FFCP PHASE1:Hg19::chr3:107843890..107843896,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:107843890..107843896,+ | |||
|coexpression_cluster_id=C1261 | |||
|description=CAGE_peak_at_chr3:107843890..107843896,+ | |description=CAGE_peak_at_chr3:107843890..107843896,+ | ||
|id=chr3:107843890..107843896,+ | |id=chr3:107843890..107843896,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.30e-87!172;CL:0000566!2.30e-87!172;CL:0000988!2.20e-81!182;CL:0002032!5.94e-81!165;CL:0000837!5.94e-81!165;CL:0000738!1.29e-76!140;CL:0002031!1.98e-65!124;CL:0002087!2.31e-64!119;CL:0000763!2.78e-39!112;CL:0000049!2.78e-39!112;CL:0000542!1.56e-38!53;CL:0000051!1.56e-38!53;CL:0000838!6.63e-38!52;CL:0000766!1.67e-28!76;CL:0002057!6.05e-28!42;CL:0000839!1.65e-25!70;CL:0000557!3.49e-25!71;CL:0000860!7.01e-25!45;CL:0002009!2.63e-24!65;CL:0002194!3.64e-23!63;CL:0000576!3.64e-23!63;CL:0000040!3.64e-23!63;CL:0000559!3.64e-23!63;CL:0000945!9.98e-21!24;CL:0000826!9.98e-21!24;CL:0000134!2.11e-16!358;CL:0000084!6.19e-16!25;CL:0000827!6.19e-16!25;CL:0000791!3.44e-15!18;CL:0000789!3.44e-15!18;CL:0002420!3.44e-15!18;CL:0002419!3.44e-15!18;CL:0000790!3.44e-15!18;CL:0002320!3.50e-15!365;CL:0000236!3.36e-14!14;CL:0000219!2.37e-11!390;CL:0000625!6.60e-10!11;CL:0000048!2.19e-08!430;CL:0000034!5.31e-08!444;CL:0000723!9.93e-08!436;CL:0000451!3.52e-07!10;CL:0002393!7.19e-07!9;CL:0002397!7.19e-07!9 | |ontology_enrichment_celltype=CL:0000037!2.30e-87!172;CL:0000566!2.30e-87!172;CL:0000988!2.20e-81!182;CL:0002032!5.94e-81!165;CL:0000837!5.94e-81!165;CL:0000738!1.29e-76!140;CL:0002031!1.98e-65!124;CL:0002087!2.31e-64!119;CL:0000763!2.78e-39!112;CL:0000049!2.78e-39!112;CL:0000542!1.56e-38!53;CL:0000051!1.56e-38!53;CL:0000838!6.63e-38!52;CL:0000766!1.67e-28!76;CL:0002057!6.05e-28!42;CL:0000839!1.65e-25!70;CL:0000557!3.49e-25!71;CL:0000860!7.01e-25!45;CL:0002009!2.63e-24!65;CL:0002194!3.64e-23!63;CL:0000576!3.64e-23!63;CL:0000040!3.64e-23!63;CL:0000559!3.64e-23!63;CL:0000945!9.98e-21!24;CL:0000826!9.98e-21!24;CL:0000134!2.11e-16!358;CL:0000084!6.19e-16!25;CL:0000827!6.19e-16!25;CL:0000791!3.44e-15!18;CL:0000789!3.44e-15!18;CL:0002420!3.44e-15!18;CL:0002419!3.44e-15!18;CL:0000790!3.44e-15!18;CL:0002320!3.50e-15!365;CL:0000236!3.36e-14!14;CL:0000219!2.37e-11!390;CL:0000625!6.60e-10!11;CL:0000048!2.19e-08!430;CL:0000034!5.31e-08!444;CL:0000723!9.93e-08!436;CL:0000451!3.52e-07!10;CL:0002393!7.19e-07!9;CL:0002397!7.19e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.98e-29;53!CL:0000945;3.90e-27;24!CL:0002087;2.13e-24;104!CL:0000860;5.79e-24;33!CL:0002057;5.79e-24;33!CL:0000084;3.89e-21;25!CL:0000791;1.08e-19;18!CL:0000789;1.08e-19;18!CL:0002419;1.08e-19;18!CL:0000576;4.12e-18;48!CL:0000236;1.42e-17;13!CL:0000738;9.37e-17;136!CL:0000473;1.61e-16;39!CL:0000234;1.61e-16;39!CL:0000988;4.77e-15;177!CL:0000766;2.15e-13;69!CL:0000625;1.14e-12;11!CL:0000763;2.64e-11;100!CL:0000624;4.10e-08;6!CL:0000219;5.64e-08;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.75e-96,168;CL:0000988,7.52e-89,177;CL:0002032,7.90e-88,161;CL:0000837,7.90e-88,161;CL:0000738,2.86e-87,136;CL:0002087,1.40e-76,115;CL:0002031,4.39e-74,120;CL:0000542,2.02e-51,53;CL:0000051,2.02e-51,53;CL:0000838,1.40e-50,52;CL:0000763,4.57e-36,108;CL:0000049,4.57e-36,108;CL:0000860,1.15e-33,42;CL:0002057,1.15e-33,42;CL:0000473,4.81e-29,48;CL:0000234,4.81e-29,48;CL:0000766,3.16e-27,72;CL:0000945,4.04e-27,24;CL:0000826,4.04e-27,24;CL:0002009,1.33e-24,61;CL:0000134,1.81e-24,354;CL:0000839,2.34e-23,66;CL:0002320,3.07e-23,361;CL:0000557,3.49e-23,67;CL:0002194,3.65e-23,59;CL:0000576,3.65e-23,59;CL:0000040,3.65e-23,59;CL:0000559,3.65e-23,59;CL:0000084,3.69e-21,25;CL:0000827,3.69e-21,25;CL:0000791,1.00e-19,18;CL:0000789,1.00e-19