FFCP PHASE1:Hg19::chr6:138413333..138413389,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:138413333..138413389,- | |||
|coexpression_cluster_id=C1043 | |||
|description=CAGE_peak_at_chr6:138413333..138413389,- | |description=CAGE_peak_at_chr6:138413333..138413389,- | ||
|id=chr6:138413333..138413389,- | |id=chr6:138413333..138413389,- | ||
|ontology_enrichment_celltype=CL:0000066!9.40e-25!254;CL:0002076!2.16e-13!43;CL:0000223!1.19e-12!59;CL:0002251!3.53e-09!21;CL:0002321!1.87e-07!248;CL:0000220!3.08e-07!246 | |ontology_enrichment_celltype=CL:0000066!9.40e-25!254;CL:0002076!2.16e-13!43;CL:0000223!1.19e-12!59;CL:0002251!3.53e-09!21;CL:0002321!1.87e-07!248;CL:0000220!3.08e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002159;4.07e-12;14!CL:0000244;2.01e-11;4!CL:0000731;2.01e-11;4!CL:0002076;5.31e-11;42!CL:0000622;2.55e-10;5!CL:0002251;3.31e-10;20!CL:0002623;4.95e-10;3!CL:0002621;2.94e-09;3!CL:0002166;6.45e-09;3!CL:0000154;1.39e-08;6!CL:0000575;3.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.69e-14,42;CL:0002159,2.84e-12,14;CL:0000223,1.48e-11,58;CL:0000244,1.63e-11,4;CL:0000731,1.63e-11,4;CL:0000622,2.35e-10,5;CL:0002251,3.11e-10,20;CL:0002623,4.43e-10,3;CL:0002621,3.46e-09,3;CL:0000066,3.84e-09,253;CL:0002166,5.89e-09,3;CL:0000154,1.29e-08,6;CL:0000575,2.95e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.42e-11!106;DOID:0050687!2.77e-08!143 | |ontology_enrichment_disease=DOID:305!1.42e-11!106;DOID:0050687!2.77e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.06e-18!169;UBERON:0000925!1.06e-18!169;UBERON:0006595!1.06e-18!169;UBERON:0001007!7.29e-15!155;UBERON:0001555!7.29e-15!155;UBERON:0007026!7.29e-15!155;UBERON:0001004!8.76e-14!72;UBERON:0000161!1.08e-12!35;UBERON:0000077!2.41e-12!130;UBERON:0004921!1.01e-11!129;UBERON:0004185!1.01e-11!129;UBERON:0000165!2.79e-09!28;UBERON:0000930!2.79e-09!28;UBERON:0000166!5.61e-09!21;UBERON:0000065!1.06e-08!53;UBERON:0008947!1.36e-07!38;UBERON:0003258!1.36e-07!38;UBERON:0001041!2.29e-07!98;UBERON:0000464!2.42e-07!104 | |ontology_enrichment_uberon=UBERON:0004119!1.06e-18!169;UBERON:0000925!1.06e-18!169;UBERON:0006595!1.06e-18!169;UBERON:0001007!7.29e-15!155;UBERON:0001555!7.29e-15!155;UBERON:0007026!7.29e-15!155;UBERON:0001004!8.76e-14!72;UBERON:0000161!1.08e-12!35;UBERON:0000077!2.41e-12!130;UBERON:0004921!1.01e-11!129;UBERON:0004185!1.01e-11!129;UBERON:0000165!2.79e-09!28;UBERON:0000930!2.79e-09!28;UBERON:0000166!5.61e-09!21;UBERON:0000065!1.06e-08!53;UBERON:0008947!1.36e-07!38;UBERON:0003258!1.36e-07!38;UBERON:0001041!2.29e-07!98;UBERON:0000464!2.42e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;4.24e-12;6!UBERON:0003293;4.24e-12;6!UBERON:0003294;4.24e-12;6!UBERON:0010047;4.24e-12;6!UBERON:0003408;4.24e-12;6!UBERON:0000167;4.24e-12;6!UBERON:0000161