FFCP PHASE1:Hg19::chr20:1398073..1398096,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:1398073..1398096,- | |||
|description=CAGE_peak_at_chr20:1398073..1398096,- | |description=CAGE_peak_at_chr20:1398073..1398096,- | ||
|id=chr20:1398073..1398096,- | |id=chr20:1398073..1398096,- | ||
|ontology_enrichment_celltype=CL:0000066!1.64e-13!254;CL:0000220!4.54e-12!246;CL:0002321!7.79e-12!248;CL:0002076!3.40e-11!43;CL:0002159!2.70e-08!13;CL:0000223!3.47e-08!59;CL:0002368!3.75e-08!13;CL:0000548!2.97e-07!679;CL:0000004!2.97e-07!679;CL:0000255!2.97e-07!679;CL:0000012!4.31e-07!682;CL:0000144!5.58e-07!625;CL:0002621!6.71e-07!3;CL:0002166!9.01e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.64e-13!254;CL:0000220!4.54e-12!246;CL:0002321!7.79e-12!248;CL:0002076!3.40e-11!43;CL:0002159!2.70e-08!13;CL:0000223!3.47e-08!59;CL:0002368!3.75e-08!13;CL:0000548!2.97e-07!679;CL:0000004!2.97e-07!679;CL:0000255!2.97e-07!679;CL:0000012!4.31e-07!682;CL:0000144!5.58e-07!625;CL:0002621!6.71e-07!3;CL:0002166!9.01e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.13e-22;3!CL:0002166;1.74e-22;3!CL:0002368;3.57e-19;13!CL:0002076;3.22e-13;42!CL:0002159;7.81e-13;14!CL:0000307;2.37e-10;3!CL:0002202;1.37e-07;9!CL:0002632;1.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,6.52e-23,3;CL:0002166,2.10e-22,3;CL:0002368,3.20e-19,13;CL:0002076,1.49e-15,42;CL:0002159,6.74e-13,14;CL:0000223,8.38e-11,58;CL:0000068,3.47e-10,3;CL:0000069,3.47e-10,3;CL:0000307,3.47e-10,3;CL:0000377,3.47e-10,3;CL:0000066,1.15e-09,253;CL:0002321,1.36e-07,250;CL:0002202,1.55e-07,9;CL:0002632,1.55e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;2.37e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.20e-08;1!DOID:3165;2.20e-08;1!DOID:0060121;2.20e-08;1!DOID:2438;2.20e-08;1!DOID:4418;2.20e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.18e-08,1;DOID:3165,1.18e-08,1;DOID:0060121,1.18e-08,1;DOID:2438,1.18e-08,1;DOID:4418,1.18e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.13e-10!14;UBERON:0000158!3.13e-10!14;UBERON:0001949!6.71e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.13e-22;3!UBERON:0001708;5.12e-17;4!UBERON:0008895;5.12e-17;4!UBERON:0011159;1.00e-13;5!UBERON:0000486;4.55e-10;12!UBERON:0003929;4.97e-10;7!UBERON:0003350;7.79e-09;8!UBERON:0001828;7.79e-09;8!UBERON:0007195;8.77e-09;1!UBERON:0001851;1.07e-07;15!UBERON:0004765;8.23e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.52e-23,3;UBERON:0001708,5.88e-17,4;UBERON:0008895,5.88e-17,4;UBERON:0011159,1.12e-13,5;UBERON:0010188,1.74e-11,6;UBERON:0002539,1.74e-11,6;UBERON:0008816,1.74e-11,6;UBERON:0003350,6.39e-09,8;UBERON:0001828,6.39e-09,8;UBERON:0007195,1.02e-08,1;UBERON:0001851,1.17e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,1.31883489114227,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,1.50602959389125,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0.23486899728753,0.323745888736263,0.421352420106746,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0,0,0,0,0,0,2.51239109112286,1.90922284413584,5.73609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96325770603289,0,0.502644862058154,0.277765335475589,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,2.81201501960331,2.35174979478403,1.27597587518148,0.358234090811393,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,4.0101294060657,0.0920809889358963,0,0,0,1.35359883872224,0.693138033939733,0,0,0.316654886678627,0,1.53084334748864,0,0,0.270946437543853,0,1.01950509218015,0,0.223874754722178,0,0,0,0,0,0,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,1.4875642382488,1.72971060628596,2.67986696238627,0,0,0,0,0,0.532306030317022,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,1.58510321173008,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,1.08890984861323,0.0941438007767792,0,3.36942951335251,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,2.15012491469462,0,0,0.333926115068718,0,0,0,0,0,0.306806047506464,0,0,0.179736702294654,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0.554698692052555,0.173559738335131,0.0979923974143777,0.435296032902013,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,1.9871461170299,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.418411385249333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,1.34833881285112,0,0,0,0,0.489473409012935,0,0,0.219284049578707,0.530067437837643,0,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0.818859587550484,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,1.31883489114227,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,1.50602959389125,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0.23486899728753,0.323745888736263,0.421352420106746,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0,0,0,0,0,0,2.51239109112286,1.90922284413584,5.73609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96325770603289,0,0.502644862058154,0.277765335475589,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,2.81201501960331,2.35174979478403,1.27597587518148,0.358234090811393,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,4.0101294060657,0.0920809889358963,0,0,0,1.35359883872224,0.693138033939733,0,0,0.316654886678627,0,1.53084334748864,0,0,0.270946437543853,0,1.01950509218015,0,0.223874754722178,0,0,0,0,0,0,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,1.4875642382488,1.72971060628596,2.67986696238627,0,0,0,0,0,0.532306030317022,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,1.58510321173008,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,1.08890984861323,0.0941438007767792,0,3.36942951335251,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,2.15012491469462,0,0,0.333926115068718,0,0,0,0,0,0.306806047506464,0,0,0.179736702294654,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0.554698692052555,0.173559738335131,0.0979923974143777,0.435296032902013,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,1.9871461170299,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.418411385249333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,1.34833881285112,0,0,0,0,0.489473409012935,0,0,0.219284049578707,0.530067437837643,0,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0.818859587550484,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:1398073..1398096,- | |short_description=p@chr20:1398073..1398096,- | ||
}} | }} |
Latest revision as of 11:59, 28 July 2015
Short description: | p@chr20:1398073..1398096, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:1398073..1398096, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 6.52e-23 | 3 |
epithelial cell of Malassez | 2.10e-22 | 3 |
respiratory epithelial cell | 3.20e-19 | 13 |
endo-epithelial cell | 1.49e-15 | 42 |
general ecto-epithelial cell | 6.74e-13 | 14 |
endodermal cell | 8.38e-11 | 58 |
duct epithelial cell | 3.47e-10 | 3 |
branched duct epithelial cell | 3.47e-10 | 3 |
tracheal epithelial cell | 3.47e-10 | 3 |
tracheoblast | 3.47e-10 | 3 |
epithelial cell | 1.15e-09 | 253 |
embryonic cell | 1.36e-07 | 250 |
epithelial cell of tracheobronchial tree | 1.55e-07 | 9 |
epithelial cell of lower respiratory tract | 1.55e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.52e-23 | 3 |
jaw skeleton | 5.88e-17 | 4 |
splanchnocranium | 5.88e-17 | 4 |
primary subdivision of cranial skeletal system | 1.12e-13 | 5 |
protuberance | 1.74e-11 | 6 |
pharyngeal arch | 1.74e-11 | 6 |
embryonic head | 1.74e-11 | 6 |
epithelium of mucosa | 6.39e-09 | 8 |
gingiva | 6.39e-09 | 8 |
stroma of bone marrow | 1.02e-08 | 1 |
cortex | 1.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.18e-08 | 1 |
skin benign neoplasm | 1.18e-08 | 1 |
integumentary system benign neoplasm | 1.18e-08 | 1 |
dermis tumor | 1.18e-08 | 1 |
cutaneous fibrous histiocytoma | 1.18e-08 | 1 |