FFCP PHASE1:Hg19::chr9:115950788..115950806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:115950788..115950806,+ | |||
|coexpression_cluster_id=C4791 | |||
|description=CAGE_peak_at_chr9:115950788..115950806,+ | |description=CAGE_peak_at_chr9:115950788..115950806,+ | ||
|id=chr9:115950788..115950806,+ | |id=chr9:115950788..115950806,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.25e-62!42;CL:0000860!1.85e-57!45;CL:0000839!3.03e-54!70;CL:0000557!3.06e-53!71;CL:0000766!4.97e-53!76;CL:0002194!5.58e-52!63;CL:0000576!5.58e-52!63;CL:0000040!5.58e-52!63;CL:0000559!5.58e-52!63;CL:0002009!6.80e-50!65;CL:0000763!5.81e-33!112;CL:0000049!5.81e-33!112;CL:0002031!2.42e-23!124;CL:0000738!6.34e-22!140;CL:0002087!2.71e-21!119;CL:0000134!3.47e-18!358;CL:0002320!2.41e-17!365;CL:0002032!6.74e-17!165;CL:0000837!6.74e-17!165;CL:0000037!2.50e-16!172;CL:0000566!2.50e-16!172;CL:0000219!7.19e-16!390;CL:0000988!2.96e-15!182;CL:0000048!1.31e-13!430;CL:0000723!4.60e-13!436;CL:0002393!7.72e-13!9;CL:0002397!7.72e-13!9;CL:0000034!2.31e-12!444;CL:0000063!1.10e-10!578;CL:0000144!1.03e-08!625;CL:0000548!2.08e-07!679;CL:0000004!2.08e-07!679;CL:0000255!2.08e-07!679;CL:0000012!3.06e-07!682;CL:0002371!5.22e-07!591 | |ontology_enrichment_celltype=CL:0002057!1.25e-62!42;CL:0000860!1.85e-57!45;CL:0000839!3.03e-54!70;CL:0000557!3.06e-53!71;CL:0000766!4.97e-53!76;CL:0002194!5.58e-52!63;CL:0000576!5.58e-52!63;CL:0000040!5.58e-52!63;CL:0000559!5.58e-52!63;CL:0002009!6.80e-50!65;CL:0000763!5.81e-33!112;CL:0000049!5.81e-33!112;CL:0002031!2.42e-23!124;CL:0000738!6.34e-22!140;CL:0002087!2.71e-21!119;CL:0000134!3.47e-18!358;CL:0002320!2.41e-17!365;CL:0002032!6.74e-17!165;CL:0000837!6.74e-17!165;CL:0000037!2.50e-16!172;CL:0000566!2.50e-16!172;CL:0000219!7.19e-16!390;CL:0000988!2.96e-15!182;CL:0000048!1.31e-13!430;CL:0000723!4.60e-13!436;CL:0002393!7.72e-13!9;CL:0002397!7.72e-13!9;CL:0000034!2.31e-12!444;CL:0000063!1.10e-10!578;CL:0000144!1.03e-08!625;CL:0000548!2.08e-07!679;CL:0000004!2.08e-07!679;CL:0000255!2.08e-07!679;CL:0000012!3.06e-07!682;CL:0002371!5.22e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-112;33!CL:0002057;1.01e-112;33!CL:0000473;3.70e-93;39!CL:0000234;3.70e-93;39!CL:0000576;4.76e-54;48!CL:0000766;5.48e-36;69!CL:0000763;1.47e-16;100!CL:0002087;1.61e-13;104!CL:0000738;1.05e-10;136!CL:0002573;5.63e-08;2!CL:0000235;9.19e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.26e-99,48;CL:0000234,1.26e-99,48;CL:0000860,5.43e-94,42;CL:0002057,5.43e-94,42;CL:0002194,2.02e-83,59;CL:0000576,2.02e-83,59;CL:0000040,2.02e-83,59;CL:0000559,2.02e-83,59;CL:0002009,1.64e-80,61;CL:0000839,7.45e-79,66;CL:0000557,1.36e-77,67;CL:0000766,8.26e-72,72;CL:0000763,8.26e-46,108;CL:0000049,8.26e-46,108;CL:0002031,1.42e-40,120;CL:0002087,7.41e-40,115;CL:0000738,5.08e-35,136;CL:0002032,1.56e-28,161;CL:0000837,1.56e-28,161;CL:0000037,4.64e-27,168;CL:0000988,2.46e-25,177;CL:0000219,5.48e-13,386;CL:0000134,9.09e-13,354;CL:0002320,2.25e-12,361;CL:0000048,2.74e-09,427;CL:0000723,4.71e-09,433;CL:0000034,9.46e-09,441;CL:0002573,5.64e-08,2;CL:0000235,1.08e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-69;42!CL:0000049;5.40e-14;108 | |||
