FFCP PHASE1:Hg19::chr3:196229754..196229771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:196229754..196229771,+ | |||
|coexpression_cluster_id=C427 | |coexpression_cluster_id=C427 | ||
|description=CAGE_peak_at_chr3:196229754..196229771,+ | |description=CAGE_peak_at_chr3:196229754..196229771,+ | ||
Latest revision as of 19:50, 29 July 2015
| Short description: | p@chr3:196229754..196229771, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:196229754..196229771, + |
| Coexpression cluster: | C427_Eosinophils_CD4_Peripheral_Neutrophils_Basophils_mature_Mast |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr3:196229754..196229771+ |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 1.35e-71 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.35e-71 | 42 |
| myeloid leukocyte | 5.06e-65 | 72 |
| defensive cell | 2.26e-64 | 48 |
| phagocyte | 2.26e-64 | 48 |
| leukocyte | 6.81e-63 | 136 |
| macrophage dendritic cell progenitor | 9.05e-53 | 61 |
| granulocyte monocyte progenitor cell | 5.25e-52 | 67 |
| monopoietic cell | 4.93e-49 | 59 |
| monocyte | 4.93e-49 | 59 |
Showing 1 to 10 of 43 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 1.01e-46 | 76 |
| hematopoietic system | 5.00e-45 | 98 |
| blood island | 5.00e-45 | 98 |
| bone element | 2.24e-42 | 82 |
| hemolymphoid system | 1.54e-39 | 108 |
| immune system | 9.91e-38 | 93 |
| skeletal element | 1.77e-37 | 90 |
| skeletal system | 1.84e-32 | 100 |
| lateral plate mesoderm | 5.71e-19 | 203 |
| connective tissue | 5.54e-18 | 371 |
Showing 1 to 10 of 14 entries
