FFCP PHASE1:Hg19::chr9:115950788..115950806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:115950788..115950806,+ | |||
|coexpression_cluster_id=C4791 | |coexpression_cluster_id=C4791 | ||
|description=CAGE_peak_at_chr9:115950788..115950806,+ | |description=CAGE_peak_at_chr9:115950788..115950806,+ | ||
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|ontology_enrichment_development_v019=CL:0002057;1.73e-69;42!CL:0000049;5.40e-14;108 | |ontology_enrichment_development_v019=CL:0002057;1.73e-69;42!CL:0000049;5.40e-14;108 | ||
|ontology_enrichment_disease=DOID:2394!1.11e-09!14 | |ontology_enrichment_disease=DOID:2394!1.11e-09!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.31e-72,76;UBERON:0001474,3.18e-66,82;UBERON:0004765,8.66e-60,90;UBERON:0002405,1.17e-57,93;UBERON:0002390,2.16e-54,98;UBERON:0003061,2.16e-54,98;UBERON:0001434,3.55e-53,100;UBERON:0002193,9.29e-49,108;UBERON:0002204,3.79e-29,167;UBERON:0003081,2.24e-24,203;UBERON:0000926,2.82e-15,315;UBERON:0004120,2.82e-15,315;UBERON:0006603,2.82e-15,315;UBERON:0002384,7.74e-12,371 | |||
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| ||
|short_description=p@chr9:115950788..115950806,+ | |short_description=p@chr9:115950788..115950806,+ | ||
}} | }} |
Latest revision as of 21:54, 31 July 2015
Short description: | p@chr9:115950788..115950806, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:115950788..115950806, + |
Coexpression cluster: | C4791_schwannoma_CD14_mesenchymal_Mast_Fibroblast_Mesothelial_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.26e-99 | 48 |
phagocyte | 1.26e-99 | 48 |
classical monocyte | 5.43e-94 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.43e-94 | 42 |
monopoietic cell | 2.02e-83 | 59 |
monocyte | 2.02e-83 | 59 |
monoblast | 2.02e-83 | 59 |
promonocyte | 2.02e-83 | 59 |
macrophage dendritic cell progenitor | 1.64e-80 | 61 |
myeloid lineage restricted progenitor cell | 7.45e-79 | 66 |
granulocyte monocyte progenitor cell | 1.36e-77 | 67 |
myeloid leukocyte | 8.26e-72 | 72 |
myeloid cell | 8.26e-46 | 108 |
common myeloid progenitor | 8.26e-46 | 108 |
hematopoietic lineage restricted progenitor cell | 1.42e-40 | 120 |
nongranular leukocyte | 7.41e-40 | 115 |
leukocyte | 5.08e-35 | 136 |
hematopoietic oligopotent progenitor cell | 1.56e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-28 | 161 |
hematopoietic stem cell | 4.64e-27 | 168 |
hematopoietic cell | 2.46e-25 | 177 |
motile cell | 5.48e-13 | 386 |
mesenchymal cell | 9.09e-13 | 354 |
connective tissue cell | 2.25e-12 | 361 |
multi fate stem cell | 2.74e-09 | 427 |
somatic stem cell | 4.71e-09 | 433 |
stem cell | 9.46e-09 | 441 |
Schwann cell | 5.64e-08 | 2 |
macrophage | 1.08e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.31e-72 | 76 |
bone element | 3.18e-66 | 82 |
skeletal element | 8.66e-60 | 90 |
immune system | 1.17e-57 | 93 |
hematopoietic system | 2.16e-54 | 98 |
blood island | 2.16e-54 | 98 |
skeletal system | 3.55e-53 | 100 |
hemolymphoid system | 9.29e-49 | 108 |
musculoskeletal system | 3.79e-29 | 167 |
lateral plate mesoderm | 2.24e-24 | 203 |
mesoderm | 2.82e-15 | 315 |
mesoderm-derived structure | 2.82e-15 | 315 |
presumptive mesoderm | 2.82e-15 | 315 |
connective tissue | 7.74e-12 | 371 |