FFCP PHASE1:Hg19::chr6:110796700..110796758,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:110796700..110796758,+ | |||
|coexpression_cluster_id=C3146 | |||
|description=CAGE_peak_at_chr6:110796700..110796758,+ | |description=CAGE_peak_at_chr6:110796700..110796758,+ | ||
|id=chr6:110796700..110796758,+ | |id=chr6:110796700..110796758,+ | ||
|ontology_enrichment_celltype=CL:0000763!6.01e-62!112;CL:0000049!6.01e-62!112;CL:0002194!7.93e-51!63;CL:0000576!7.93e-51!63;CL:0000040!7.93e-51!63;CL:0000559!7.93e-51!63;CL:0000037!2.78e-49!172;CL:0000566!2.78e-49!172;CL:0002009!8.53e-49!65;CL:0000839!1.66e-48!70;CL:0000557!1.24e-45!71;CL:0000766!1.51e-45!76;CL:0000988!3.13e-45!182;CL:0002032!2.27e-44!165;CL:0000837!2.27e-44!165;CL:0002057!1.59e-43!42;CL:0000860!8.18e-40!45;CL:0002087!3.85e-32!119;CL:0000738!1.06e-29!140;CL:0002031!8.61e-29!124;CL:0000134!3.33e-12!358;CL:0002320!1.47e-11!365;CL:0000219!2.53e-09!390;CL:0002393!9.70e-08!9;CL:0002397!9.70e-08!9;CL:0000034!1.13e-07!444;CL:0000048!4.08e-07!430;CL:0000723!9.41e-07!436 | |ontology_enrichment_celltype=CL:0000763!6.01e-62!112;CL:0000049!6.01e-62!112;CL:0002194!7.93e-51!63;CL:0000576!7.93e-51!63;CL:0000040!7.93e-51!63;CL:0000559!7.93e-51!63;CL:0000037!2.78e-49!172;CL:0000566!2.78e-49!172;CL:0002009!8.53e-49!65;CL:0000839!1.66e-48!70;CL:0000557!1.24e-45!71;CL:0000766!1.51e-45!76;CL:0000988!3.13e-45!182;CL:0002032!2.27e-44!165;CL:0000837!2.27e-44!165;CL:0002057!1.59e-43!42;CL:0000860!8.18e-40!45;CL:0002087!3.85e-32!119;CL:0000738!1.06e-29!140;CL:0002031!8.61e-29!124;CL:0000134!3.33e-12!358;CL:0002320!1.47e-11!365;CL:0000219!2.53e-09!390;CL:0002393!9.70e-08!9;CL:0002397!9.70e-08!9;CL:0000034!1.13e-07!444;CL:0000048!4.08e-07!430;CL:0000723!9.41e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.73e-36;33!CL:0002057;4.73e-36;33!CL:0000473;6.25e-33;39!CL:0000234;6.25e-33;39!CL:0000576;1.24e-25;48!CL:0000763;5.92e-22;100!CL:0000766;1.03e-18;69!CL:0000988;1.58e-07;177!CL:0000738;9.86e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.19e-57,108;CL:0000049,5.19e-57,108;CL:0002194,3.10e-42,59;CL:0000576,3.10e-42,59;CL:0000040,3.10e-42,59;CL:0000559,3.10e-42,59;CL:0000037,6.56e-42,168;CL:0002009,1.32e-40,61;CL:0000473,4.33e-40,48;CL:0000234,4.33e-40,48;CL:0000839,1.52e-39,66;CL:0000988,3.61e-39,177;CL:0000557,5.63e-39,67;CL:0002032,2.76e-38,161;CL:0000837,2.76e-38,161;CL:0000860,1.74e-36,42;CL:0002057,1.74e-36,42;CL:0000766,1.19e-35,72;CL:0002087,1.42e-22,115;CL:0002031,3.05e-21,120;CL:0000738,1.50e-20,136;CL:0000134,1.62e-13,354;CL:0002320,5.10e-13,361;CL:0000219,2.85e-11,386;CL:0000034,1.36e-10,441;CL:0000048,3.81e-09,427;CL:0000723,7.46e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.17e-29;42!CL:0000049;3.06e-18;108 | |||
|ontology_enrichment_disease=DOID:8692!1.19e-19!31;DOID:1240!1.96e-19!39;DOID:2531!1.37e-14!51;DOID:0060083!1.37e-14!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.83e-27;31!DOID:1240;3.08e-22;39!DOID:2531;2.19e-13;51!DOID:0060083;2.19e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.11e-28,31;DOID:1240,4.47e-27,39;DOID:2531,8.92e-22,51;DOID:0060083,8.92e-22,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.36e-46!102;UBERON:0003061!1.36e-46!102;UBERON:0002371!6.52e-41!80;UBERON:0002193!9.50e-41!112;UBERON:0001474!5.88e-37!86;UBERON:0002405!1.66e-31!115;UBERON:0004765!3.76e-29!101;UBERON:0001434!3.76e-29!101;UBERON:0003081!2.20e-15!216;UBERON:0002204!5.29e-14!167;UBERON:0002384!3.55e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.92e-38,98;UBERON:0003061,2.92e-38,98;UBERON:0002371,4.69e-36,76;UBERON:0002193,7.70e-34,108;UBERON:0001474,8.02e-33,82;UBERON:0002405,5.79e-30,93;UBERON:0004765,3.53e-29,90;UBERON:0001434,1.93e-25,100;UBERON:0003081,1.37e-13,203;UBERON:0002384,2.42e-12,371;UBERON:0002204,5.25e-12,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,1.23852898652861,0,0,0,0,0,31.4152470088287,0.553995408531877,1.20326668482085,1.08505435357926,0.447830948479849,0.32389366601898,0,2.32637182047304,1.13362783106643,0,4.88100977501938,2.87817521615278,0,5.46615545412086,3.07392847834921,0.47296445977717,3.10271112662957,2.5819387343353,0,3.20011977222428,2.45615535052061,0.224723484445085,5.50951006267625,0.641858054152187,0,1.64925650093358,1.39624560335142,0.852449501065388,4.93355705668593,1.13477044938228,0.622822248995575,5.52747063564835,1.0429658368404,0.65156653411535,3.63239701580021,1.10483290796269,0.632924774881769,0.422510572623884,0.425208599930087,0.838634582033504,1.79725809834392,3.90459921387916,2.08943262706204,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,14.5388461436928,3.92355994087075,11.5888997301034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,1.19662164466979,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.50999940573032,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.522870902049801,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