FFCP PHASE1:Hg19::chr3:28617858..28617911,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000443912_5end | |||
|cluster_id=chr3:28617858..28617911,+ | |||
|coexpression_cluster_id=C1428 | |||
|description=CAGE_peak_1_at_ENST00000443912_5end | |||
|id=chr3:28617858..28617911,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.12e-07!6;CL:0000031!1.12e-07!6;CL:0000404!1.12e-07!6;CL:0000047!1.45e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.16e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.12e-18;82!UBERON:0006241;1.33e-10;3!UBERON:0003057;1.33e-10;3!UBERON:0010122;5.23e-07;2 | |||
|ontology_enrichment_disease=DOID:171!8.03e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:171;4.18e-10;10!DOID:169;4.77e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.73e-10,10;DOID:169,4.74e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.90e-55!57;UBERON:0005068!2.90e-55!57;UBERON:0006241!2.90e-55!57;UBERON:0007135!2.90e-55!57;UBERON:0000073!4.38e-55!94;UBERON:0001016!4.38e-55!94;UBERON:0001017!5.06e-54!82;UBERON:0005743!3.65e-52!86;UBERON:0007023!6.03e-52!115;UBERON:0002616!5.34e-45!59;UBERON:0002780!9.63e-44!41;UBERON:0001890!9.63e-44!41;UBERON:0006240!9.63e-44!41;UBERON:0002346!1.98e-42!90;UBERON:0003080!2.14e-42!42;UBERON:0000955!3.06e-41!69;UBERON:0006238!3.06e-41!69;UBERON:0003075!2.68e-38!86;UBERON:0007284!2.68e-38!86;UBERON:0002020!1.57e-35!34;UBERON:0003528!1.57e-35!34;UBERON:0001893!3.66e-35!34;UBERON:0002791!6.84e-34!33;UBERON:0001869!1.84e-32!32;UBERON:0000924!2.92e-32!173;UBERON:0006601!2.92e-32!173;UBERON:0004121!4.72e-29!169;UBERON:0003056!1.57e-26!61;UBERON:0000956!5.27e-23!25;UBERON:0000203!5.27e-23!25;UBERON:0000153!8.35e-23!129;UBERON:0007811!8.35e-23!129;UBERON:0000033!1.16e-22!123;UBERON:0002619!1.27e-22!22;UBERON:0001950!8.48e-20!20;UBERON:0002308!2.12e-14!9;UBERON:0000125!2.12e-14!9;UBERON:0003076!1.53e-13!15;UBERON:0003057!1.53e-13!15;UBERON:0000025!8.17e-13!194;UBERON:0009663!2.20e-11!7;UBERON:0002420!3.80e-11!9;UBERON:0007245!3.80e-11!9;UBERON:0010009!3.80e-11!9;UBERON:0010011!3.80e-11!9;UBERON:0000454!3.80e-11!9;UBERON:0000922!7.05e-11!612;UBERON:0004111!1.84e-10!241;UBERON:0002298!4.19e-10!8;UBERON:0001894!6.33e-10!7;UBERON:0006222!6.33e-10!7;UBERON:0004733!2.05e-09!12;UBERON:0002028!2.05e-09!12;UBERON:0007277!2.05e-09!12;UBERON:0000477!2.05e-09!286;UBERON:0000475!2.19e-09!365;UBERON:0000200!2.43e-09!6;UBERON:0000468!5.45e-09!659;UBERON:0002050!5.66e-09!605;UBERON:0005423!5.66e-09!605;UBERON:0000923!1.35e-08!604;UBERON:0005291!1.35e-08!604;UBERON:0006598!1.35e-08!604;UBERON:0002532!1.35e-08!604;UBERON:0004732!1.64e-08!13;UBERON:0000013!5.95e-08!5;UBERON:0002410!5.95e-08!5;UBERON:0000483!8.87e-08!309;UBERON:0000064!1.32e-07!219;UBERON:0001872!1.46e-07!5;UBERON:0000119!1.58e-07!312;UBERON:0000481!1.75e-07!347;UBERON:0000369!3.21e-07!4;UBERON:0002435!3.21e-07!4;UBERON:0000204!3.21e-07!4;UBERON:0010082!3.21e-07!4;UBERON:0001871!9.57e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.79e-48;34!UBERON:0002020;1.79e-48;34!UBERON:0000073;2.15e-48;53!UBERON:0002616;2.15e-48;53!UBERON:0002780;8.02e-48;41!UBERON:0001890;8.02e-48;41!UBERON:0001893;1.74e-47;34!UBERON:0002791;3.86e-47;32!UBERON:0001869;3.78e-46;32!UBERON:0002619;4.96e-40;22!UBERON:0000956;8.15e-35;25!UBERON:0000203;8.15e-35;25!UBERON:0001950;1.54e-34;20!UBERON:0001017;8.19e-33;75!UBERON:0000955;6.25e-32;68!UBERON:0001016;5.31e-29;83!UBERON:0000125;1.16e-26;9!UBERON:0002308;1.16e-26;9!UBERON:0009663;9.32e-21;7!UBERON:0002420;9.95e-21;9!UBERON:0007245;9.95e-