FFCP PHASE1:Hg19::chr7:2701909..2701921,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:2701909..2701921,-
|short_description=p@chr7:2701909..2701921,-
|description=CAGE_peak_at_chr7:2701909..2701921,-
|association_with_transcript=NA
|EntrezG...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:2701909..2701921,- | |||
|description=CAGE_peak_at_chr7:2701909..2701921,- | |||
|id=chr7:2701909..2701921,- | |||
|ontology_enrichment_celltype=CL:0000220!1.63e-09!246;CL:0002321!3.01e-09!248;CL:0000133!1.14e-07!59;CL:0000221!1.33e-07!71;CL:0000333!1.46e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.92e-29;10!CL:0002567;5.49e-25;3!CL:0000147;5.95e-21;14!CL:0002566;2.25e-19;1!CL:0002591;2.25e-19;1!CL:0000710;8.55e-15;20!CL:0000075;4.72e-11;27!CL:0002077;4.08e-08;34!CL:0000346;2.47e-07;3!CL:1000428;2.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.16e-29,10;CL:0000541,3.16e-29,10;CL:0002567,4.87e-25,3;CL:0000147,5.11e-21,14;CL:0002566,1.56e-19,1;CL:0002591,4.69e-19,1;CL:0000710,7.69e-15,20;CL:0000075,4.37e-11,27;CL:0000333,1.26e-10,41;CL:0002077,7.23e-09,34;CL:0000133,1.69e-07,59;CL:0000346,2.32e-07,3;CL:1000428,2.32e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;2.27e-10;2!UBERON:0000078;2.27e-10;2!UBERON:0002012;2.27e-10;2!UBERON:0008886;2.27e-10;2!UBERON:0000412;2.47e-07;3!UBERON:0001992;2.47e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,1.43e-10,2;UBERON:0000078,3.27e-10,2;UBERON:0007497,3.27e-10,2;UBERON:0003643,3.27e-10,2;UBERON:0003504,3.27e-10,2;UBERON:0003469,3.27e-10,2;UBERON:0003496,3.27e-10,2;UBERON:0002012,3.27e-10,2;UBERON:0008886,3.27e-10,2;UBERON:0007303,3.27e-10,2;UBERON:0002061,3.27e-10,2;UBERON:0005432,3.27e-10,2;UBERON:0004363,3.27e-10,2;UBERON:0000412,2.32e-07,3;UBERON:0001992,2.32e-07,3;UBERON:0004145,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,1.39560233594486,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.651032612147555,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.263504357079378,0.130979075497713,0.364295288292542,0,0,0,0.797747763113191,0,0,0,0,0,0.347140501607594,0,0.838998872419812,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0.184099797284599,0.161646056818812,0,0,0.339121184620975,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0.36497735907583,1.56449532329816,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0.738651018262192,0.234004265139238,0.445893486866185,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,1.65094525159639,1.14596527667483,0,1.71072446022705,0.514137463516618,0,1.42913216315289,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,1.00451418286425,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0.535286966391485,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0.686286847621712,0,0,0.213455115606889,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.510281115829547,0,0,0,0.501689773854853,0,0,0.671624264166535,0,0,0.512900250232778,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0.55597265731176,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0.404364963146632,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.409499734223957,0,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0.392996164052485,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0,0,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0.124980407962107,0,0.285465333544967,0,0,0,0.149254802886874,0.467426619694449,0.554805861502613,0,0.251567901752575,0,0.228840068396924,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0.139879507719444,0,0.127894371303652,0,0,0.109209638192014,0.169732529954025,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0.874238242015829,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0.5290268405154,0.371995018166751,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,1.39560233594486,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.651032612147555,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.263504357079378,0.130979075497713,0.364295288292542,0,0,0,0.797747763113191,0,0,0,0,0,0.347140501607594,0,0.838998872419812,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0.184099797284599,0.161646056818812,0,0,0.339121184620975,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0.36497735907583,1.56449532329816,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0.738651018262192,0.234004265139238,0.445893486866185,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,1.65094525159639,1.14596527667483,0,1.71072446022705,0.514137463516618,0,1.42913216315289,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,1.00451418286425,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0.535286966391485,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0.686286847621712,0,0,0.213455115606889,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.510281115829547,0,0,0,0.501689773854853,0,0,0.671624264166535,0,0,0.512900250232778,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0.55597265731176,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0.404364963146632,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.409499734223957,0,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0.392996164052485,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0,0,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0.124980407962107,0,0.285465333544967,0,0,0,0.149254802886874,0.467426619694449,0.554805861502613,0,0.251567901752575,0,0.228840068396924,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0.139879507719444,0,0.127894371303652,0,0,0.109209638192014,0.169732529954025,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0.874238242015829,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0.5290268405154,0.371995018166751,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr7:2701909..2701921,- | |||
}} | }} |
Latest revision as of 08:59, 31 July 2015
Short description: | p@chr7:2701909..2701921, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:2701909..2701921, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.16e-29 | 10 |
melanoblast | 3.16e-29 | 10 |
light melanocyte | 4.87e-25 | 3 |
pigment cell | 5.11e-21 | 14 |
dark melanocyte | 1.56e-19 | 1 |
smooth muscle cell of the pulmonary artery | 4.69e-19 | 1 |
neurecto-epithelial cell | 7.69e-15 | 20 |
columnar/cuboidal epithelial cell | 4.37e-11 | 27 |
migratory neural crest cell | 1.26e-10 | 41 |
ecto-epithelial cell | 7.23e-09 | 34 |
neurectodermal cell | 1.69e-07 | 59 |
hair follicle dermal papilla cell | 2.32e-07 | 3 |
stem cell of epidermis | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
amygdala | 1.43e-10 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.27e-10 | 2 |
developing epithelial placode | 3.27e-10 | 2 |
respiratory system arterial blood vessel | 3.27e-10 | 2 |
respiratory system blood vessel | 3.27e-10 | 2 |
respiratory system artery | 3.27e-10 | 2 |
head blood vessel | 3.27e-10 | 2 |
pulmonary artery | 3.27e-10 | 2 |
pulmonary vascular system | 3.27e-10 | 2 |
pharyngeal vasculature | 3.27e-10 | 2 |
truncus arteriosus | 3.27e-10 | 2 |
aortic sac | 3.27e-10 | 2 |
pharyngeal arch artery | 3.27e-10 | 2 |
dermal papilla | 2.32e-07 | 3 |
papillary layer of dermis | 2.32e-07 | 3 |
outflow tract | 3.16e-07 | 3 |