FFCP PHASE1:Mm9::chr7:117308382..117308389,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=366 | |MCL_coexpression_id=366 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:117308382..117308389,- | |||
|description=CAGE_peak_at_chr7:117308382..117308389,- | |description=CAGE_peak_at_chr7:117308382..117308389,- | ||
|id=chr7:117308382..117308389,- | |id=chr7:117308382..117308389,- | ||
|ontology_enrichment_celltype=CL:0000063!1.87e-15!66;CL:0000988!3.74e-10!32;CL:0002032!3.74e-10!32;CL:0000037!3.74e-10!32;CL:0000566!3.74e-10!32;CL:0000837!3.74e-10!32;CL:0002320!4.57e-09!46;CL:0000134!4.57e-09!46;CL:0000144!1.16e-08!121;CL:0000012!1.16e-08!121;CL:0000548!8.80e-08!115;CL:0000004!8.80e-08!115;CL:0000255!8.80e-08!115;CL:0000034!3.33e-07!97;CL:0002371!3.39e-07!118;CL:0002563!3.91e-07!9;CL:0002251!3.91e-07!9;CL:0000066!5.19e-07!25 | |ontology_enrichment_celltype=CL:0000063!1.87e-15!66;CL:0000988!3.74e-10!32;CL:0002032!3.74e-10!32;CL:0000037!3.74e-10!32;CL:0000566!3.74e-10!32;CL:0000837!3.74e-10!32;CL:0002320!4.57e-09!46;CL:0000134!4.57e-09!46;CL:0000144!1.16e-08!121;CL:0000012!1.16e-08!121;CL:0000548!8.80e-08!115;CL:0000004!8.80e-08!115;CL:0000255!8.80e-08!115;CL:0000034!3.33e-07!97;CL:0002371!3.39e-07!118;CL:0002563!3.91e-07!9;CL:0002251!3.91e-07!9;CL:0000066!5.19e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,6.33e-13,3;CL:0000213,1.63e-10,1;CL:0002078,1.63e-10,1;CL:0000115,1.63e-10,1;CL:0002262,1.63e-10,1;CL:1000398,1.63e-10,1;CL:0002563,2.04e-09,9;CL:0002251,2.04e-09,9;CL:0000223,1.93e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.57e-09!46;UBERON:0000485!1.78e-08!11;UBERON:0003350!3.91e-07!9;UBERON:0004808!3.91e-07!9;UBERON:0001277!3.91e-07!9 | |ontology_enrichment_uberon=UBERON:0002384!4.57e-09!46;UBERON:0000485!1.78e-08!11;UBERON:0003350!3.91e-07!9;UBERON:0004808!3.91e-07!9;UBERON:0001277!3.91e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.63e-10,1;UBERON:0001281,1.63e-10,1;UBERON:0000353,1.63e-10,1;UBERON:0003497,1.63e-10,1;UBERON:0003909,1.63e-10,1;UBERON:0003928,1.63e-10,1;UBERON:0003835,1.63e-10,1;UBERON:0003513,1.63e-10,1;UBERON:0001280,1.63e-10,1;UBERON:0004647,1.63e-10,1;UBERON:0002294,1.63e-10,1;UBERON:0001173,1.63e-10,1;UBERON:0004912,1.63e-10,1;UBERON:0005171,1.63e-10,1;UBERON:0003350,2.04e-09,9;UBERON:0004808,2.04e-09,9;UBERON:0001277,2.04e-09,9;UBERON:0000485,8.28e-08,11 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0.90739263392049,1.00179145989269,0.839396359559449,0.233612640595526,0.129123323441576,0.563154888606667,0.936258105287974,0.171217968225505,0.398860794976682,0.171200729931206,0,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,0.0850432901510698,0.297872853602656,1.30599894569468,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0,0,3.81018404075779,0.61506478758457,0,3.17736781726402,0.997407872150954,2.04169356262369,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0.671130424230945,0.725362142011344,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0.599200221036809,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08715426273523,0,0.679971333707751,0,0,0,0,0,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0,0.760079596425296,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.599075622529601,1.19980546198682,0.635351135365324,0,0,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0.702213187313235,0.772043721344145,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0.631016438832513,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0,0,0,0.162886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,1.18984900995699,1.6794174278839,0.690999869022119,0,0,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0.320297694209588,0,0.454999239389536,0.90739263392049,1.00179145989269,0.839396359559449,0.233612640595526,0.129123323441576,0.563154888606667,0.936258105287974,0.171217968225505,0.398860794976682,0.171200729931206,0,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,0.0850432901510698,0.297872853602656,1.30599894569468,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0,0,3.81018404075779,0.61506478758457,0,3.17736781726402,0.997407872150954,2.04169356262369,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0.671130424230945,0.725362142011344,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0.599200221036809,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08715426273523,0,0.679971333707751,0,0,0,0,0,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0,0.760079596425296,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.599075622529601,1.19980546198682,0.635351135365324,0,0,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0.702213187313235,0.772043721344145,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0.631016438832513,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0,0,0,0.162886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,1.18984900995699,1.6794174278839,0.690999869022119,0,0,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr7:117308382..117308389,- | |short_description=p@chr7:117308382..117308389,- | ||
}} | }} |
Latest revision as of 01:03, 4 August 2015
Short description: | p@chr7:117308382..117308389, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:117308382..117308389, - |
Coexpression cluster: | MCL_coexpression_mm9:366 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 6.33e-13 | 3 |
lining cell | 1.63e-10 | 1 |
meso-epithelial cell | 1.63e-10 | 1 |
endothelial cell | 1.63e-10 | 1 |
endothelial cell of sinusoid | 1.63e-10 | 1 |
endothelial cell of hepatic sinusoid | 1.63e-10 | 1 |
intestinal epithelial cell | 2.04e-09 | 9 |
epithelial cell of alimentary canal | 2.04e-09 | 9 |
endodermal cell | 1.93e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.63e-10 | 1 |
hepatic sinusoid | 1.63e-10 | 1 |
parenchyma | 1.63e-10 | 1 |
abdomen blood vessel | 1.63e-10 | 1 |
sinusoid | 1.63e-10 | 1 |
digestive system duct | 1.63e-10 | 1 |
abdominal segment blood vessel | 1.63e-10 | 1 |
trunk blood vessel | 1.63e-10 | 1 |
liver parenchyma | 1.63e-10 | 1 |
liver lobule | 1.63e-10 | 1 |
biliary system | 1.63e-10 | 1 |
biliary tree | 1.63e-10 | 1 |
biliary bud | 1.63e-10 | 1 |
hepatic duct | 1.63e-10 | 1 |
epithelium of mucosa | 2.04e-09 | 9 |
gastrointestinal system epithelium | 2.04e-09 | 9 |
intestinal epithelium | 2.04e-09 | 9 |
simple columnar epithelium | 8.28e-08 | 11 |