FFCP PHASE1:Hg19::chr7:20259717..20259736,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:20259717..20259736,- | |||
|coexpression_cluster_id=C2741 | |coexpression_cluster_id=C2741 | ||
|description=CAGE_peak_at_chr7:20259717..20259736,- | |description=CAGE_peak_at_chr7:20259717..20259736,- | ||
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|ontology_enrichment_celltype=CL:0002087!1.54e-43!119;CL:0002057!2.90e-43!42;CL:0002031!1.47e-41!124;CL:0000860!4.23e-40!45;CL:0000738!1.30e-38!140;CL:0000945!1.31e-35!24;CL:0000826!1.31e-35!24;CL:0000037!2.70e-30!172;CL:0000566!2.70e-30!172;CL:0002032!9.63e-30!165;CL:0000837!9.63e-30!165;CL:0002009!5.95e-29!65;CL:0000988!2.73e-28!182;CL:0002194!6.03e-27!63;CL:0000576!6.03e-27!63;CL:0000040!6.03e-27!63;CL:0000559!6.03e-27!63;CL:0000557!3.59e-26!71;CL:0000839!7.11e-24!70;CL:0000766!1.10e-21!76;CL:0000763!4.43e-15!112;CL:0000049!4.43e-15!112;CL:0000838!5.36e-15!52;CL:0000542!1.15e-14!53;CL:0000051!1.15e-14!53;CL:0000785!1.74e-11!2;CL:0000955!1.74e-11!2;CL:0000818!1.74e-11!2;CL:0000954!1.74e-11!2;CL:0000816!1.74e-11!2;CL:0000134!3.22e-11!358;CL:0002320!7.09e-11!365;CL:0002393!4.57e-10!9;CL:0002397!4.57e-10!9;CL:0000219!1.14e-09!390;CL:0000236!1.92e-09!14;CL:0000048!3.19e-08!430;CL:0000723!5.12e-08!436;CL:0000817!6.06e-08!3;CL:0000034!9.45e-08!444 | |ontology_enrichment_celltype=CL:0002087!1.54e-43!119;CL:0002057!2.90e-43!42;CL:0002031!1.47e-41!124;CL:0000860!4.23e-40!45;CL:0000738!1.30e-38!140;CL:0000945!1.31e-35!24;CL:0000826!1.31e-35!24;CL:0000037!2.70e-30!172;CL:0000566!2.70e-30!172;CL:0002032!9.63e-30!165;CL:0000837!9.63e-30!165;CL:0002009!5.95e-29!65;CL:0000988!2.73e-28!182;CL:0002194!6.03e-27!63;CL:0000576!6.03e-27!63;CL:0000040!6.03e-27!63;CL:0000559!6.03e-27!63;CL:0000557!3.59e-26!71;CL:0000839!7.11e-24!70;CL:0000766!1.10e-21!76;CL:0000763!4.43e-15!112;CL:0000049!4.43e-15!112;CL:0000838!5.36e-15!52;CL:0000542!1.15e-14!53;CL:0000051!1.15e-14!53;CL:0000785!1.74e-11!2;CL:0000955!1.74e-11!2;CL:0000818!1.74e-11!2;CL:0000954!1.74e-11!2;CL:0000816!1.74e-11!2;CL:0000134!3.22e-11!358;CL:0002320!7.09e-11!365;CL:0002393!4.57e-10!9;CL:0002397!4.57e-10!9;CL:0000219!1.14e-09!390;CL:0000236!1.92e-09!14;CL:0000048!3.19e-08!430;CL:0000723!5.12e-08!436;CL:0000817!6.06e-08!3;CL:0000034!9.45e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.85e-23;33!CL:0002057;1.85e-23;33!CL:0000473;7.70e-20;39!CL:0000234;7.70e-20;39!CL:0000576;1.04e-14;48!CL:0002087;7.66e-14;104!CL:0000766;4.48e-13;69!CL:0002393;2.04e-10;6!CL:0002397;2.04e-10;6!CL:0000945;7.22e-10;24 | |ontology_enrichment_celltype_v019=CL:0000860;1.85e-23;33!CL:0002057;1.85e-23;33!CL:0000473;7.70e-20;39!CL:0000234;7.70e-20;39!CL:0000576;1.04e-14;48!CL:0002087;7.66e-14;104!CL:0000766;4.48e-13;69!CL:0002393;2.04e-10;6!CL:0002397;2.04e-10;6!CL:0000945;7.22e-10;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.25e-32,42;CL:0002057,1.25e-32,42;CL:0000473,1.91e-28,48;CL:0000234,1.91e-28,48;CL:0002087,1.13e-22,115;CL:0002194,1.41e-22,59;CL:0000576,1.41e-22,59;CL:0000040,1.41e-22,59;CL:0000559,1.41e-22,59;CL:0002009,8.08e-22,61;CL:0002031,1.10e-21,120;CL:0000839,4.03e-20,66;CL:0000557,8.22e-20,67;CL:0000738,5.24e-19,136;CL:0000766,2.18e-18,72;CL:0002032,7.09e-16,161;CL:0000837,7.09e-16,161;CL:0000037,3.65e-15,168;CL:0000988,2.49e-14,177;CL:0000763,5.56e-12,108;CL:0000049,5.56e-12,108;CL:0000945,8.21e-10,24;CL:0000826,8.21e-10,24;CL:0002393,2.86e-07,9;CL:0002397,2.86e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.73e-21;42 | |ontology_enrichment_development_v019=CL:0002057;6.73e-21;42 | ||