;7.73e-11;19!UBERON:0000166;7.73e-11;19!UBERON:0000486;1.29e-10;12!UBERON:0000165;2.83e-10;28!UBERON:0001041;2.48e-09;14!UBERON:0001949;2.94e-09;3!UBERON:0000365;3.84e-09;5!UBERON:0005910;1.28e-07;6!UBERON:0001708;8.83e-07;4!UBERON:0008895;8.83e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,1.06e-13,22;UBERON:0001044,4.48e-12,6;UBERON:0003293,4.48e-12,6;UBERON:0003294,4.48e-12,6;UBERON:0010047,4.48e-12,6;UBERON:0000167,4.48e-12,6;UBERON:0000161,8.24e-11,36;UBERON:0000033,1.41e-10,56;UBERON:0000153,1.68e-10,62;UBERON:0007811,1.68e-10,62;UBERON:0000165,8.44e-10,29;UBERON:0000930,8.44e-10,29;UBERON:0003102,9.47e-10,99;UBERON:0000365,3.25e-09,5;UBERON:0001949,3.46e-09,3;UBERON:0001004,4.76e-08,74;UBERON:0005910,1.12e-07,6;UBERON:0001444,3.95e-07,49;UBERON:0003408,4.40e-07,10;UBERON:0001708,8.26e-07,4;UBERON:0008895,8.26e-07,4;UBERON:0004119,9.11e-07,160;UBERON:0000925,9.11e-07,160;UBERON:0006595,9.11e-07,160 | |||
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| ||
|short_description=p@chr6:138413333..138413389,- | |short_description=p@chr6:138413333..138413389,- | ||
}} | }} |
Latest revision as of 20:06, 30 July 2015
Short description: | p@chr6:138413333..138413389, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:138413333..138413389, - |
Coexpression cluster: | C1043_keratoacanthoma_Prostate_tongue_amniotic_salivary_skin_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.69e-14 | 42 |
general ecto-epithelial cell | 2.84e-12 | 14 |
endodermal cell | 1.48e-11 | 58 |
transitional epithelial cell | 1.63e-11 | 4 |
urothelial cell | 1.63e-11 | 4 |
acinar cell | 2.35e-10 | 5 |
epithelial cell of alimentary canal | 3.11e-10 | 20 |
acinar cell of salivary gland | 4.43e-10 | 3 |
gingival epithelial cell | 3.46e-09 | 3 |
epithelial cell | 3.84e-09 | 253 |
epithelial cell of Malassez | 5.89e-09 | 3 |
protein secreting cell | 1.29e-08 | 6 |
corneal epithelial cell | 2.95e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
oral opening | 1.06e-13 | 22 |
saliva-secreting gland | 4.48e-12 | 6 |
gland of oral region | 4.48e-12 | 6 |
gland of foregut | 4.48e-12 | 6 |
oral gland | 4.48e-12 | 6 |
oral cavity | 4.48e-12 | 6 |
orifice | 8.24e-11 | 36 |
head | 1.41e-10 | 56 |
anterior region of body | 1.68e-10 | 62 |
craniocervical region | 1.68e-10 | 62 |
mouth | 8.44e-10 | 29 |
stomodeum | 8.44e-10 | 29 |
surface structure | 9.47e-10 | 99 |
urothelium | 3.25e-09 | 5 |
gingival epithelium | 3.46e-09 | 3 |
respiratory system | 4.76e-08 | 74 |
transitional epithelium | 1.12e-07 | 6 |
subdivision of head | 3.95e-07 | 49 |
gland of gut | 4.40e-07 | 10 |
jaw skeleton | 8.26e-07 | 4 |
splanchnocranium | 8.26e-07 | 4 |
endoderm-derived structure | 9.11e-07 | 160 |
endoderm | 9.11e-07 | 160 |
presumptive endoderm | 9.11e-07 | 160 |