FFCP PHASE1:Hg19::chr8:81399734..81399738,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:81399734..81399738,- | |||
|coexpression_cluster_id=C1216 | |coexpression_cluster_id=C1216 | ||
|description=CAGE_peak_at_chr8:81399734..81399738,- | |description=CAGE_peak_at_chr8:81399734..81399738,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000557!9.98e-19!71;CL:0002009!7.74e-17!65;CL:0002057!3.03e-16!42;CL:0000839!3.20e-16!70;CL:0000766!2.44e-15!76;CL:0002194!9.45e-15!63;CL:0000576!9.45e-15!63;CL:0000040!9.45e-15!63;CL:0000559!9.45e-15!63;CL:0000860!1.15e-14!45;CL:0002393!1.87e-11!9;CL:0002397!1.87e-11!9;CL:0000738!7.48e-11!140;CL:0000763!1.64e-10!112;CL:0000049!1.64e-10!112;CL:0002031!4.25e-09!124;CL:0002087!4.40e-08!119;CL:0000037!2.63e-07!172;CL:0000566!2.63e-07!172;CL:0000988!8.00e-07!182 | |ontology_enrichment_celltype=CL:0000557!9.98e-19!71;CL:0002009!7.74e-17!65;CL:0002057!3.03e-16!42;CL:0000839!3.20e-16!70;CL:0000766!2.44e-15!76;CL:0002194!9.45e-15!63;CL:0000576!9.45e-15!63;CL:0000040!9.45e-15!63;CL:0000559!9.45e-15!63;CL:0000860!1.15e-14!45;CL:0002393!1.87e-11!9;CL:0002397!1.87e-11!9;CL:0000738!7.48e-11!140;CL:0000763!1.64e-10!112;CL:0000049!1.64e-10!112;CL:0002031!4.25e-09!124;CL:0002087!4.40e-08!119;CL:0000037!2.63e-07!172;CL:0000566!2.63e-07!172;CL:0000988!8.00e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.29e-50;2!CL:0001016;1.29e-50;2!CL:0002393;1.04e-37;6!CL:0002397;1.04e-37;6!CL:0000453;5.72e-21;5!CL:0000840;1.17e-17;5!CL:0000990;4.07e-12;8!CL:0000451;4.32e-10;10!CL:0000226;1.60e-09;3!CL:0000842;1.60e-09;3!CL:0002577;1.60e-09;3 | |ontology_enrichment_celltype_v019=CL:0001014;1.29e-50;2!CL:0001016;1.29e-50;2!CL:0002393;1.04e-37;6!CL:0002397;1.04e-37;6!CL:0000453;5.72e-21;5!CL:0000840;1.17e-17;5!CL:0000990;4.07e-12;8!CL:0000451;4.32e-10;10!CL:0000226;1.60e-09;3!CL:0000842;1.60e-09;3!CL:0002577;1.60e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.14e-50,2;CL:0001016,1.14e-50,2;CL:0002393,2.09e-25,9;CL:0002397,2.09e-25,9;CL:0000453,5.44e-21,5;CL:0000840,1.12e-17,5;CL:0001029,1.12e-17,5;CL:0002009,1.62e-14,61;CL:0000557,3.00e-13,67;CL:0000990,3.95e-12,8;CL:0000451,4.22e-10,10;CL:0000860,7.40e-10,42;CL:0002057,7.40e-10,42;CL:0002577,1.41e-09,3;CL:0000226,1.54e-09,3;CL:0000842,1.54e-09,3;CL:0000738,7.15e-09,136;CL:0000473,1.13e-08,48;CL:0000234,1.13e-08,48;CL:0000763,2.73e-08,108;CL:0000049,2.73e-08,108;CL:0002031,1.82e-07,120;CL:0000037,3.59e-07,168;CL:0002194,5.19e-07,59;CL:0000576,5.19e-07,59;CL:0000040,5.19e-07,59;CL:0000559,5.19e-07,59;CL:0000988,8.41e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.43e-09;42 | |ontology_enrichment_development_v019=CL:0002057;4.43e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!3.71e-16!101;UBERON:0001434!3.71e-16!101;UBERON:0002371!1.96e-15!80;UBERON:0002390!4.55e-15!102;UBERON:0003061!4.55e-15!102;UBERON:0001474!1.56e-14!86;UBERON:0002193!1.67e-13!112;UBERON:0002405!1.29e-09!115;UBERON:0002204!1.63e-08!167 | |ontology_enrichment_uberon=UBERON:0004765!3.71e-16!101;UBERON:0001434!3.71e-16!101;UBERON:0002371!1.96e-15!80;UBERON:0002390!4.55e-15!102;UBERON:0003061!4.55e-15!102;UBERON:0001474!1.56e-14!86;UBERON:0002193!1.67e-13!112;UBERON:0002405!1.29e-09!115;UBERON:0002204!1.63e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.86e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001987;1.86e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.73e-12,98;UBERON:0003061,2.73e-12,98;UBERON:0002371,1.03e-11,76;UBERON:0002193,3.66e-11,108;UBERON:0001474,7.14e-11,82;UBERON:0004765,6.36e-10,90;UBERON:0002405,1.31e-09,93;UBERON:0001434,6.05e-09,100;UBERON:0003081,9.83e-08,203;UBERON:0001987,1.69e-07,4;UBERON:0004340,1.69e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