|ontology_enrichment_disease=DOID:0060058!1.12e-08!10 | |ontology_enrichment_disease=DOID:0060058!1.12e-08!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.07e-25!80;UBERON:0001474!3.52e-23!86;UBERON:0002390!4.15e-23!102;UBERON:0003061!4.15e-23!102;UBERON:0002193!1.28e-20!112;UBERON:0004765!4.29e-19!101;UBERON:0001434!4.29e-19!101;UBERON:0002405!4.42e-18!115;UBERON:0002384!2.08e-10!375;UBERON:0002204!8.24e-10!167;UBERON:0003081!2.23e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!3.07e-25!80;UBERON:0001474!3.52e-23!86;UBERON:0002390!4.15e-23!102;UBERON:0003061!4.15e-23!102;UBERON:0002193!1.28e-20!112;UBERON:0004765!4.29e-19!101;UBERON:0001434!4.29e-19!101;UBERON:0002405!4.42e-18!115;UBERON:0002384!2.08e-10!375;UBERON:0002204!8.24e-10!167;UBERON:0003081!2.23e-08!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.20e-17,76;UBERON:0001474,4.69e-16,82;UBERON:0004765,1.48e-14,90;UBERON:0002405,4.65e-14,93;UBERON:0002390,2.69e-13,98;UBERON:0003061,2.69e-13,98;UBERON:0001434,5.17e-13,100;UBERON:0002193,5.56e-12,108;UBERON:0002204,2.20e-07,167 | |||
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|short_description=p@chr7:20259717..20259736,- | |short_description=p@chr7:20259717..20259736,- | ||
}} | }} |
Latest revision as of 08:22, 31 July 2015
Short description: | p@chr7:20259717..20259736, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:20259717..20259736, - |
Coexpression cluster: | C2741_B_CD14_splenic_immature_b_Mast_xeroderma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.25e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-32 | 42 |
defensive cell | 1.91e-28 | 48 |
phagocyte | 1.91e-28 | 48 |
nongranular leukocyte | 1.13e-22 | 115 |
monopoietic cell | 1.41e-22 | 59 |
monocyte | 1.41e-22 | 59 |
monoblast | 1.41e-22 | 59 |
promonocyte | 1.41e-22 | 59 |
macrophage dendritic cell progenitor | 8.08e-22 | 61 |
hematopoietic lineage restricted progenitor cell | 1.10e-21 | 120 |
myeloid lineage restricted progenitor cell | 4.03e-20 | 66 |
granulocyte monocyte progenitor cell | 8.22e-20 | 67 |
leukocyte | 5.24e-19 | 136 |
myeloid leukocyte | 2.18e-18 | 72 |
hematopoietic oligopotent progenitor cell | 7.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.09e-16 | 161 |
hematopoietic stem cell | 3.65e-15 | 168 |
hematopoietic cell | 2.49e-14 | 177 |
myeloid cell | 5.56e-12 | 108 |
common myeloid progenitor | 5.56e-12 | 108 |
lymphocyte of B lineage | 8.21e-10 | 24 |
pro-B cell | 8.21e-10 | 24 |
intermediate monocyte | 2.86e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.86e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.20e-17 | 76 |
bone element | 4.69e-16 | 82 |
skeletal element | 1.48e-14 | 90 |
immune system | 4.65e-14 | 93 |
hematopoietic system | 2.69e-13 | 98 |
blood island | 2.69e-13 | 98 |
skeletal system | 5.17e-13 | 100 |
hemolymphoid system | 5.56e-12 | 108 |
musculoskeletal system | 2.20e-07 | 167 |