806882,0.434763085832475,0.149254802886874,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.155262956876259,0,0,0,0.150257608997218,0,0.813741466409323,0,0.214821114084977,0,0,0,0,0,0,0,0,0.260994291965212,0,0.694567422971502,0.489473409012935,0.71635536432595,0,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0.345430341731199,0,0.138258436151731,0.389720617678777,0.132864840313363,0.163565394255844,0,0,0.211312123358627,0,0.106691729694141,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0.218419276384028,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.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| ||
|short_description=p@chr1:247494515..247494540,- | |short_description=p@chr1:247494515..247494540,- | ||
}} | }} |
Latest revision as of 06:09, 28 July 2015
Short description: | p@chr1:247494515..247494540, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:247494515..247494540, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 6.69e-22 | 2 |
kidney interstitial cell | 6.69e-22 | 2 |
juxtaglomerular complex cell | 6.69e-22 | 2 |
renal interstitial pericyte | 6.69e-22 | 2 |
extraglomerular mesangial cell | 6.69e-22 | 2 |
pericyte cell | 1.92e-11 | 4 |
kidney tubule cell | 4.38e-10 | 10 |
nephron tubule epithelial cell | 4.38e-10 | 10 |
glomerular cell | 6.58e-07 | 7 |
kidney corpuscule cell | 6.58e-07 | 7 |
epithelial cell of nephron | 6.91e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 6.69e-22 | 2 |
abdominal segment connective tissue | 6.69e-22 | 2 |
trunk connective tissue | 6.69e-22 | 2 |
interstitial tissue | 6.69e-22 | 2 |
extraglomerular mesangium | 6.69e-22 | 2 |
kidney interstitium | 6.69e-22 | 2 |
juxtaglomerular apparatus | 6.69e-22 | 2 |
mesangium | 6.69e-22 | 2 |
thymus | 6.98e-12 | 4 |
hemolymphoid system gland | 6.98e-12 | 4 |
thymic region | 6.98e-12 | 4 |
pharyngeal gland | 6.98e-12 | 4 |
thymus primordium | 6.98e-12 | 4 |
stroma | 1.92e-11 | 4 |
nephron tubule epithelium | 4.38e-10 | 10 |
pharyngeal epithelium | 3.27e-08 | 6 |
hemopoietic organ | 3.72e-07 | 7 |
immune organ | 3.72e-07 | 7 |
primitive nephron | 6.58e-07 | 7 |
renal glomerulus | 6.58e-07 | 7 |
renal corpuscle | 6.58e-07 | 7 |
glomerular capsule | 6.58e-07 | 7 |
metanephric mesenchyme | 6.58e-07 | 7 |
glomerular tuft | 6.58e-07 | 7 |
S-shaped body | 6.58e-07 | 7 |
renal vesicle | 6.58e-07 | 7 |
comma-shaped body | 6.58e-07 | 7 |
nephron epithelium | 6.91e-07 | 15 |
renal tubule | 6.91e-07 | 15 |
nephron tubule | 6.91e-07 | 15 |
nephron | 6.91e-07 | 15 |
uriniferous tubule | 6.91e-07 | 15 |
nephrogenic mesenchyme | 6.91e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.76e-12 | 1 |
extraosseous chondrosarcoma | 7.76e-12 | 1 |
myxoid chondrosarcoma | 7.76e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 7.76e-12 | 1 |