FFCP PHASE1:Hg19::chr8:119905427..119905438,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:119905427..119905438,- | |||
|coexpression_cluster_id=C510 | |||
|description=CAGE_peak_at_chr8:119905427..119905438,- | |description=CAGE_peak_at_chr8:119905427..119905438,- | ||
|id=chr8:119905427..119905438,- | |id=chr8:119905427..119905438,- | ||
|ontology_enrichment_celltype=CL:0000946!4.91e-11!1;CL:0000786!4.91e-11!1;CL:0000980!4.91e-11!1;CL:0002552!8.17e-09!5;CL:0002620!2.89e-07!23 | |ontology_enrichment_celltype=CL:0000946!4.91e-11!1;CL:0000786!4.91e-11!1;CL:0000980!4.91e-11!1;CL:0002552!8.17e-09!5;CL:0002620!2.89e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000054;3.11e-21;2!CL:0000137;3.11e-21;2!CL:0000092;3.11e-21;2!CL:0002541;1.83e-14;3!CL:0002620;6.52e-08;23!CL:0002556;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,3.11e-21,2;CL:0000137,3.11e-21,2;CL:0000092,3.11e-21,2;CL:0002541,2.09e-14,3;CL:0002556,6.34e-08,6;CL:0002620,6.52e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!8.62e-12!1;DOID:3165!8.62e-12!1;DOID:0060121!8.62e-12!1;DOID:2438!8.62e-12!1;DOID:4418!8.62e-12!1;DOID:3369!1.45e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:0060085;6.62e-41;1!DOID:3165;6.62e-41;1!DOID:0060121;6.62e-41;1!DOID:2438;6.62e-41;1!DOID:4418;6.62e-41;1!DOID:200;3.11e-21;2!DOID:4305;3.11e-21;2!DOID:0060072;2.53e-11;4!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.62e-41,1;DOID:3165,6.62e-41,1;DOID:0060121,6.62e-41,1;DOID:2438,6.62e-41,1;DOID:4418,6.62e-41,1;DOID:200,3.11e-21,2;DOID:4305,3.11e-21,2;DOID:0060072,2.53e-11,4;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002363!6.00e-11!1;UBERON:0007647!6.00e-11!1;UBERON:0010115!6.00e-11!1 | |ontology_enrichment_uberon=UBERON:0002363!6.00e-11!1;UBERON:0007647!6.00e-11!1;UBERON:0010115!6.00e-11!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.83e-14;3!UBERON:0000920;1.83e-14;3!UBERON:0000014;2.53e-11;4!UBERON:0001758;6.78e-08;6!UBERON:0003672;6.78e-08;6!UBERON:0003129;6.04e-07;7!UBERON:0002097;6.44e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.09e-14,3;UBERON:0000014,2.53e-11,4;UBERON:0002097,1.56e-09,41;UBERON:0002199,1.40e-08,46;UBERON:0002416,1.40e-08,46;UBERON:0001758,6.34e-08,6;UBERON:0003672,6.34e-08,6;UBERON:0003102,4.54e-07,99;UBERON:0003129,5.70e-07,7;UBERON:0003124,6.39e-07,7 | |||
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|short_description=p@chr8:119905427..119905438,- | |short_description=p@chr8:119905427..119905438,- | ||
}} | }} |
Latest revision as of 14:22, 31 July 2015
Short description: | p@chr8:119905427..119905438, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:119905427..119905438, - |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 3.11e-21 | 2 |
osteocyte | 3.11e-21 | 2 |
osteoclast | 3.11e-21 | 2 |
chorionic membrane mesenchymal stem cell | 2.09e-14 | 3 |
fibroblast of periodontium | 6.34e-08 | 6 |
skin fibroblast | 6.52e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.09e-14 | 3 |
zone of skin | 2.53e-11 | 4 |
skin of body | 1.56e-09 | 41 |
integument | 1.40e-08 | 46 |
integumental system | 1.40e-08 | 46 |
periodontium | 6.34e-08 | 6 |
dentition | 6.34e-08 | 6 |
surface structure | 4.54e-07 | 99 |
skull | 5.70e-07 | 7 |
chorion | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.62e-41 | 1 |
skin benign neoplasm | 6.62e-41 | 1 |
integumentary system benign neoplasm | 6.62e-41 | 1 |
dermis tumor | 6.62e-41 | 1 |
cutaneous fibrous histiocytoma | 6.62e-41 | 1 |
giant cell tumor | 3.11e-21 | 2 |
bone giant cell tumor | 3.11e-21 | 2 |
benign neoplasm | 2.53e-11 | 4 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |