FFCP PHASE1:Hg19::chr9:132536282..132536289,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:132536282..132536289,+ | |||
|coexpression_cluster_id=C2069 | |coexpression_cluster_id=C2069 | ||
|description=CAGE_peak_at_chr9:132536282..132536289,+ | |description=CAGE_peak_at_chr9:132536282..132536289,+ | ||
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|ontology_enrichment_celltype=CL:0002057!8.62e-52!42;CL:0000860!4.35e-48!45;CL:0002393!2.32e-45!9;CL:0002397!2.32e-45!9;CL:0000766!5.06e-44!76;CL:0002194!1.09e-32!63;CL:0000576!1.09e-32!63;CL:0000040!1.09e-32!63;CL:0000559!1.09e-32!63;CL:0002009!1.39e-31!65;CL:0000839!4.33e-29!70;CL:0000738!6.76e-29!140;CL:0000557!1.24e-28!71;CL:0000763!1.52e-28!112;CL:0000049!1.52e-28!112;CL:0000037!1.22e-22!172;CL:0000566!1.22e-22!172;CL:0002087!6.03e-22!119;CL:0000988!3.94e-21!182;CL:0000842!5.68e-21!3;CL:0000094!1.72e-20!8;CL:0002032!5.97e-18!165;CL:0000837!5.97e-18!165;CL:0000224!7.14e-16!4;CL:0002031!7.22e-15!124;CL:0000081!7.35e-15!11;CL:0000080!9.46e-11!6;CL:0000134!3.89e-10!358;CL:0000775!4.02e-10!3;CL:0002320!7.70e-10!365;CL:0000875!1.71e-09!3;CL:0002396!1.71e-09!3;CL:0000767!2.51e-09!3;CL:0000219!8.54e-09!390;CL:0000048!1.53e-07!430;CL:0000723!2.31e-07!436;CL:0000034!3.93e-07!444 | |ontology_enrichment_celltype=CL:0002057!8.62e-52!42;CL:0000860!4.35e-48!45;CL:0002393!2.32e-45!9;CL:0002397!2.32e-45!9;CL:0000766!5.06e-44!76;CL:0002194!1.09e-32!63;CL:0000576!1.09e-32!63;CL:0000040!1.09e-32!63;CL:0000559!1.09e-32!63;CL:0002009!1.39e-31!65;CL:0000839!4.33e-29!70;CL:0000738!6.76e-29!140;CL:0000557!1.24e-28!71;CL:0000763!1.52e-28!112;CL:0000049!1.52e-28!112;CL:0000037!1.22e-22!172;CL:0000566!1.22e-22!172;CL:0002087!6.03e-22!119;CL:0000988!3.94e-21!182;CL:0000842!5.68e-21!3;CL:0000094!1.72e-20!8;CL:0002032!5.97e-18!165;CL:0000837!5.97e-18!165;CL:0000224!7.14e-16!4;CL:0002031!7.22e-15!124;CL:0000081!7.35e-15!11;CL:0000080!9.46e-11!6;CL:0000134!3.89e-10!358;CL:0000775!4.02e-10!3;CL:0002320!7.70e-10!365;CL:0000875!1.71e-09!3;CL:0002396!1.71e-09!3;CL:0000767!2.51e-09!3;CL:0000219!8.54e-09!390;CL:0000048!1.53e-07!430;CL:0000723!2.31e-07!436;CL:0000034!3.93e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000226;9.98e-60;3!CL:0000842;9.98e-60;3!CL:0002393;2.92e-30;6!CL:0002397;2.92e-30;6!CL:0000775;1.30e-27;3!CL:0000094;5.13e-23;8!CL:0000081;6.02e-17;11!CL:0000771;3.52e-11;2!CL:0000766;1.54e-08;69 | |ontology_enrichment_celltype_v019=CL:0000226;9.98e-60;3!CL:0000842;9.98e-60;3!CL:0002393;2.92e-30;6!CL:0002397;2.92e-30;6!CL:0000775;1.30e-27;3!CL:0000094;5.13e-23;8!CL:0000081;6.02e-17;11!CL:0000771;3.52e-11;2!CL:0000766;1.54e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000226,1.83e-59,3;CL:0000842,1.83e-59,3;CL:0000775,1.39e-27,3;CL:0000094,5.13e-23,8;CL:0002393,1.73e-20,9;CL:0002397,1.73e-20,9;CL:0000081,6.02e-17,11;CL:0000738,4.83e-14,136;CL:0000766,4.08e-13,72;CL:0000037,2.70e-11,168;CL:0000771,3.35e-11,2;CL:0000988,1.07e-10,177;CL:0000763,1.07e-08,108;CL:0000049,1.07e-08,108;CL:0002087,3.99e-08,115;CL:0000860,6.36e-08,42;CL:0002057,6.36e-08,42;CL:0000473,5.74e-07,48;CL:0000234,5.74e-07,48 