FFCP PHASE1:Hg19::chr2:95719121..95719138,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:95719121..95719138,+ | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr2:95719121..95719138,+ | |description=CAGE_peak_at_chr2:95719121..95719138,+ | ||
|id=chr2:95719121..95719138,+ | |id=chr2:95719121..95719138,+ | ||
|ontology_enrichment_celltype=CL:0000239!7.28e-07!3;CL:1000615!7.28e-07!3;CL:0002306!7.28e-07!3 | |ontology_enrichment_celltype=CL:0000239!7.28e-07!3;CL:1000615!7.28e-07!3;CL:0002306!7.28e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000239;2.64e-11;3!CL:1000615;2.64e-11;3!CL:0002306;2.64e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.26e-11,3;CL:1000615,2.26e-11,3;CL:0002306,2.26e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.81e-09;1!UBERON:0009143;2.04e-09;1!UBERON:0006222;3.58e-09;1!UBERON:0005795;1.53e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-36!115;UBERON:0001049!3.10e-22!57;UBERON:0005068!3.10e-22!57;UBERON:0006241!3.10e-22!57;UBERON:0007135!3.10e-22!57;UBERON:0002616!6.36e-18!59;UBERON:0002780!1.42e-17!41;UBERON:0001890!1.42e-17!41;UBERON:0006240!1.42e-17!41;UBERON:0003080!5.27e-17!42;UBERON:0000955!1.66e-16!69;UBERON:0006238!1.66e-16!69;UBERON:0001893!3.99e-16!34;UBERON:0001017!4.72e-16!82;UBERON:0005743!7.13e-16!86;UBERON:0002791!3.79e-15!33;UBERON:0003075!7.79e-15!86;UBERON:0007284!7.79e-15!86;UBERON:0000073!1.19e-14!94;UBERON:0001016!1.19e-14!94;UBERON:0002020!1.63e-14!34;UBERON:0003528!1.63e-14!34;UBERON:0001869!8.88e-14!32;UBERON:0002346!9.26e-14!90;UBERON:0002619!2.42e-13!22;UBERON:0001950!9.02e-13!20;UBERON:0000153!2.89e-12!129;UBERON:0007811!2.89e-12!129;UBERON:0003056!7.98e-12!61;UBERON:0000956!2.35e-11!25;UBERON:0000203!2.35e-11!25;UBERON:0000033!9.07e-11!123;UBERON:0004121!3.57e-08!169;UBERON:0000924!9.42e-08!173;UBERON:0006601!9.42e-08!173;UBERON:0002298!1.19e-07!8;UBERON:0000200!3.09e-07!6;UBERON:0000064!3.45e-07!219;UBERON:0006853!7.28e-07!3;UBERON:0007685!7.28e-07!3;UBERON:0004134!7.28e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.08e-36!115;UBERON:0001049!3.10e-22!57;UBERON:0005068!3.10e-22!57;UBERON:0006241!3.10e-22!57;UBERON:0007135!3.10e-22!57;UBERON:0002616!6.36e-18!59;UBERON:0002780!1.42e-17!41;UBERON:0001890!1.42e-17!41;UBERON:0006240!1.42e-17!41;UBERON:0003080!5.27e-17!42;UBERON:0000955!1.66e-16!69;UBERON:0006238!1.66e-16!69;UBERON:0001893!3.99e-16!34;UBERON:0001017!4.72e-16!82;UBERON:0005743!7.13e-16!86;UBERON:0002791!3.79e-15!33;UBERON:0003075!7.79e-15!86;UBERON:0007284!7.79e-15!86;UBERON:0000073!1.19e-14!94;UBERON:0001016!1.19e-14!94;UBERON:0002020!1.63e-14!34;UBERON:0003528!1.63e-14!34;UBERON:0001869!8.88e-14!32;UBERON:0002346!9.26e-14!90;UBERON:0002619!2.42e-13!22;UBERON:0001950!9.02e-13!20;UBERON:0000153!2.89e-12!129;UBERON:0007811!2.89e-12!129;UBERON:0003056!7.98e-12!61;UBERON:0000956!2.35e-11!25;UBERON:0000203!2.35e-11!25;UBERON:0000033!9.07e-11!123;UBERON:0004121!3.57e-08!169;UBERON:0000924!9.42e-08!173;UBERON:0006601!9.42e-08!173;UBERON:0002298!1.19e-07!8;UBERON:0000200!3.09e-07!6;UBERON:0000064!3.45e-07!219;UBERON:0006853!7.28e-07!3;UBERON:0007685!7.28e-07!3;UBERON:0004134!7.28e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.18e-11;3!UBERON:0001033;1.18e-11;3!UBERON:0006853;2.64e-11;3!UBERON:0007685;2.64e-11;3!UBERON:0004134;2.64e-11;3!UBERON:0000941;1.81e-09;1!UBERON:0001785;1.81e-09;1!UBERON:0002464;1.81e-09;1!UBERON:0004904;1.81e-09;1!UBERON:0001021;1.81e-09;1!UBERON:0005795;7.26e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.15e-11,3;UBERON:0001033,1.15e-11,3;UBERON:0010056,1.15e-11,3;UBERON:0006853,2.26e-11,3;UBERON:0007685,2.26e-11,3;UBERON:0004134,2.26e-11,3;UBERON:0000941,1.89e-09,1;UBERON:0001785,1.89e-09,1;UBERON:0002464,1.89e-09,1;UBERON:0004904,1.89e-09,1;UBERON:0001021,1.89e-09,1;UBERON:0003902,1.89e-09,1;UBERON:0005425,1.89e-09,1;UBERON:0007023,8.93e-08,114 | |||
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| ||
|short_description=p@chr2:95719121..95719138,+ | |short_description=p@chr2:95719121..95719138,+ | ||
}} | }} |
Latest revision as of 13:11, 29 July 2015
Short description: | p@chr2:95719121..95719138, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:95719121..95719138, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.26e-11 | 3 |
kidney cortex tubule cell | 2.26e-11 | 3 |
epithelial cell of proximal tubule | 2.26e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.15e-11 | 3 |
gustatory system | 1.15e-11 | 3 |
future tongue | 1.15e-11 | 3 |
renal cortex tubule | 2.26e-11 | 3 |
region of nephron tubule | 2.26e-11 | 3 |
proximal tubule | 2.26e-11 | 3 |
cranial nerve II | 1.89e-09 | 1 |
cranial nerve | 1.89e-09 | 1 |
nerve trunk | 1.89e-09 | 1 |
nerve connecting eye with brain | 1.89e-09 | 1 |
nerve | 1.89e-09 | 1 |
retinal neural layer | 1.89e-09 | 1 |
presumptive neural retina | 1.89e-09 | 1 |
adult organism | 8.93e-08 | 114 |