FFCP PHASE1:Hg19::chr1:78695298..78695311,+: Difference between revisions
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|id=chr1:78695298..78695311,+
|short_description=p1@ENST00000413519
|description=CAGE_peak_1_at_ENST00000413519_5end
|association_with_transcript=0bp_to_ENST0000041...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000413519_5end | |||
|cluster_id=chr1:78695298..78695311,+ | |||
|description=CAGE_peak_1_at_ENST00000413519_5end | |||
|id=chr1:78695298..78695311,+ | |||
|ontology_enrichment_celltype=CL:0000188!3.89e-14!9;CL:0002564!2.67e-09!3;CL:0000594!6.99e-09!3;CL:0002602!6.29e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002602;2.79e-23;2!CL:0000188;5.37e-20;9!CL:0000594;4.13e-16;3!CL:0002564;5.59e-16;3!CL:0000680;3.97e-15;7!CL:0002540;2.66e-08;6!CL:0002598;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,1.78e-23,2;CL:0000188,5.51e-20,9;CL:0000594,4.30e-16,3;CL:0002564,4.99e-16,3;CL:0002540,2.52e-08,6;CL:0002598,8.06e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002242!2.67e-09!3;UBERON:0003068!2.67e-09!3;UBERON:0002328!2.67e-09!3;UBERON:0004880!2.67e-09!3;UBERON:0009568!6.29e-07!2;UBERON:0002216!6.29e-07!2;UBERON:0002209!6.29e-07!2;UBERON:0002213!6.29e-07!2;UBERON:0004267!6.29e-07!2;UBERON:0006444!6.29e-07!2;UBERON:0001995!6.29e-07!2;UBERON:0004715!6.29e-07!2;UBERON:0001468!6.29e-07!2;UBERON:0001130!6.29e-07!2;UBERON:0001066!6.29e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;5.37e-36;5!UBERON:0002216;5.37e-36;5!UBERON:0011134;5.37e-36;5!UBERON:0002209;5.37e-36;5!UBERON:0002213;5.37e-36;5!UBERON:0007844;5.37e-36;5!UBERON:0011138;5.37e-36;5!UBERON:0001130;5.37e-36;5!UBERON:0001066;5.37e-36;5!UBERON:0001468;5.37e-36;5!UBERON:0006444;2.79e-23;2!UBERON:0001995;2.79e-23;2!UBERON:0004715;2.79e-23;2!UBERON:0004905;1.20e-22;8!UBERON:0000982;1.20e-22;8!UBERON:0004770;1.20e-22;8!UBERON:0001134;2.59e-17;16!UBERON:0002036;2.59e-17;16!UBERON:0002242;5.59e-16;3!UBERON:0002418;7.26e-16;3!UBERON:0004755;7.26e-16;3!UBERON:0004765;4.55e-15;26!UBERON:0002171;8.84e-13;1!UBERON:0006518;8.84e-13;1!UBERON:0008949;8.84e-13;1!UBERON:0000101;8.84e-13;1!UBERON:0002167;8.84e-13;1!UBERON:0000075;1.84e-11;16!UBERON:0002204;1.16e-10;70!UBERON:0002385;6.73e-09;31!UBERON:0001015;6.73e-09;31!UBERON:0000383;6.73e-09;31!UBERON:0001434;1.63e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.28e-36,5;UBERON:0002216,3.28e-36,5;UBERON:0011134,3.28e-36,5;UBERON:0002209,3.28e-36,5;UBERON:0002213,3.28e-36,5;UBERON:0005856,3.28e-36,5;UBERON:0005866,3.28e-36,5;UBERON:0005863,3.28e-36,5;UBERON:0007844,3.28e-36,5;UBERON:0011138,3.28e-36,5;UBERON:0001130,3.28e-36,5;UBERON:0001066,3.28e-36,5;UBERON:0001468,3.28e-36,5;UBERON:0006444,1.78e-23,2;UBERON:0001995,1.78e-23,2;UBERON:0004715,1.78e-23,2;UBERON:0004905,8.87e-23,8;UBERON:0000982,8.87e-23,8;UBERON:0004770,8.87e-23,8;UBERON:0002242,4.99e-16,3;UBERON:0003068,4.99e-16,3;UBERON:0002328,4.99e-16,3;UBERON:0004880,4.99e-16,3;UBERON:0002418,5.38e-16,3;UBERON:0004755,5.38e-16,3;UBERON:0002171,8.85e-13,1;UBERON:0006518,8.85e-13,1;UBERON:0008949,8.85e-13,1;UBERON:0000101,8.85e-13,1;UBERON:0002167,8.85e-13,1;UBERON:0000075,1.58e-11,16;UBERON:0002204,7.81e-08,167 | |||
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| ||
|short_description=p1@ENST00000413519 | |||
}} | }} |
Latest revision as of 10:31, 28 July 2015
Short description: | p1@ENST00000413519 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000413519_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000413519_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 1.78e-23 | 2 |
cell of skeletal muscle | 5.51e-20 | 9 |
skeletal muscle satellite cell | 4.30e-16 | 3 |
nucleus pulposus cell of intervertebral disc | 4.99e-16 | 3 |
mesenchymal stem cell of the bone marrow | 2.52e-08 | 6 |
bronchial smooth muscle cell | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 3.28e-36 | 5 |
symphysis | 3.28e-36 | 5 |
nonsynovial joint | 3.28e-36 | 5 |
fibrous joint | 3.28e-36 | 5 |
cartilaginous joint | 3.28e-36 | 5 |
developing mesenchymal condensation | 3.28e-36 | 5 |
pre-cartilage condensation | 3.28e-36 | 5 |
cartilaginous condensation | 3.28e-36 | 5 |
cartilage element | 3.28e-36 | 5 |
post-cranial axial skeletal system | 3.28e-36 | 5 |
vertebral column | 3.28e-36 | 5 |
intervertebral disk | 3.28e-36 | 5 |
intervertebral joint | 3.28e-36 | 5 |
annulus fibrosus | 1.78e-23 | 2 |
fibrocartilage | 1.78e-23 | 2 |
annulus fibrosus disci intervertebralis | 1.78e-23 | 2 |
articulation | 8.87e-23 | 8 |
skeletal joint | 8.87e-23 | 8 |
articular system | 8.87e-23 | 8 |
nucleus pulposus | 4.99e-16 | 3 |
axial mesoderm | 4.99e-16 | 3 |
notochord | 4.99e-16 | 3 |
chordamesoderm | 4.99e-16 | 3 |
cartilage tissue | 5.38e-16 | 3 |
skeletal tissue | 5.38e-16 | 3 |
lower lobe of right lung | 8.85e-13 | 1 |
right lung lobe | 8.85e-13 | 1 |
lower lobe of lung | 8.85e-13 | 1 |
lobe of lung | 8.85e-13 | 1 |
right lung | 8.85e-13 | 1 |
subdivision of skeletal system | 1.58e-11 | 16 |
musculoskeletal system | 7.81e-08 | 167 |