,18;CL:0002420,1.00e-19,18;CL:0002419,1.00e-19,18;CL:0000790,1.00e-19,18;CL:0000219,5.83e-19,386;CL:0000236,2.10e-18,14;CL:0000034,2.45e-14,441;CL:0000048,2.63e-14,427;CL:0000723,1.30e-13,433;CL:0000625,1.11e-12,11;CL:0002393,1.21e-08,9;CL:0002397,1.21e-08,9;CL:0000624,3.95e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.98e-29;53!CL:0002057;2.88e-24;42!CL:0000790;1.08e-19;18!CL:0000049;3.17e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!2.94e-14!51;DOID:0060083!2.94e-14!51;DOID:1240!4.64e-10!39;DOID:8692!5.68e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.08e-09;51!DOID:0060083;1.08e-09;51!DOID:1240;3.68e-08;39!DOID:0060058;8.94e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.26e-14,51;DOID:0060083,1.26e-14,51;DOID:1240,8.10e-10,39;DOID:0060058,9.10e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.75e-32!102;UBERON:0003061!1.75e-32!102;UBERON:0002193!2.09e-31!112;UBERON:0002371!6.25e-22!80;UBERON:0001474!7.22e-19!86;UBERON:0002405!5.92e-17!115;UBERON:0002384!1.50e-13!375;UBERON:0004765!5.07e-13!101;UBERON:0001434!5.07e-13!101;UBERON:0000178!1.28e-07!15;UBERON:0000179!1.28e-07!15;UBERON:0000463!1.28e-07!15;UBERON:0003081!4.80e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.74e-08;15!UBERON:0000179;9.74e-08;15!UBERON:0000463;9.74e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.73e-32,98;UBERON:0003061,2.73e-32,98;UBERON:0002193,1.21e-29,108;UBERON:0002405,4.74e-23,93;UBERON:0002384,1.43e-21,371;UBERON:0002371,8.79e-21,76;UBERON:0001474,3.70e-18,82;UBERON:0004765,3.03e-15,90;UBERON:0001434,2.52e-12,100;UBERON:0000178,9.97e-08,15;UBERON:0000179,9.97e-08,15;UBERON:0000463,9.97e-08,15;UBERON:0004177,7.96e-07,7;UBERON:0005057,7.96e-07,7;UBERON:0003081,8.30e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9704018013218,13.8749996170408,16.0569993879906,24.781949441481,31.4740106439714,25.8542925937847,0,0,0,35.7898466680994,39.5230466315032,14.6800219667424,45.9816189081458,21.0571669843649,28.4284240637766,0.223915474239924,2.26725566213286,0.257575567634187,3.34415949192999,3.02300754951048,3.39617685662943,9.99444858694444,13.5685403047203,21.060033220867,33.9477022940138,25.1037492398519,60.3029686215892,43.0932100920773,31.6287494956075,50.1078000399065,2.82363509313907,3.27487380069415,6.74170453335254,21.4258724659632,15.0836642725764,28.7701706609569,5.60747210317417,6.78176435913548,5.54092175692502,58.9124754416026,55.0363667950406,60.4137581525708,18.592401228999,27.1171117578505,44.0893354751387,37.5347691632689,68.1313626576995,89.5588556457703,2.11255286311942,7.65375479874157,5.87044207423452,0.673971786878971,1.05123824989054,0.803627933485401,10.8304842621674,13.1285006951399,13.8824756861122,93.278009564501,103.220197528543,112.967675240671,75.1045191717053,116.114836240444,108.628211151397,85.9358334620321,126.889149353203,142.872455246472,129.779418850977,140.676547950084,19.8256992868539,45.961702164486,8.16490662802739,73.9628735628012,26.7247318669432,27.3449993669347,24.409228327039,43.0217391956339,45.9244371562691,19.4826728407911,24.398890057853,28.871378932534,28.7994062958707,22.7475245562613,13.3214972514702,15.997299749865,29.9276986378691,32.0566020631584,37.6744011455568,47.3034136486973,52.9730839617632,27.179236189294,26.8543142193232,50.5851051554536,52.2313717133597,40.73617041514,26.7594948032241,29.2987554235388,21.8603970223126,30.2655989346323,31.8686661774502,37.4792179657038,28.650047497326,23.8127119107104,42.942236306868,18.453373509062,29.9786516037394,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0.97364218096405,0.696518949197069,0.531831842075461,91.341909108946,107.535043226664,121.466602934768,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