FFCP PHASE1:Hg19::chr3:14526619..14526634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:14526619..14526634,+ | |||
|coexpression_cluster_id=C4289 | |||
|description=CAGE_peak_at_chr3:14526619..14526634,+ | |description=CAGE_peak_at_chr3:14526619..14526634,+ | ||
|id=chr3:14526619..14526634,+ | |id=chr3:14526619..14526634,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.79e-26!76;CL:0002057!9.15e-24!42;CL:0002194!1.53e-23!63;CL:0000576!1.53e-23!63;CL:0000040!1.53e-23!63;CL:0000559!1.53e-23!63;CL:0002009!4.98e-23!65;CL:0000860!1.05e-22!45;CL:0000557!5.57e-21!71;CL:0000839!1.32e-20!70;CL:0000738!1.48e-19!140;CL:0000763!2.48e-19!112;CL:0000049!2.48e-19!112;CL:0002087!2.31e-16!119;CL:0002032!2.71e-16!165;CL:0000837!2.71e-16!165;CL:0000988!5.32e-16!182;CL:0000037!2.71e-15!172;CL:0000566!2.71e-15!172;CL:0002031!6.73e-15!124 | |ontology_enrichment_celltype=CL:0000766!1.79e-26!76;CL:0002057!9.15e-24!42;CL:0002194!1.53e-23!63;CL:0000576!1.53e-23!63;CL:0000040!1.53e-23!63;CL:0000559!1.53e-23!63;CL:0002009!4.98e-23!65;CL:0000860!1.05e-22!45;CL:0000557!5.57e-21!71;CL:0000839!1.32e-20!70;CL:0000738!1.48e-19!140;CL:0000763!2.48e-19!112;CL:0000049!2.48e-19!112;CL:0002087!2.31e-16!119;CL:0002032!2.71e-16!165;CL:0000837!2.71e-16!165;CL:0000988!5.32e-16!182;CL:0000037!2.71e-15!172;CL:0000566!2.71e-15!172;CL:0002031!6.73e-15!124 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.55e-35;39!CL:0000234;6.55e-35;39!CL:0000860;1.85e-34;33!CL:0002057;1.85e-34;33!CL:0000576;1.42e-20;48!CL:0000766;8.57e-19;69!CL:0000235;3.89e-10;6!CL:0000763;4.74e-09;100!CL:0000094;8.59e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.05e-46,48;CL:0000234,5.05e-46,48;CL:0000766,3.15e-45,72;CL:0002194,4.31e-43,59;CL:0000576,4.31e-43,59;CL:0000040,4.31e-43,59;CL:0000559,4.31e-43,59;CL:0002009,3.08e-41,61;CL:0000860,1.19e-37,42;CL:0002057,1.19e-37,42;CL:0000839,4.28e-37,66;CL:0000557,2.43e-36,67;CL:0000763,2.70e-30,108;CL:0000049,2.70e-30,108;CL:0000738,4.52e-23,136;CL:0002087,6.14e-20,115;CL:0002032,7.40e-18,161;CL:0000837,7.40e-18,161;CL:0002031,1.67e-17,120;CL:0000988,1.96e-17,177;CL:0000037,2.46e-17,168;CL:0000235,5.89e-10,6;CL:0000094,1.12e-07,8;CL:0000134,4.07e-07,354;CL:0002320,5.02e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.22e-28;42!CL:0000049;5.13e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.21e-20!80;UBERON:0002390!4.66e-19!102;UBERON:0003061!4.66e-19!102;UBERON:0001474!2.05e-16!86;UBERON:0002193!6.45e-15!112;UBERON:0004765!6.36e-13!101;UBERON:0001434!6.36e-13!101;UBERON:0002405!1.71e-09!115;UBERON:0003081!3.93e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-33,76;UBERON:0001474,3.20e-30,82;UBERON:0002390,9.48e-30,98;UBERON:0003061,9.48e-30,98;UBERON:0004765,1.39e-27,90;UBERON:0002193,1.33e-25,108;UBERON:0002405,5.03e-25,93;UBERON:0001434,1.93e-23,100;UBERON:0003081,5.20e-12,203;UBERON:0002204,3.19e-10,167 | |||
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| ||
|short_description=p@chr3:14526619..14526634,+ | |short_description=p@chr3:14526619..14526634,+ | ||
}} | }} |
Latest revision as of 16:36, 29 July 2015
Short description: | p@chr3:14526619..14526634, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:14526619..14526634, + |
Coexpression cluster: | C4289_CD14_Eosinophils_Olfactory_Neutrophils_mucinous_Monocytederived_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.05e-46 | 48 |
phagocyte | 5.05e-46 | 48 |
myeloid leukocyte | 3.15e-45 | 72 |
monopoietic cell | 4.31e-43 | 59 |
monocyte | 4.31e-43 | 59 |
monoblast | 4.31e-43 | 59 |
promonocyte | 4.31e-43 | 59 |
macrophage dendritic cell progenitor | 3.08e-41 | 61 |
classical monocyte | 1.19e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-37 | 42 |
myeloid lineage restricted progenitor cell | 4.28e-37 | 66 |
granulocyte monocyte progenitor cell | 2.43e-36 | 67 |
myeloid cell | 2.70e-30 | 108 |
common myeloid progenitor | 2.70e-30 | 108 |
leukocyte | 4.52e-23 | 136 |
nongranular leukocyte | 6.14e-20 | 115 |
hematopoietic oligopotent progenitor cell | 7.40e-18 | 161 |
hematopoietic multipotent progenitor cell | 7.40e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 1.67e-17 | 120 |
hematopoietic cell | 1.96e-17 | 177 |
hematopoietic stem cell | 2.46e-17 | 168 |
macrophage | 5.89e-10 | 6 |
granulocyte | 1.12e-07 | 8 |
mesenchymal cell | 4.07e-07 | 354 |
connective tissue cell | 5.02e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.05e-33 | 76 |
bone element | 3.20e-30 | 82 |
hematopoietic system | 9.48e-30 | 98 |
blood island | 9.48e-30 | 98 |
skeletal element | 1.39e-27 | 90 |
hemolymphoid system | 1.33e-25 | 108 |
immune system | 5.03e-25 | 93 |
skeletal system | 1.93e-23 | 100 |
lateral plate mesoderm | 5.20e-12 | 203 |
musculoskeletal system | 3.19e-10 | 167 |