,3.81034450193269,2.17010870715852,0,0.32389366601898,0,0,0.377875943688809,0,0.697287110717054,0.411167888021826,0.619412741790207,0.575384784644301,0,0,0.344745680736619,0,0,0,0,0.674170453335254,0,0,0.639337125799041,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0,0,0.736555271975129,0.316462387440884,0.211255286311942,0.425208599930087,1.25795187305026,0.673971786878971,0.750884464207532,0.48217676009124,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,0.621984346622316,0.720599767084807,0.75745460055828,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.106727557803444,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.331737779793674,0,0,0,0,0,0,0.23056390438806,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,2.4747128070665,4.6428117273477,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0.218531143927391,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,3.81034450193269,2.17010870715852,0,0.32389366601898,0,0,0.377875943688809,0,0.697287110717054,0.411167888021826,0.619412741790207,0.575384784644301,0,0,0.344745680736619,0,0,0,0,0.674170453335254,0,0,0.639337125799041,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0,0,0.736555271975129,0.316462387440884,0.211255286311942,0.425208599930087,1.25795187305026,0.673971786878971,0.750884464207532,0.48217676009124,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,0.621984346622316,0.720599767084807,0.75745460055828,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.106727557803444,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.331737779793674,0,0,0,0,0,0,0.23056390438806,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,2.4747128070665,4.6428117273477,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0.218531143927391,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr8:81399734..81399738,- | |short_description=p@chr8:81399734..81399738,- | ||
}} | }} |
Latest revision as of 20:05, 31 July 2015
Short description: | p@chr8:81399734..81399738, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:81399734..81399738, - |
Coexpression cluster: | C1216_immature_CD14_Natural_Peripheral_Mast_CD34_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.14e-50 | 2 |
immature CD1a-positive Langerhans cell | 1.14e-50 | 2 |
intermediate monocyte | 2.09e-25 | 9 |
CD14-positive, CD16-positive monocyte | 2.09e-25 | 9 |
Langerhans cell | 5.44e-21 | 5 |
immature conventional dendritic cell | 1.12e-17 | 5 |
common dendritic progenitor | 1.12e-17 | 5 |
macrophage dendritic cell progenitor | 1.62e-14 | 61 |
granulocyte monocyte progenitor cell | 3.00e-13 | 67 |
conventional dendritic cell | 3.95e-12 | 8 |
dendritic cell | 4.22e-10 | 10 |
classical monocyte | 7.40e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.40e-10 | 42 |
placental epithelial cell | 1.41e-09 | 3 |
single nucleate cell | 1.54e-09 | 3 |
mononuclear cell | 1.54e-09 | 3 |
leukocyte | 7.15e-09 | 136 |
defensive cell | 1.13e-08 | 48 |
phagocyte | 1.13e-08 | 48 |
myeloid cell | 2.73e-08 | 108 |
common myeloid progenitor | 2.73e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 1.82e-07 | 120 |
hematopoietic stem cell | 3.59e-07 | 168 |
monopoietic cell | 5.19e-07 | 59 |
monocyte | 5.19e-07 | 59 |
monoblast | 5.19e-07 | 59 |
promonocyte | 5.19e-07 | 59 |
hematopoietic cell | 8.41e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.73e-12 | 98 |
blood island | 2.73e-12 | 98 |
bone marrow | 1.03e-11 | 76 |
hemolymphoid system | 3.66e-11 | 108 |
bone element | 7.14e-11 | 82 |
skeletal element | 6.36e-10 | 90 |
immune system | 1.31e-09 | 93 |
skeletal system | 6.05e-09 | 100 |
lateral plate mesoderm | 9.83e-08 | 203 |
placenta | 1.69e-07 | 4 |
allantois | 1.69e-07 | 4 |