.357198913136319,0.44905874525234,0,0,0,0,15.8136500923276,11.6334079244498,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.09098448236334,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3975442689765,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0.743155811443641,0,0,0,0,0,0,1.97065295158377,0.088048434013226,1.03664057770386,0.864719720501769,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,4.9317463357152,32.510075433318,26.0909365580016,28.3638110178244,0,0,0,0,0,10.4860983352606,0,10.7748033493369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1918590563778,21.5714200818617,12.8073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385076685522074,0,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0,1.97333888981341,1.0457418040996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,1.239293992399,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0.86101074534246,1.68471475667626,0,1.83778720165568,9.64150457541122,8.41100927856613,7.97506062043828,16.4379925065874,11.5181436464134,8.43015304550532,7.02040868409549,7.9312517629427,0,0,0.245040215981032,13.7494349593032,55.2551085699784,22.1251132813568,12.9135280910346,10.5777066859393,11.2988168378096,16.298865869739,1.29848776109822,9.26630687774414,0,6.26719583092093,5.01268954180134,4.57087800064329,0,0,0.425846237690326,1.03051603426729,0,0,0,0.390776190804081,0.556812347790485,6.15436994738562,4.32729085561573,0.99921590399346,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.56480138146558,0,0,31.0173709761895,0,0.179736702294654,0,0,0.493217028184668,7.18449277040819,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34636466614658,0,0.31900115973192,0,0,24.5263915669768,1.09886179476517,6.4822555941061,1.35357396370308,0.19606253431774,1.84603745673427,1.13852239634511,6.83427289615628,0,0,0,0,1.99052386215701,0.353830258013357,3.66618086960175,0.296521128680622,0.247127877893006,0,0.067401132980677,0,0,16.7858406078413,0,0,0,3.62972148145992,0.30607276163049,0.568679216656392,1.05226393590145,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0,0,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30929650270355,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,15.5798931001043,0,0,0,0,0,13.948381276193,9.2856234546954,0,0,0.315222829196793,0.104909176269996,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,5.17182880720835,0,0,0,0,0,0,0,0,0.320362237703084,0.471612915298998,0.414239055347196,17.3658107634183,7.90446527591777,25.0892752664646,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0,0,0,0.18628920882415,0,0,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| ||
|short_description=p@chr3:107843890..107843896,+ | |short_description=p@chr3:107843890..107843896,+ | ||
}} | }} |
Latest revision as of 14:04, 29 July 2015
Short description: | p@chr3:107843890..107843896, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:107843890..107843896, + |
Coexpression cluster: | C1261_Dendritic_CD19_CD4_CD8_CD14_Natural_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.73e-32 | 98 |
blood island | 2.73e-32 | 98 |
hemolymphoid system | 1.21e-29 | 108 |
immune system | 4.74e-23 | 93 |
connective tissue | 1.43e-21 | 371 |
bone marrow | 8.79e-21 | 76 |
bone element | 3.70e-18 | 82 |
skeletal element | 3.03e-15 | 90 |
skeletal system | 2.52e-12 | 100 |
blood | 9.97e-08 | 15 |
haemolymphatic fluid | 9.97e-08 | 15 |
organism substance | 9.97e-08 | 15 |
hemopoietic organ | 7.96e-07 | 7 |
immune organ | 7.96e-07 | 7 |
lateral plate mesoderm | 8.30e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.26e-14 | 51 |
immune system cancer | 1.26e-14 | 51 |
leukemia | 8.10e-10 | 39 |
lymphoma | 9.10e-07 | 10 |