FFCP PHASE1:Hg19::chr4:145567043..145567058,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENST00000503066_5end | |||
|cluster_id=chr4:145567043..145567058,- | |||
|coexpression_cluster_id=C2581 | |||
|description=CAGE_peak_3_at_ENST00000503066_5end | |||
|id=chr4:145567043..145567058,- | |||
|ontology_enrichment_celltype=CL:0002139!1.11e-31!24;CL:0000115!7.42e-31!35;CL:0000222!5.37e-27!119;CL:0000071!3.06e-26!18;CL:0002546!3.06e-26!18;CL:0002078!2.23e-24!44;CL:0000213!6.40e-21!57;CL:0000215!6.40e-21!57;CL:1000413!1.26e-15!9;CL:0000359!1.75e-13!32;CL:0000220!1.44e-11!246;CL:0002321!2.48e-11!248;CL:0000192!2.63e-11!42;CL:0000514!2.63e-11!42;CL:0002543!4.29e-11!6;CL:0002544!7.08e-11!6;CL:0000183!1.10e-10!59;CL:0002494!9.51e-10!16;CL:0000680!2.47e-09!57;CL:0000056!2.47e-09!57;CL:0000355!2.47e-09!57;CL:0000187!2.52e-08!54;CL:1000612!7.96e-08!7;CL:1000746!7.96e-08!7;CL:0005020!3.78e-07!6;CL:0002138!3.78e-07!6;CL:0005022!3.78e-07!6;CL:0002594!4.61e-07!4;CL:0000393!6.32e-07!60;CL:0000211!6.32e-07!60;CL:0002548!7.44e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.92e-66;24!CL:0000071;4.05e-63;18!CL:0000115;2.86e-59;36!CL:0002078;1.11e-33;45!CL:1000413;9.13e-33;9!CL:0002543;2.28e-27;6!CL:0000213;2.54e-26;58!CL:0000215;2.54e-26;58!CL:0002544;6.98e-20;6!CL:0002618;4.01e-15;3!CL:0000076;8.18e-11;63!CL:0002262;2.00e-10;2!CL:1000398;2.00e-10;2!CL:0002188;1.31e-08;5!CL:0002138;1.73e-07;6!CL:0002548;2.05e-07;6!CL:0002144;4.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.16e-69,36;CL:0002139,1.06e-66,24;CL:0000071,4.51e-64,18;CL:0002546,4.51e-64,18;CL:0002078,2.26e-54,45;CL:0000213,1.30e-44,58;CL:0000215,1.30e-44,58;CL:1000413,3.63e-33,9;CL:0000222,4.73e-28,121;CL:0002543,4.88e-28,6;CL:0002544,3.92e-20,6;CL:0000076,8.59e-18,63;CL:0002618,2.97e-15,3;CL:0002321,7.24e-11,250;CL:0002262,2.01e-10,2;CL:1000398,2.01e-10,2;CL:0002188,1.46e-08,5;CL:0005020,1.99e-07,6;CL:0002138,1.99e-07,6;CL:0005022,1.99e-07,6;CL:0002548,3.23e-07,6;CL:0002144,4.39e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.05e-63;18!CL:0000222;5.72e-11;121!CL:0005022;1.73e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.61e-40!79;UBERON:0007798!3.61e-40!79;UBERON:0000055!1.25e-38!69;UBERON:0004535!2.14e-36!110;UBERON:0001981!2.05e-35!60;UBERON:0007500!2.05e-35!60;UBERON:0004537!2.05e-35!60;UBERON:0006965!2.05e-35!60;UBERON:0001009!6.49e-35!113;UBERON:0004872!1.32e-34!84;UBERON:0003914!4.76e-31!118;UBERON:0001637!1.43e-26!42;UBERON:0003509!1.43e-26!42;UBERON:0004572!1.43e-26!42;UBERON:0001986!3.06e-26!18;UBERON:0004638!3.06e-26!18;UBERON:0004852!3.06e-26!18;UBERON:0000487!1.03e-22!22;UBERON:0000025!1.15e-21!194;UBERON:0006914!1.95e-21!25;UBERON:0000477!5.02e-19!286;UBERON:0004111!4.01e-18!241;UBERON:0004573!2.66e-17!33;UBERON:0004571!2.66e-17!33;UBERON:0000119!1.56e-16!312;UBERON:0000490!4.15e-16!138;UBERON:0003915!1.26e-15!9;UBERON:0004700!1.26e-15!9;UBERON:0001917!1.26e-15!9;UBERON:0000483!6.07e-15!309;UBERON:0003081!1.82e-10!216;UBERON:0002385!1.90e-09!63;UBERON:0001015!1.90e-09!63;UBERON:0000383!1.90e-09!63;UBERON:0001638!5.11e-09!9;UBERON:0003920!5.11e-09!9;UBERON:0004582!5.11e-09!9;UBERON:0001134!2.66e-08!61;UBERON:0002036!2.66e-08!61;UBERON:0003082!2.66e