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FFCP PHASE1:Hg19::chr4:139936055..139936069,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:139936055..139936069,+
|coexpression_cluster_id=C1422
|coexpression_cluster_id=C1422
|description=CAGE_peak_at_chr4:139936055..139936069,+
|description=CAGE_peak_at_chr4:139936055..139936069,+
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0002057!7.71e-34!42;CL:0000860!3.58e-31!45;CL:0002194!3.15e-22!63;CL:0000576!3.15e-22!63;CL:0000040!3.15e-22!63;CL:0000559!3.15e-22!63;CL:0000839!2.13e-21!70;CL:0002009!2.30e-21!65;CL:0000557!5.19e-21!71;CL:0000766!3.17e-19!76;CL:0000763!3.20e-12!112;CL:0000049!3.20e-12!112;CL:0002031!1.89e-10!124;CL:0002087!4.73e-10!119;CL:0000738!1.90e-09!140;CL:1000306!1.76e-07!4;CL:0002547!1.76e-07!4;CL:0002032!4.20e-07!165;CL:0000837!4.20e-07!165
|ontology_enrichment_celltype=CL:0002057!7.71e-34!42;CL:0000860!3.58e-31!45;CL:0002194!3.15e-22!63;CL:0000576!3.15e-22!63;CL:0000040!3.15e-22!63;CL:0000559!3.15e-22!63;CL:0000839!2.13e-21!70;CL:0002009!2.30e-21!65;CL:0000557!5.19e-21!71;CL:0000766!3.17e-19!76;CL:0000763!3.20e-12!112;CL:0000049!3.20e-12!112;CL:0002031!1.89e-10!124;CL:0002087!4.73e-10!119;CL:0000738!1.90e-09!140;CL:1000306!1.76e-07!4;CL:0002547!1.76e-07!4;CL:0002032!4.20e-07!165;CL:0000837!4.20e-07!165
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-57;33!CL:0002057;1.25e-57;33!CL:0000473;3.33e-44;39!CL:0000234;3.33e-44;39!CL:0000576;5.59e-30;48!CL:0000766;6.27e-19;69!CL:0000763;2.13e-10;100!CL:0002087;3.54e-10;104!CL:0000136;6.07e-10;13
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-57;33!CL:0002057;1.25e-57;33!CL:0000473;3.33e-44;39!CL:0000234;3.33e-44;39!CL:0000576;5.59e-30;48!CL:0000766;6.27e-19;69!CL:0000763;2.13e-10;100!CL:0002087;3.54e-10;104!CL:0000136;6.07e-10;13
|ontology_enrichment_celltype_v019_2=CL:0000860,3.90e-56,42;CL:0002057,3.90e-56,42;CL:0000473,2.21e-54,48;CL:0000234,2.21e-54,48;CL:0002194,7.53e-43,59;CL:0000576,7.53e-43,59;CL:0000040,7.53e-43,59;CL:0000559,7.53e-43,59;CL:0000839,2.67e-42,66;CL:0000557,1.26e-41,67;CL:0002009,2.32e-41,61;CL:0000766,1.53e-38,72;CL:0000763,1.17e-24,108;CL:0000049,1.17e-24,108;CL:0002031,7.31e-22,120;CL:0002087,1.55e-20,115;CL:0000738,6.82e-19,136;CL:0002032,2.01e-15,161;CL:0000837,2.01e-15,161;CL:0000037,1.24e-14,168;CL:0000988,1.04e-13,177;CL:0000136,1.24e-08,15;CL:0000134,1.49e-08,354;CL:0002320,2.63e-08,361;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441;CL:0000219,1.95e-07,386
|ontology_enrichment_development_v019=CL:0002057;3.78e-37;42!CL:0000049;5.63e-07;108
|ontology_enrichment_development_v019=CL:0002057;3.78e-37;42!CL:0000049;5.63e-07;108
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0002371!5.87e-18!80;UBERON:0001474!2.80e-16!86;UBERON:0002193!3.74e-16!112;UBERON:0004765!1.38e-15!101;UBERON:0001434!1.38e-15!101;UBERON:0002405!2.88e-14!115;UBERON:0002390!4.76e-14!102;UBERON:0003061!4.76e-14!102;UBERON:0002204!1.70e-08!167;UBERON:0003081!3.00e-08!216;UBERON:0000415!1.76e-07!4;UBERON:0007240!1.76e-07!4;UBERON:0005742!1.76e-07!4;UBERON:0005734!1.76e-07!4;UBERON:0004664!1.76e-07!4;UBERON:0004663!1.76e-07!4
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.33e-36,76;UBERON:0002405,1.02e-35,93;UBERON:0001474,1.76e-33,82;UBERON:0002193,2.70e-30,108;UBERON:0004765,3.13e-30,90;UBERON:0002390,1.66e-27,98;UBERON:0003061,1.66e-27,98;UBERON:0001434,6.84e-27,100;UBERON:0002204,9.63e-15,167;UBERON:0003081,1.69e-11,203;UBERON:0002384,5.71e-08,371
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|short_description=p@chr4:139936055..139936069,+
|short_description=p@chr4:139936055..139936069,+
}}
}}

Latest revision as of 01:42, 30 July 2015

Short description:p@chr4:139936055..139936069, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr4:139936055..139936069, +
Coexpression cluster:C1422_mature_CD14_Mast_Eosinophils_immature_heart_Neutrophils
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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