FFCP PHASE1:Hg19::chr3:169801896..169801897,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:169801896..169801897,- | |||
|description=CAGE_peak_at_chr3:169801896..169801897,- | |description=CAGE_peak_at_chr3:169801896..169801897,- | ||
|id=chr3:169801896..169801897,- | |id=chr3:169801896..169801897,- | ||
|ontology_enrichment_celltype=CL:0002322!2.41e-09!5;CL:0000037!3.04e-09!172;CL:0000566!3.04e-09!172;CL:0002032!8.07e-09!165;CL:0000837!8.07e-09!165;CL:0000988!3.77e-08!182 | |ontology_enrichment_celltype=CL:0002322!2.41e-09!5;CL:0000037!3.04e-09!172;CL:0000566!3.04e-09!172;CL:0002032!8.07e-09!165;CL:0000837!8.07e-09!165;CL:0000988!3.77e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.56e-12;2!CL:0000775;8.63e-09;3!CL:0000239;1.21e-08;3!CL:1000615;1.21e-08;3!CL:0002306;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.65e-12,2;CL:0000775,8.31e-09,3;CL:0000239,1.12e-08,3;CL:1000615,1.12e-08,3;CL:0002306,1.12e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.42e-11!51;DOID:0060083!5.42e-11!51;DOID:1240!4.07e-10!39;DOID:162!1.99e-08!235;DOID:14566!5.42e-08!239;DOID:0050686!2.76e-07!137 | |ontology_enrichment_disease=DOID:2531!5.42e-11!51;DOID:0060083!5.42e-11!51;DOID:1240!4.07e-10!39;DOID:162!1.99e-08!235;DOID:14566!5.42e-08!239;DOID:0050686!2.76e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:630;3.28e-23;1!DOID:0050177;3.28e-23;1!DOID:0050427;3.28e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.67e-23,1;DOID:0050177,1.67e-23,1;DOID:0050427,1.67e-23,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.56e-12;2!UBERON:0004801;1.56e-12;2!UBERON:0006853;1.21e-08;3!UBERON:0007685;1.21e-08;3!UBERON:0004134;1.21e-08;3!UBERON:0002114;1.21e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.65e-12,2;UBERON:0004801,1.65e-12,2;UBERON:0006853,1.12e-08,3;UBERON:0007685,1.12e-08,3;UBERON:0004134,1.12e-08,3;UBERON:0002114,1.21e-08,2 | |||
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| ||
|short_description=p@chr3:169801896..169801897,- | |short_description=p@chr3:169801896..169801897,- | ||
}} | }} |
Latest revision as of 18:07, 29 July 2015
Short description: | p@chr3:169801896..169801897, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:169801896..169801897, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.65e-12 | 2 |
neutrophil | 8.31e-09 | 3 |
brush border epithelial cell | 1.12e-08 | 3 |
kidney cortex tubule cell | 1.12e-08 | 3 |
epithelial cell of proximal tubule | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.65e-12 | 2 |
cervix epithelium | 1.65e-12 | 2 |
renal cortex tubule | 1.12e-08 | 3 |
region of nephron tubule | 1.12e-08 | 3 |
proximal tubule | 1.12e-08 | 3 |
duodenum | 1.21e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.67e-23 | 1 |
monogenic disease | 1.67e-23 | 1 |
xeroderma pigmentosum | 1.67e-23 | 1 |