FFCP PHASE1:Hg19::chr2:43452406..43452478,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:43452406..43452478,- to FFCP PHASE1:Hg19::chr2:43452406..43452478,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:43452406..43452478,- | |||
|coexpression_cluster_id=C767 | |||
|description=CAGE_peak_at_chr2:43452406..43452478,- | |||
|id=chr2:43452406..43452478,- | |||
|ontology_enrichment_celltype=CL:0000037!1.17e-10!172;CL:0000566!1.17e-10!172;CL:0000766!5.80e-10!76;CL:0000988!1.47e-09!182;CL:0000738!2.23e-09!140;CL:0002032!5.56e-09!165;CL:0000837!5.56e-09!165;CL:0000763!1.45e-08!112;CL:0000049!1.45e-08!112;CL:0002087!1.28e-07!119;CL:0002057!7.00e-07!42;CL:0000839!8.19e-07!70 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.37e-13,168;CL:0000988,2.68e-12,177;CL:0000738,5.51e-12,136;CL:0000766,6.13e-12,72;CL:0002032,1.61e-11,161;CL:0000837,1.61e-11,161;CL:0000763,2.39e-10,108;CL:0000049,2.39e-10,108;CL:0002087,1.31e-09,115;CL:0002320,1.21e-08,361;CL:0002031,1.21e-08,120;CL:0000839,3.43e-08,66;CL:0000557,3.87e-08,67;CL:0002194,9.44e-08,59;CL:0000576,9.44e-08,59;CL:0000040,9.44e-08,59;CL:0000559,9.44e-08,59;CL:0000473,1.32e-07,48;CL:0000234,1.32e-07,48;CL:0000134,5.00e-07,354;CL:0002009,5.02e-07,61;CL:0000791,5.71e-07,18;CL:0000789,5.71e-07,18;CL:0002420,5.71e-07,18;CL:0002419,5.71e-07,18;CL:0000790,5.71e-07,18;CL:0000860,6.04e-07,42;CL:0002057,6.04e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.68e-12!102;UBERON:0003061!4.68e-12!102;UBERON:0002193!1.49e-11!112;UBERON:0002371!1.50e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.03e-14,98;UBERON:0003061,5.03e-14,98;UBERON:0002193,2.81e-12,108;UBERON:0002405,4.82e-09,93;UBERON:0002371,6.83e-09,76;UBERON:0004765,7.00e-09,90;UBERON:0001434,1.63e-08,100;UBERON:0002384,5.43e-08,371;UBERON:0001474,1.11e-07,82 | |||
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| ||
|short_description=p@chr2:43452406..43452478,- | |||
}} | }} |
Latest revision as of 10:16, 29 July 2015
Short description: | p@chr2:43452406..43452478, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43452406..43452478, - |
Coexpression cluster: | C767_CD4_CD8_Neutrophils_Natural_Mast_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.37e-13 | 168 |
hematopoietic cell | 2.68e-12 | 177 |
leukocyte | 5.51e-12 | 136 |
myeloid leukocyte | 6.13e-12 | 72 |
hematopoietic oligopotent progenitor cell | 1.61e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-11 | 161 |
myeloid cell | 2.39e-10 | 108 |
common myeloid progenitor | 2.39e-10 | 108 |
nongranular leukocyte | 1.31e-09 | 115 |
connective tissue cell | 1.21e-08 | 361 |
hematopoietic lineage restricted progenitor cell | 1.21e-08 | 120 |
myeloid lineage restricted progenitor cell | 3.43e-08 | 66 |
granulocyte monocyte progenitor cell | 3.87e-08 | 67 |
monopoietic cell | 9.44e-08 | 59 |
monocyte | 9.44e-08 | 59 |
monoblast | 9.44e-08 | 59 |
promonocyte | 9.44e-08 | 59 |
defensive cell | 1.32e-07 | 48 |
phagocyte | 1.32e-07 | 48 |
mesenchymal cell | 5.00e-07 | 354 |
macrophage dendritic cell progenitor | 5.02e-07 | 61 |
mature alpha-beta T cell | 5.71e-07 | 18 |
alpha-beta T cell | 5.71e-07 | 18 |
immature T cell | 5.71e-07 | 18 |
mature T cell | 5.71e-07 | 18 |
immature alpha-beta T cell | 5.71e-07 | 18 |
classical monocyte | 6.04e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.04e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.03e-14 | 98 |
blood island | 5.03e-14 | 98 |
hemolymphoid system | 2.81e-12 | 108 |
immune system | 4.82e-09 | 93 |
bone marrow | 6.83e-09 | 76 |
skeletal element | 7.00e-09 | 90 |
skeletal system | 1.63e-08 | 100 |
connective tissue | 5.43e-08 | 371 |
bone element | 1.11e-07 | 82 |