0,1.64544909234478,0,1.08006287447623,0,0,0,0,0,4.1838071763169,0,0,36.7226043436383,7.27720406502993,0.635020748171649,44.1485838773395,42.4003738951323,14.8352541371575,6.58055562246698,27.5697924799074,0,1.1241165257259,7.26478945887771,2.55507742614196,6.18309620560377,21.8140942659005,17.223060307716,14.8495736123599,26.1820047838734,0,0,0,0.66614393599564,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9050329579405,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08773192782946,14.9131243575274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0.410462603746695,0,0,0,2.65013777824443,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,5.12120302531876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0.852935927603924,0.23806443146374,1.87307838524418,0.558672428662721,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,1.23852898652861,0,0,0,0,0,31.4152470088287,0.553995408531877,1.20326668482085,1.08505435357926,0.447830948479849,0.32389366601898,0,2.32637182047304,1.13362783106643,0,4.88100977501938,2.87817521615278,0,5.46615545412086,3.07392847834921,0.47296445977717,3.10271112662957,2.5819387343353,0,3.20011977222428,2.45615535052061,0.224723484445085,5.50951006267625,0.641858054152187,0,1.64925650093358,1.39624560335142,0.852449501065388,4.93355705668593,1.13477044938228,0.622822248995575,5.52747063564835,1.0429658368404,0.65156653411535,3.63239701580021,1.10483290796269,0.632924774881769,0.422510572623884,0.425208599930087,0.838634582033504,1.79725809834392,3.90459921387916,2.08943262706204,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,14.5388461436928,3.92355994087075,11.5888997301034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,1.19662164466979,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.50999940573032,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.522870902049801,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0,1.64544909234478,0,1.08006287447623,0,0,0,0,0,4.1838071763169,0,0,36.7226043436383,7.27720406502993,0.635020748171649,44.1485838773395,42.4003738951323,14.8352541371575,6.58055562246698,27.5697924799074,0,1.1241165257259,7.26478945887771,2.55507742614196,6.18309620560377,21.8140942659005,17.223060307716,14.8495736123599,26.1820047838734,0,0,0,0.66614393599564,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9050329579405,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08773192782946,14.9131243575274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0.410462603746695,0,0,0,2.65013777824443,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,5.12120302531876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0.852935927603924,0.23806443146374,1.87307838524418,0.558672428662721,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr6:110796700..110796758,+ | |short_description=p@chr6:110796700..110796758,+ | ||
}} | }} |
Latest revision as of 18:15, 30 July 2015
Short description: | p@chr6:110796700..110796758, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:110796700..110796758, + |
Coexpression cluster: | C3146_acute_CD133_CD34_chronic_biphenotypic_myelodysplastic_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.19e-57 | 108 |
common myeloid progenitor | 5.19e-57 | 108 |
monopoietic cell | 3.10e-42 | 59 |
monocyte | 3.10e-42 | 59 |
monoblast | 3.10e-42 | 59 |
promonocyte | 3.10e-42 | 59 |
hematopoietic stem cell | 6.56e-42 | 168 |
macrophage dendritic cell progenitor | 1.32e-40 | 61 |
defensive cell | 4.33e-40 | 48 |
phagocyte | 4.33e-40 | 48 |
myeloid lineage restricted progenitor cell | 1.52e-39 | 66 |
hematopoietic cell | 3.61e-39 | 177 |
granulocyte monocyte progenitor cell | 5.63e-39 | 67 |
hematopoietic oligopotent progenitor cell | 2.76e-38 | 161 |
hematopoietic multipotent progenitor cell | 2.76e-38 | 161 |
classical monocyte | 1.74e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.74e-36 | 42 |
myeloid leukocyte | 1.19e-35 | 72 |
nongranular leukocyte | 1.42e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 3.05e-21 | 120 |
leukocyte | 1.50e-20 | 136 |
mesenchymal cell | 1.62e-13 | 354 |
connective tissue cell | 5.10e-13 | 361 |
motile cell | 2.85e-11 | 386 |
stem cell | 1.36e-10 | 441 |
multi fate stem cell | 3.81e-09 | 427 |
somatic stem cell | 7.46e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.92e-38 | 98 |
blood island | 2.92e-38 | 98 |
bone marrow | 4.69e-36 | 76 |
hemolymphoid system | 7.70e-34 | 108 |
bone element | 8.02e-33 | 82 |
immune system | 5.79e-30 | 93 |
skeletal element | 3.53e-29 | 90 |
skeletal system | 1.93e-25 | 100 |
lateral plate mesoderm | 1.37e-13 | 203 |
connective tissue | 2.42e-12 | 371 |
musculoskeletal system | 5.25e-12 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.11e-28 | 31 |
leukemia | 4.47e-27 | 39 |
hematologic cancer | 8.92e-22 | 51 |
immune system cancer | 8.92e-22 | 51 |