FFCP PHASE1:Hg19::chr2:55254526..55254550,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:55254526..55254550,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr2:55254526..55254550,- | |description=CAGE_peak_at_chr2:55254526..55254550,- | ||
|id=chr2:55254526..55254550,- | |id=chr2:55254526..55254550,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.05e-34;1!UBERON:0006241;2.59e-12;3!UBERON:0003056;2.59e-12;3!UBERON:0003057;2.59e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.34e-41!57;UBERON:0005068!6.34e-41!57;UBERON:0006241!6.34e-41!57;UBERON:0007135!6.34e-41!57;UBERON:0001017!6.53e-39!82;UBERON:0000073!2.04e-38!94;UBERON:0001016!2.04e-38!94;UBERON:0005743!1.86e-36!86;UBERON:0002616!2.97e-34!59;UBERON:0002780!4.42e-33!41;UBERON:0001890!4.42e-33!41;UBERON:0006240!4.42e-33!41;UBERON:0000955!6.03e-33!69;UBERON:0006238!6.03e-33!69;UBERON:0003080!4.38e-32!42;UBERON:0002020!3.22e-30!34;UBERON:0003528!3.22e-30!34;UBERON:0001893!6.30e-30!34;UBERON:0003075!4.11e-29!86;UBERON:0007284!4.11e-29!86;UBERON:0002791!2.05e-28!33;UBERON:0007023!7.24e-28!115;UBERON:0002346!3.04e-27!90;UBERON:0001869!6.42e-27!32;UBERON:0002619!3.58e-23!22;UBERON:0001950!9.94e-23!20;UBERON:0003056!2.33e-22!61;UBERON:0000956!4.64e-22!25;UBERON:0000203!4.64e-22!25;UBERON:0000153!5.82e-19!129;UBERON:0007811!5.82e-19!129;UBERON:0004121!1.49e-18!169;UBERON:0000924!8.91e-18!173;UBERON:0006601!8.91e-18!173;UBERON:0000033!1.93e-17!123;UBERON:0000200!9.24e-12!6;UBERON:0003076!7.50e-10!15;UBERON:0003057!7.50e-10!15;UBERON:0002308!1.43e-09!9;UBERON:0000125!1.43e-09!9;UBERON:0004732!3.80e-09!13;UBERON:0002298!8.20e-09!8;UBERON:0001871!1.27e-08!7;UBERON:0004733!1.28e-07!12;UBERON:0002028!1.28e-07!12;UBERON:0007277!1.28e-07!12;UBERON:0000988!4.90e-07!3;UBERON:0000025!5.38e-07!194;UBERON:0002420!5.81e-07!9;UBERON:0007245!5.81e-07!9;UBERON:0010009!5.81e-07!9;UBERON:0010011!5.81e-07!9;UBERON:0000454!5.81e-07!9;UBERON:0006331!6.57e-07!3;UBERON:0002771!8.95e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003112;5.05e-34;1!UBERON:0000941;5.05e-34;1!UBERON:0001785;5.05e-34;1!UBERON:0002464;5.05e-34;1!UBERON:0004904;5.05e-34;1!UBERON:0011158;5.05e-34;1!UBERON:0001021;5.05e-34;1!UBERON:0003128;5.05e-34;1!UBERON:0001703;5.05e-34;1!UBERON:0002241;5.05e-34;1!UBERON:0000200;4.85e-23;6!UBERON:0001871;6.48e-20;6!UBERON:0002771;5.48e-18;2!UBERON:0003714;9.07e-18;2!UBERON:0002702;9.07e-18;2!UBERON:0005162;9.07e-18;2!UBERON:0000122;9.07e-18;2!UBERON:0001950;6.23e-15;20!UBERON:0002619;1.05e-13;22!UBERON:0001870;2.59e-12;3!UBERON:0002240;2.59e-12;3!UBERON:0005174;2.59e-12;3!UBERON:0001137;2.59e-12;3!UBERON:0000956;3.25e-12;25!UBERON:0000203;3.25e-12;25!UBERON:0002791;3.73e-10;32!UBERON:0001869;3.73e-10;32!UBERON:0001893;1.26e-09;34!UBERON:0003528;4.30e-09;34!UBERON:0002020;4.30e-09;34!UBERON:0011159;6.55e-08;5!UBERON:0001017;6.10e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.05e-34,1;UBERON:0001785,5.05e-34,1;UBERON:0002464,5.05e-34,1;UBERON:0004904,5.05e-34,1;UBERON:0001021,5.05e-34,1;UBERON:0003902,5.05e-34,1;UBERON:0005425,5.05e-34,1;UBERON:0003112,9.85e-34,1;UBERON:0011158,9.85e-34,1;UBERON:0003128,9.85e-34,1;UBERON:0001703,9.85e-34,1;UBERON:0002241,9.85e-34,1;UBERON:0004761,9.85e-34,1;UBERON:0009617,9.85e-34,1;UBERON:0000200,3.88e-23,6;UBERON:0001871,7.13e-20,6;UBERON:0002771,5.48e-18,2;UBERON:0002702,6.48e-18,2;UBERON:0003714,9.07e-18,2;UBERON:0005162,9.07e-18,2;UBERON:0000122,9.07e-18,2;UBERON:0005253,1.27e-17,2;UBERON:0001950,5.94e-15,20;UBERON:0002619,1.01e-13,22;UBERON:0001870,2.07e-12,3;UBERON:0002240,2.31e-12,3;UBERON:0005174,2.31e-12,3;UBERON:0001137,2.31e-12,3;UBERON:0000956,3.13e-12,25;UBERON:0000203,3.13e-12,25;UBERON:0003075,2.00e-10,82;UBERON:0007284,2.00e-10,82;UBERON:0002346,5.77e-10,86;UBERON:0001049,7.17e-10,56;UBERON:0005068,7.17e-10,56;UBERON:0006241,7.17e-10,56;UBERON:0007135,7.17e-10,56;UBERON:0002791,8.51e-10,32;UBERON:0001869,8.51e-10,32;UBERON:0001781,1.44e-09,4;UBERON:0001016,1.91e-09,89;UBERON:0010314,2.38e-09,132;UBERON:0003528,2.81e-09,34;UBERON:0002020,2.81e-09,34;UBERON:0001893,2.81e-09,34;UBERON:0003056,4.15e-09,61;UBERON:0010371,2.53e-08,104;UBERON:0011159,7.49e-08,5;UBERON:0002780,7.58e-08,41;UBERON:0001890,7.58e-08,41;UBERON:0003080,7.58e-08,41;UBERON:0006240,7.58e-08,41;UBERON:0007023,1.09e-07,114;UBERON:0001017,6.23e-07,81;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6 | |||
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|short_description=p@chr2:55254526..55254550,- | |short_description=p@chr2:55254526..55254550,- | ||
}} | }} |
Latest revision as of 10:55, 29 July 2015
Short description: | p@chr2:55254526..55254550, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:55254526..55254550, - |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data