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.76e-26!102;UBERON:0003061!2.76e-26!102;UBERON:0002371!5.00e-25!80;UBERON:0002193!1.42e-23!112;UBERON:0001474!4.89e-23!86;UBERON:0004765!4.37e-19!101;UBERON:0001434!4.37e-19!101;UBERON:0002405!2.99e-18!115;UBERON:0003081!3.54e-10!216;UBERON:0002204!4.37e-10!167;UBERON:0002384!1.95e-09!375;UBERON:0001282!1.99e-07!1;UBERON:0009842!1.99e-07!1;UBERON:0003704!1.99e-07!1;UBERON:0001171!1.99e-07!1;UBERON:0001172!1.99e-07!1 | |ontology_enrichment_uberon=UBERON:0002390!2.76e-26!102;UBERON:0003061!2.76e-26!102;UBERON:0002371!5.00e-25!80;UBERON:0002193!1.42e-23!112;UBERON:0001474!4.89e-23!86;UBERON:0004765!4.37e-19!101;UBERON:0001434!4.37e-19!101;UBERON:0002405!2.99e-18!115;UBERON:0003081!3.54e-10!216;UBERON:0002204!4.37e-10!167;UBERON:0002384!1.95e-09!375;UBERON:0001282!1.99e-07!1;UBERON:0009842!1.99e-07!1;UBERON:0003704!1.99e-07!1;UBERON:0001171!1.99e-07!1;UBERON:0001172!1.99e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-12;15!UBERON:0000179;1.40e-12;15!UBERON:0000463;1.40e-12;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-12;15!UBERON:0000179;1.40e-12;15!UBERON:0000463;1.40e-12;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.58e-12,15;UBERON:0000179,1.58e-12,15;UBERON:0000463,1.58e-12,15;UBERON:0002390,1.42e-09,98;UBERON:0003061,1.42e-09,98;UBERON:0002193,1.14e-08,108 | |||
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|short_description=p@chr9:132536282..132536289,+ | |short_description=p@chr9:132536282..132536289,+ | ||
}} | }} |
Latest revision as of 23:28, 31 July 2015
Short description: | p@chr9:132536282..132536289, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:132536282..132536289, + |
Coexpression cluster: | C2069_CD14_Neutrophils_Peripheral_Eosinophils_Basophils_immature_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 1.83e-59 | 3 |
mononuclear cell | 1.83e-59 | 3 |
neutrophil | 1.39e-27 | 3 |
granulocyte | 5.13e-23 | 8 |
intermediate monocyte | 1.73e-20 | 9 |
CD14-positive, CD16-positive monocyte | 1.73e-20 | 9 |
blood cell | 6.02e-17 | 11 |
leukocyte | 4.83e-14 | 136 |
myeloid leukocyte | 4.08e-13 | 72 |
hematopoietic stem cell | 2.70e-11 | 168 |
eosinophil | 3.35e-11 | 2 |
hematopoietic cell | 1.07e-10 | 177 |
myeloid cell | 1.07e-08 | 108 |
common myeloid progenitor | 1.07e-08 | 108 |
nongranular leukocyte | 3.99e-08 | 115 |
classical monocyte | 6.36e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.36e-08 | 42 |
defensive cell | 5.74e-07 | 48 |
phagocyte | 5.74e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
blood | 1.58e-12 | 15 |
haemolymphatic fluid | 1.58e-12 | 15 |
organism substance | 1.58e-12 | 15 |
hematopoietic system | 1.42e-09 | 98 |
blood island | 1.42e-09 | 98 |
hemolymphoid system | 1.14e-08 | 108 |