FFCP PHASE1:Hg19::chr22:35739706..35739737,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10043 | |EntrezGene=entrezgene:10043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11982 | |HGNC=HGNC:11982 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-441bp_to_ENST00000492723_5end | |association_with_transcript=-441bp_to_ENST00000492723_5end | ||
|cluster_id=chr22:35739706..35739737,+ | |||
|coexpression_cluster_id=C273 | |coexpression_cluster_id=C273 | ||
|description=CAGE_peak_4_at_TOM1_5end | |description=CAGE_peak_4_at_TOM1_5end | ||
Revision as of 20:35, 28 July 2015
| Short description: | p4@TOM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_TOM1_5end |
| Coexpression cluster: | C273_Neutrophils_CD14_Eosinophils_Monocytederived_CD4_Natural_Mast |
| Association with transcript: | -441bp_to_ENST00000492723_5end |
| EntrezGene: | 10043 |
| HGNC: | 11982 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@TOM1 |
|---|
0
10
20
30
40
50
60
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 2.43e-55 | 42 |
| CD14-positive, CD16-negative classical monocyte | 2.43e-55 | 42 |
| defensive cell | 1.64e-52 | 48 |
| phagocyte | 1.64e-52 | 48 |
| myeloid leukocyte | 2.04e-47 | 72 |
| macrophage dendritic cell progenitor | 3.44e-42 | 61 |
| leukocyte | 1.33e-41 | 136 |
| granulocyte monocyte progenitor cell | 1.58e-39 | 67 |
| monopoietic cell | 1.93e-39 | 59 |
| monocyte | 1.93e-39 | 59 |
Showing 1 to 10 of 30 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 2.45e-33 | 76 |
| hematopoietic system | 2.96e-30 | 98 |
| blood island | 2.96e-30 | 98 |
| bone element | 5.69e-30 | 82 |
| skeletal element | 3.45e-26 | 90 |
| hemolymphoid system | 3.65e-26 | 108 |
| immune system | 6.10e-25 | 93 |
| skeletal system | 1.46e-23 | 100 |
| connective tissue | 3.76e-12 | 371 |
| musculoskeletal system | 9.91e-11 | 167 |
Showing 1 to 10 of 11 entries
