FFCP PHASE1:Hg19::chr5:95296930..95296942,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:95296930..95296942,- | |||
|coexpression_cluster_id=C2422 | |||
|description=CAGE_peak_at_chr5:95296930..95296942,- | |description=CAGE_peak_at_chr5:95296930..95296942,- | ||
|id=chr5:95296930..95296942,- | |id=chr5:95296930..95296942,- | ||
|ontology_enrichment_celltype=CL:0000738!5.90e-36!140;CL:0002057!2.94e-34!42;CL:0000860!3.29e-34!45;CL:0002031!6.02e-34!124;CL:0000557!1.01e-33!71;CL:0000766!4.93e-31!76;CL:0000839!1.44e-29!70;CL:0000037!2.18e-28!172;CL:0000566!2.18e-28!172;CL:0002087!4.11e-28!119;CL:0000988!1.57e-27!182;CL:0002009!1.99e-27!65;CL:0002032!5.52e-27!165;CL:0000837!5.52e-27!165;CL:0002194!4.96e-24!63;CL:0000576!4.96e-24!63;CL:0000040!4.96e-24!63;CL:0000559!4.96e-24!63;CL:0000763!8.40e-23!112;CL:0000049!8.40e-23!112;CL:0000134!2.18e-13!358;CL:0002320!7.21e-13!365;CL:0002393!8.60e-12!9;CL:0002397!8.60e-12!9;CL:0000219!4.85e-11!390;CL:0002274!1.85e-10!5;CL:0000457!1.85e-10!5;CL:0002191!1.85e-10!5;CL:0000097!1.85e-10!5;CL:0000831!1.85e-10!5;CL:0002028!1.85e-10!5;CL:0000623!9.26e-10!3;CL:0000825!9.26e-10!3;CL:0000048!7.16e-09!430;CL:0000723!1.45e-08!436;CL:0000034!3.59e-08!444;CL:0001014!4.89e-07!2;CL:0001016!4.89e-07!2 | |ontology_enrichment_celltype=CL:0000738!5.90e-36!140;CL:0002057!2.94e-34!42;CL:0000860!3.29e-34!45;CL:0002031!6.02e-34!124;CL:0000557!1.01e-33!71;CL:0000766!4.93e-31!76;CL:0000839!1.44e-29!70;CL:0000037!2.18e-28!172;CL:0000566!2.18e-28!172;CL:0002087!4.11e-28!119;CL:0000988!1.57e-27!182;CL:0002009!1.99e-27!65;CL:0002032!5.52e-27!165;CL:0000837!5.52e-27!165;CL:0002194!4.96e-24!63;CL:0000576!4.96e-24!63;CL:0000040!4.96e-24!63;CL:0000559!4.96e-24!63;CL:0000763!8.40e-23!112;CL:0000049!8.40e-23!112;CL:0000134!2.18e-13!358;CL:0002320!7.21e-13!365;CL:0002393!8.60e-12!9;CL:0002397!8.60e-12!9;CL:0000219!4.85e-11!390;CL:0002274!1.85e-10!5;CL:0000457!1.85e-10!5;CL:0002191!1.85e-10!5;CL:0000097!1.85e-10!5;CL:0000831!1.85e-10!5;CL:0002028!1.85e-10!5;CL:0000623!9.26e-10!3;CL:0000825!9.26e-10!3;CL:0000048!7.16e-09!430;CL:0000723!1.45e-08!436;CL:0000034!3.59e-08!444;CL:0001014!4.89e-07!2;CL:0001016!4.89e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.39e-36;5!CL:0002393;2.06e-30;6!CL:0002397;2.06e-30;6!CL:0000163;1.09e-20;9!CL:0000766;3.41e-14;69!CL:0000771;3.70e-11;2!CL:0000576;4.94e-09;48!CL:0000763;4.20e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.57e-36,5;CL:0002028,1.57e-36,5;CL:0000766,1.14e-26,72;CL:0000839,1.52e-23,66;CL:0000557,3.40e-23,67;CL:0000163,1.16e-20,9;CL:0002393,1.62e-20,9;CL:0002397,1.62e-20,9;CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0000860,7.15e-17,42;CL:0002057,7.15e-17,42;CL:0000473,9.21e-15,48;CL:0000234,9.21e-15,48;CL:0000738,4.83e-14,136;CL:0002031,7.07e-13,120;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0002194,8.44e-12,59;CL:0000576,8.44e-12,59;CL:0000040,8.44e-12,59;CL:0000559,8.44e-12,59;CL:0002009,2.04e-11,61;CL:0000037,2.70e-11,168;CL:0000771,3.35e-11,2;CL:0000988,1.