21;9!UBERON:0010009;9.95e-21;9!UBERON:0010011;9.95e-21;9!UBERON:0000454;9.95e-21;9!UBERON:0002298;5.43e-19;6!UBERON:0000200;8.96e-17;6!UBERON:0004733;3.79e-15;12!UBERON:0002028;3.79e-15;12!UBERON:0004732;7.26e-14;13!UBERON:0007023;1.06e-13;114!UBERON:0000369;1.28e-12;4!UBERON:0002435;1.28e-12;4!UBERON:0000204;1.28e-12;4!UBERON:0011216;2.06e-12;132!UBERON:0002240;1.33e-10;3!UBERON:0005174;1.33e-10;3!UBERON:0001137;1.33e-10;3!UBERON:0001894;1.87e-10;7!UBERON:0000349;2.15e-10;5!UBERON:0000988;2.21e-10;3!UBERON:0001896;2.49e-10;3!UBERON:0005290;2.49e-10;3!UBERON:0001871;4.29e-10;6!UBERON:0005383;7.38e-10;3!UBERON:0005382;7.38e-10;3!UBERON:0000013;1.16e-09;5!UBERON:0002410;1.16e-09;5!UBERON:0001870;3.08e-09;3!UBERON:0001872;3.20e-09;5!UBERON:0002021;7.53e-09;5!UBERON:0002680;4.22e-08;9!UBERON:0001895;4.22e-08;9!UBERON:0002148;1.31e-07;2!UBERON:0006331;1.31e-07;2!UBERON:0009662;1.31e-07;2!UBERON:0002784;1.77e-07;4!UBERON:0001954;1.81e-07;2!UBERON:0003022;1.81e-07;2!UBERON:0002421;1.81e-07;2!UBERON:0002600;1.81e-07;2!UBERON:0001897;2.46e-07;2!UBERON:0010225;2.46e-07;2!UBERON:0001875;3.54e-07;2!UBERON:0006514;3.54e-07;2!UBERON:0001873;5.23e-07;2!UBERON:0010314;7.29e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.78e-90,56;UBERON:0005068,3.78e-90,56;UBERON:0006241,3.78e-90,56;UBERON:0007135,3.78e-90,56;UBERON:0001016,2.93e-84,89;UBERON:0000073,1.92e-81,53;UBERON:0002616,1.92e-81,53;UBERON:0001017,3.57e-80,81;UBERON:0000955,3.27e-70,68;UBERON:0006238,3.27e-70,68;UBERON:0002780,4.80e-67,41;UBERON:0001890,4.80e-67,41;UBERON:0003080,4.80e-67,41;UBERON:0006240,4.80e-67,41;UBERON:0002346,6.73e-61,86;UBERON:0003528,1.73e-58,34;UBERON:0002020,1.73e-58,34;UBERON:0003075,3.31e-58,82;UBERON:0007284,3.31e-58,82;UBERON:0001893,8.10e-58,34;UBERON:0002791,8.25e-53,32;UBERON:0001869,1.18e-52,32;UBERON:0010371,5.44e-46,104;UBERON:0004121,8.94e-44,171;UBERON:0000924,8.94e-44,171;UBERON:0006601,8.94e-44,171;UBERON:0003056,1.97e-42,61;UBERON:0007023,3.28e-41,114;UBERON:0002619,5.30e-40,22;UBERON:0000956,8.65e-35,25;UBERON:0000203,8.65e-35,25;UBERON:0001950,1.57e-34,20;UBERON:0010314,9.50e-34,132;UBERON:0011216,1.34e-31,223;UBERON:0000125,1.15e-26,9;UBERON:0002308,1.15e-26,9;UBERON:0003076,5.88e-23,15;UBERON:0003057,5.88e-23,15;UBERON:0002420,9.24e-21,9;UBERON:0007245,9.24e-21,9;UBERON:0010009,9.24e-21,9;UBERON:0010011,9.24e-21,9;UBERON:0000454,9.24e-21,9;UBERON:0009663,9.37e-21,7;UBERON:0000025,9.55e-21,192;UBERON:0002298,6.16e-19,6;UBERON:0000200,9.25e-17,6;UBERON:0004111,3.20e-15,240;UBERON:0004733,4.35e-15,12;UBERON:0002028,4.35e-15,12;UBERON:0007277,4.35e-15,12;UBERON:0004732,8.23e-14,13;UBERON:0000369,1.26e-12,4;UBERON:0002435,1.26e-12,4;UBERON:0000204,1.26e-12,4;UBERON:0010082,1.26e-12,4;UBERON:0000483,6.30e-11,306;UBERON:0000119,1.04e-10,309;UBERON:0002240,1.33e-10,3;UBERON:0005174,1.33e-10,3;UBERON:0001137,1.33e-10,3;UBERON:0001894,1.99e-10,7;UBERON:0006222,1.99e-10,7;UBERON:0000349,2.16e-10,5;UBERON:0000988,2.32e-10,3;UBERON:0001896,2.70e-10,3;UBERON:0005290,2.70e-10,3;UBERON:0010096,2.70e-10,3;UBERON:0001871,3.93e-10,6;UBERON:0005383,7.07e-10,3;UBERON:0005382,7.07e-10,3;UBERON:0000013,1.15e-09,5;UBERON:0002410,1.15e-09,5;UBERON:0001870,2.28e-09,3;UBERON:0001872,5.27e-09,5;UBERON:0002021,6.69e-09,5;UBERON:0000923,3.76e-08,560;UBERON:0010316,3.76e-08,560;UBERON:0005291,3.76e-08,560;UBERON:0006598,3.76e-08,560;UBERON:0010317,3.76e-08,560;UBERON:0002532,3.76e-08,560;UBERON:0002680,4.53e-08,9;UBERON:0001895,4.53e-08,9;UBERON:0010092,4.53e-08,9;UBERON:0002050,5.46e-08,564;UBERON:0002148,1.29e-07,2;UBERON:0006331,1.29e-07,2;UBERON:0009662,1.29e-07,2;UBERON:0002784,1.79e-07,4;UBERON:0000922,1.81e-07,592;UBERON:0001954,1.93e-07,2;UBERON:0003022,1.93e-07,2;UBERON:0002421,1.93e-07,2;UBERON:0002600,1.93e-07,2;UBERON:0001897,2.18e-07,2;UBERON:0010225,2.18e-07,2;UBERON:0005423,2.53e-07,581;UBERON:0001875,3.44e-07,2;UBERON:0006514,3.44e-07,2;UBERON:0001873,4.79e-07,2;UBERON:0010122,4.79e-07,2;UBERON:0002702,9.17e-07,2;UBERON:0002771,9.71e-07,2 