-08!61;UBERON:0000948!4.89e-08!24;UBERON:0005498!4.89e-08!24;UBERON:0004140!4.89e-08!24;UBERON:0009881!4.89e-08!24;UBERON:0004141!4.89e-08!24;UBERON:0003084!4.89e-08!24;UBERON:0007005!4.89e-08!24;UBERON:0004139!4.89e-08!24;UBERON:0004291!4.89e-08!24;UBERON:0000074!7.96e-08!7;UBERON:0001229!7.96e-08!7;UBERON:0001230!7.96e-08!7;UBERON:0005749!7.96e-08!7;UBERON:0004199!7.96e-08!7;UBERON:0004209!7.96e-08!7;UBERON:0004198!7.96e-08!7;UBERON:0000947!8.68e-08!21;UBERON:0010191!8.68e-08!21;UBERON:0004290!3.54e-07!70;UBERON:0001310!4.61e-07!4;UBERON:0007100!8.62e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.05e-63;18!UBERON:0001986;4.05e-63;18!UBERON:0004852;4.05e-63;18!UBERON:0000487;5.80e-51;22!UBERON:0006914;2.13e-44;25!UBERON:0003915;9.13e-33;9!UBERON:0004700;9.13e-33;9!UBERON:0001917;9.13e-33;9!UBERON:0000490;1.50e-30;33!UBERON:0007500;4.79e-30;56!UBERON:0001981;4.79e-30;56!UBERON:0004537;4.79e-30;56!UBERON:0000055;7.76e-25;65!UBERON:0003914;8.61e-23;74!UBERON:0001637;1.18e-22;42!UBERON:0003509;1.18e-22;42!UBERON:0004572;1.18e-22;42!UBERON:0001638;4.63e-18;9!UBERON:0003920;4.63e-18;9!UBERON:0004582;4.63e-18;9!UBERON:0002049;1.18e-17;75!UBERON:0007798;1.18e-17;75!UBERON:0004535;9.82e-14;109!UBERON:0000947;4.07e-13;21!UBERON:0010191;4.07e-13;21!UBERON:0000025;7.20e-13;93!UBERON:0010260;7.81e-13;9!UBERON:0004573;7.98e-11;33!UBERON:0004571;7.98e-11;33!UBERON:0001281;2.00e-10;2!UBERON:0003497;2.00e-10;2!UBERON:0003909;2.00e-10;2!UBERON:0003835;2.00e-10;2!UBERON:0004111;2.82e-10;130!UBERON:0001009;2.92e-10;112!UBERON:0002066;2.96e-09;5!UBERON:0000119;1.65e-08;139!UBERON:0000353;2.11e-07;15!UBERON:0001280;3.22e-07;3!UBERON:0004647;3.22e-07;3!UBERON:0010523;4.06e-07;3!UBERON:0001915;4.06e-07;3!UBERON:0001982;4.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.51e-64,18;UBERON:0001986,4.51e-64,18;UBERON:0004852,4.51e-64,18;UBERON:0000487,9.75e-52,22;UBERON:0000055,2.63e-51,68;UBERON:0007500,1.03e-47,59;UBERON:0001981,1.03e-47,59;UBERON:0004537,1.03e-47,59;UBERON:0006965,1.03e-47,59;UBERON:0006914,4.48e-45,25;UBERON:0002049,7.09e-44,78;UBERON:0007798,7.09e-44,78;UBERON:0004872,1.12e-40,83;UBERON:0004535,1.06e-36,109;UBERON:0001009,1.58e-35,112;UBERON:0003914,1.40e-33,117;UBERON:0003915,3.63e-33,9;UBERON:0004700,3.63e-33,9;UBERON:0001917,3.63e-33,9;UBERON:0001637,7.24e-25,42;UBERON:0003509,7.24e-25,42;UBERON:0004572,7.24e-25,42;UBERON:0000025,2.51e-20,192;UBERON:0004111,1.51e-18,240;UBERON:0001638,1.69e-18,9;UBERON:0003920,1.69e-18,9;UBERON:0004582,1.69e-18,9;UBERON:0003081,1.27e-17,203;UBERON:0000947,3.49e-13,21;UBERON:0010191,3.49e-13,21;UBERON:0010260,5.73e-13,9;UBERON:0000490,1.03e-12,148;UBERON:0004573,1.91e-12,33;UBERON:0004571,1.91e-12,33;UBERON:0001281,2.01e-10,2;UBERON:0003497,2.01e-10,2;UBERON:0003909,2.01e-10,2;UBERON:0003835,2.01e-10,2;UBERON:0000483,4.91e-10,306;UBERON:0000119,7.23e-10,309;UBERON:0002066,2.48e-09,5;UBERON:0000926,8.10e-09,315;UBERON:0004120,8.10e-09,315;UBERON:0006603,8.10e-09,315;UBERON:0000353,2.24e-07,15;UBERON:0001280,3.23e-07,3;UBERON:0004647,3.23e-07,3;UBERON:0005171,3.23e-07,3;UBERON:0010523,4.39e-07,3;UBERON:0001915,4.39e-07,3;UBERON:0001982,4.39e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,