|ontology_enrichment_disease=DOID:2394!1.11e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.72e-47!80;UBERON:0001474!1.34e-44!86;UBERON:0004765!4.47e-37!101;UBERON:0001434!4.47e-37!101;UBERON:0002390!2.41e-36!102;UBERON:0003061!2.41e-36!102;UBERON:0002193!6.08e-33!112;UBERON:0002405!9.17e-32!115;UBERON:0002204!5.24e-19!167;UBERON:0002384!3.36e-16!375;UBERON:0003081!4.11e-14!216;UBERON:0002118!6.69e-08!5;UBERON:0004532!6.69e-08!5;UBERON:0000992!9.30e-07!13 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.31e-72,76;UBERON:0001474,3.18e-66,82;UBERON:0004765,8.66e-60,90;UBERON:0002405,1.17e-57,93;UBERON:0002390,2.16e-54,98;UBERON:0003061,2.16e-54,98;UBERON:0001434,3.55e-53,100;UBERON:0002193,9.29e-49,108;UBERON:0002204,3.79e-29,167;UBERON:0003081,2.24e-24,203;UBERON:0000926,2.82e-15,315;UBERON:0004120,2.82e-15,315;UBERON:0006603,2.82e-15,315;UBERON:0002384,7.74e-12,371 | |||
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|short_description=p@chr9:115950788..115950806,+ | |short_description=p@chr9:115950788..115950806,+ | ||
}} | }} |
Latest revision as of 21:54, 31 July 2015
Short description: | p@chr9:115950788..115950806, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:115950788..115950806, + |
Coexpression cluster: | C4791_schwannoma_CD14_mesenchymal_Mast_Fibroblast_Mesothelial_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.26e-99 | 48 |
phagocyte | 1.26e-99 | 48 |
classical monocyte | 5.43e-94 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.43e-94 | 42 |
monopoietic cell | 2.02e-83 | 59 |
monocyte | 2.02e-83 | 59 |
monoblast | 2.02e-83 | 59 |
promonocyte | 2.02e-83 | 59 |
macrophage dendritic cell progenitor | 1.64e-80 | 61 |
myeloid lineage restricted progenitor cell | 7.45e-79 | 66 |
granulocyte monocyte progenitor cell | 1.36e-77 | 67 |
myeloid leukocyte | 8.26e-72 | 72 |
myeloid cell | 8.26e-46 | 108 |
common myeloid progenitor | 8.26e-46 | 108 |
hematopoietic lineage restricted progenitor cell | 1.42e-40 | 120 |
nongranular leukocyte | 7.41e-40 | 115 |
leukocyte | 5.08e-35 | 136 |
hematopoietic oligopotent progenitor cell | 1.56e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-28 | 161 |
hematopoietic stem cell | 4.64e-27 | 168 |
hematopoietic cell | 2.46e-25 | 177 |
motile cell | 5.48e-13 | 386 |
mesenchymal cell | 9.09e-13 | 354 |
connective tissue cell | 2.25e-12 | 361 |
multi fate stem cell | 2.74e-09 | 427 |
somatic stem cell | 4.71e-09 | 433 |
stem cell | 9.46e-09 | 441 |
Schwann cell | 5.64e-08 | 2 |
macrophage | 1.08e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.31e-72 | 76 |
bone element | 3.18e-66 | 82 |
skeletal element | 8.66e-60 | 90 |
immune system | 1.17e-57 | 93 |
hematopoietic system | 2.16e-54 | 98 |
blood island | 2.16e-54 | 98 |
skeletal system | 3.55e-53 | 100 |
hemolymphoid system | 9.29e-49 | 108 |
musculoskeletal system | 3.79e-29 | 167 |
lateral plate mesoderm | 2.24e-24 | 203 |
mesoderm | 2.82e-15 | 315 |
mesoderm-derived structure | 2.82e-15 | 315 |
presumptive mesoderm | 2.82e-15 | 315 |
connective tissue | 7.74e-12 | 371 |