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,1.0007329835313,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,1.27047312111232,0,2.31986643833309,0.502548796003046,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92342957436795,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,2.90799823828566,1.39152147242777,1.99613798001194,0,0,0,0,0,0,4.48166385213904,9.33134762826414,1.21537496453305,3.54296554325536,3.97968247463846,0,1.43753037910592,1.18219047581419,1.31631238292384,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,3.03305098413047,0.802577647298789,3.74823113160543,0,0,0,0.394584402849391,0,1.22429104652196,0.126373159256976,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,1.35588444468319,0,0,2.65905343014691,0,0,0.426905989478705,0,0,0,0.514784993585894,0,0,0,0,0,0,0,5.4037825983881,3.69644523008381,0,0,0,0.837847203816763,0.916641696046735,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,6.36183751847443,6.40156008724405,0.160753148465019,0.275078873194468,0.415440338029185,0,0,3.7057229561395,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,8.53267511986234,7.40502569759064,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,2.65820453990096,2.44052529803926,2.50381861413,4.0138643698305,6.43388498913743,8.50720720296953,0,0,0,0,0,0,5.36207805860053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62691028688288,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79052119825112,31.4848449278311,0.629063767423586,5.78811082417674,0.33946505990805,4.25149840203366,2.72658681369805,1.11728983594649,0,0,0.80057074828547,0,0,4.23912885636633,0,2.07524016774297,1.43581454968528,1.51243017733031,1.65977405914123,3.22951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09366512317023,0.781078098613847,2.06686796501184,2.21955335678674,1.09394961803644,0,0.496211178389294,0.175871244359621,0,2.14280734351315,0.336283722218824,1.21393120847326,0.227662191351298,0,0,0,4.21412344456357,2.17050152757402,0,0,1.56986185701028,5.02769887731206,0,6.39211104356647,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,1.87151570769685,0,0,1.80713731262336,0.109940516745429,0.150962843566674,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,7.26341328325297,7.72320640850424,10.1437374620016,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0,3.29681041248338,0.473314686579554,2.51568513706384,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0.267964130156178,6.63335551567024,4.75791780964718,0.426467963801962,0.714193294391221,0,0,0,0.12729431655633,0.404234377916439,0.435433495793923,0.342233301085281,0.134704106029175,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p1@ENST00000443912 | |||
}} |
Latest revision as of 20:19, 29 July 2015
Short description: | p1@ENST00000443912 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000443912_5end |
Coexpression cluster: | C1428_neuroblastoma_medulla_locus_spinal_hippocampus_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000443912_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|