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.77e-30!86;UBERON:0002371!5.77e-29!80;UBERON:0002390!6.21e-26!102;UBERON:0003061!6.21e-26!102;UBERON:0004765!2.52e-24!101;UBERON:0001434!2.52e-24!101;UBERON:0002193!8.74e-23!112;UBERON:0002405!8.05e-19!115;UBERON:0002384!3.69e-12!375;UBERON:0002204!4.27e-12!167;UBERON:0003081!2.06e-10!216 | |ontology_enrichment_uberon=UBERON:0001474!3.77e-30!86;UBERON:0002371!5.77e-29!80;UBERON:0002390!6.21e-26!102;UBERON:0003061!6.21e-26!102;UBERON:0004765!2.52e-24!101;UBERON:0001434!2.52e-24!101;UBERON:0002193!8.74e-23!112;UBERON:0002405!8.05e-19!115;UBERON:0002384!3.69e-12!375;UBERON:0002204!4.27e-12!167;UBERON:0003081!2.06e-10!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.89e-20,76;UBERON:0001474,6.01e-19,82;UBERON:0004765,2.98e-17,90;UBERON:0002405,1.09e-16,93;UBERON:0002390,7.91e-16,98;UBERON:0003061,7.91e-16,98;UBERON:0001434,1.66e-15,100;UBERON:0002193,2.43e-14,108;UBERON:0002204,3.86e-09,167;UBERON:0003081,1.99e-07,203 | |||
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|short_description=p@chr5:95296930..95296942,- | |short_description=p@chr5:95296930..95296942,- | ||
}} | }} |
Latest revision as of 17:28, 30 July 2015
Short description: | p@chr5:95296930..95296942, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:95296930..95296942, - |
Coexpression cluster: | C2422_CD14_Mast_Eosinophils_Neutrophils_CD19_Peripheral_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.57e-36 | 5 |
basophil mast progenitor cell | 1.57e-36 | 5 |
myeloid leukocyte | 1.14e-26 | 72 |
myeloid lineage restricted progenitor cell | 1.52e-23 | 66 |
granulocyte monocyte progenitor cell | 3.40e-23 | 67 |
endocrine cell | 1.16e-20 | 9 |
intermediate monocyte | 1.62e-20 | 9 |
CD14-positive, CD16-positive monocyte | 1.62e-20 | 9 |
myeloid cell | 9.38e-18 | 108 |
common myeloid progenitor | 9.38e-18 | 108 |
classical monocyte | 7.15e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.15e-17 | 42 |
defensive cell | 9.21e-15 | 48 |
phagocyte | 9.21e-15 | 48 |
leukocyte | 4.83e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 7.07e-13 | 120 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
monopoietic cell | 8.44e-12 | 59 |
monocyte | 8.44e-12 | 59 |
monoblast | 8.44e-12 | 59 |
promonocyte | 8.44e-12 | 59 |
macrophage dendritic cell progenitor | 2.04e-11 | 61 |
hematopoietic stem cell | 2.70e-11 | 168 |
eosinophil | 3.35e-11 | 2 |
hematopoietic cell | 1.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.89e-20 | 76 |
bone element | 6.01e-19 | 82 |
skeletal element | 2.98e-17 | 90 |
immune system | 1.09e-16 | 93 |
hematopoietic system | 7.91e-16 | 98 |
blood island | 7.91e-16 | 98 |
skeletal system | 1.66e-15 | 100 |
hemolymphoid system | 2.43e-14 | 108 |
musculoskeletal system | 3.86e-09 | 167 |
lateral plate mesoderm | 1.99e-07 | 203 |