1.02000345622126,0,0,0,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,2.98143611050058,2.58070378531837,3.47140501607594,3.39184765154406,2.09749718104953,3.30141650328081,1.67195973229448,0.516833518338658,0,0.66944122552934,2.01414658554573,0,1.46437234528902,0.367663080345869,1.62028389576352,1.51809538082936,3.81699933464489,4.95490514126618,1.53316637465883,1.89853131913626,1.83201743930407,0,0,0,0,1.2663051166458,0,0,1.41867352879343,0,2.1349799145941,0.24666754841716,0.622422070799533,1.0776853765575,1.14423332179421,0.302714855289863,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,1.24775401476023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469634776943287,1.44366447761074,3.24089858803628,1.33177906564219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.22001485746285,0,0,0,0.26593811658487,0,0.257207374262142,4.25547396069835,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.355123450626254,0,1.55776328755086,0.116210378459959,0,0,0,0,0,0,0,0,0.784349769176855,0,0,1.13733384070897,0.170093705276516,1.51141141271498,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,2.12922412126809,0,0.55597265731176,0.858749320451947,0.744316738719335,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0,0,0.606547444719948,3.17020642346017,0.842516912477962,0,0.974853958525138,0,0,0,0,0.551365343546124,0,1.75380354101505,0.578775534266688,0,0.608731130888112,1.239293992399,1.97186921772569,0,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02989091390451,0,1.23337732182076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,1.54400723580486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0,1.3948971044175,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0.315543124386369,0.135982980381829,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0,0.202117188958219,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ENST00000503066 | |||
}} |
Latest revision as of 01:59, 30 July 2015
Short description: | p3@ENST00000503066 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000503066_5end |
Coexpression cluster: | C2581_Renal_Endothelial_extraskeletal_Hepatic_Lymphatic_Mesenchymal_Smooth |
Association with transcript: | 5bp_to_ENST00000503066_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.16e-69 | 36 |
endothelial cell of vascular tree | 1.06e-66 | 24 |
blood vessel endothelial cell | 4.51e-64 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.51e-64 | 18 |
meso-epithelial cell | 2.26e-54 | 45 |
lining cell | 1.30e-44 | 58 |
barrier cell | 1.30e-44 | 58 |
endothelial cell of artery | 3.63e-33 | 9 |
mesodermal cell | 4.73e-28 | 121 |
vein endothelial cell | 4.88e-28 | 6 |
aortic endothelial cell | 3.92e-20 | 6 |
squamous epithelial cell | 8.59e-18 | 63 |
endothelial cell of umbilical vein | 2.97e-15 | 3 |
embryonic cell | 7.24e-11 | 250 |
endothelial cell of sinusoid | 2.01e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.01e-10 | 2 |
glomerular endothelial cell | 1.46e-08 | 5 |
lymphangioblast | 1.99e-07 | 6 |
endothelial cell of lymphatic vessel | 1.99e-07 | 6 |
vascular lymphangioblast | 1.99e-07 | 6 |
cardiac fibroblast | 3.23e-07 | 6 |
capillary endothelial cell | 4.39e-07 | 3 |