FFCP PHASE1:Mm9::chr10:13686627..13686677,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:13686627..13686677,-
|short_description=p@chr10:13686627..13686677,-
|description=CAGE_peak_at_chr10:13686627..13686677,-
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:13686627..13686677,- | |||
|description=CAGE_peak_at_chr10:13686627..13686677,- | |||
|id=chr10:13686627..13686677,- | |||
|ontology_enrichment_celltype=CL:0000988!9.20e-12!32;CL:0002032!9.20e-12!32;CL:0000037!9.20e-12!32;CL:0000566!9.20e-12!32;CL:0000837!9.20e-12!32;CL:0000838!1.13e-09!12;CL:0002320!3.80e-09!46;CL:0000134!3.80e-09!46;CL:0000542!1.08e-08!13;CL:0000051!1.08e-08!13;CL:0000084!1.15e-08!11;CL:0000827!1.15e-08!11;CL:0000893!1.65e-08!6;CL:0002489!1.65e-08!6;CL:0000898!1.65e-08!6;CL:0000809!1.65e-08!6;CL:0000810!1.65e-08!6;CL:0000895!1.65e-08!6;CL:0000808!1.65e-08!6;CL:0000894!1.65e-08!6;CL:0000806!1.65e-08!6;CL:0000807!1.65e-08!6;CL:0000805!1.65e-08!6;CL:0002425!1.65e-08!6;CL:0002436!1.65e-08!6;CL:0002427!1.65e-08!6;CL:0002428!1.65e-08!6;CL:0002429!1.65e-08!6;CL:0002433!1.65e-08!6;CL:0002431!1.65e-08!6;CL:0002432!1.65e-08!6;CL:0000034!2.36e-08!97;CL:0002031!2.83e-08!25;CL:0000624!3.19e-08!8;CL:0000219!2.45e-07!54;CL:0000723!3.60e-07!91;CL:0000048!3.60e-07!91;CL:0000791!4.27e-07!9;CL:0000789!4.27e-07!9;CL:0002420!4.27e-07!9;CL:0002419!4.27e-07!9;CL:0000790!4.27e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.11e-33,8;CL:0000893,9.20e-33,6;CL:0002489,9.20e-33,6;CL:0000898,9.20e-33,6;CL:0000809,9.20e-33,6;CL:0000810,9.20e-33,6;CL:0000895,9.20e-33,6;CL:0000808,9.20e-33,6;CL:0000894,9.20e-33,6;CL:0000806,9.20e-33,6;CL:0000807,9.20e-33,6;CL:0000805,9.20e-33,6;CL:0002425,9.20e-33,6;CL:0002436,9.20e-33,6;CL:0002427,9.20e-33,6;CL:0002428,9.20e-33,6;CL:0002429,9.20e-33,6;CL:0002433,9.20e-33,6;CL:0002431,9.20e-33,6;CL:0002432,9.20e-33,6;CL:0000791,1.72e-29,9;CL:0000789,1.72e-29,9;CL:0002420,1.72e-29,9;CL:0002419,1.72e-29,9;CL:0000790,1.72e-29,9;CL:0000084,4.85e-24,11;CL:0000827,4.85e-24,11;CL:0000988,2.09e-23,32;CL:0002032,2.09e-23,32;CL:0000037,2.09e-23,32;CL:0000837,2.09e-23,32;CL:0000838,5.39e-22,12;CL:0000542,2.91e-20,13;CL:0000051,2.91e-20,13;CL:0002320,1.30e-18,46;CL:0000134,1.30e-18,46;CL:0000219,1.30e-15,54;CL:0000738,2.30e-15,17;CL:0002087,2.30e-15,17;CL:0000034,7.49e-13,97;CL:0002031,2.98e-10,25;CL:0000723,1.49e-08,91;CL:0000048,1.49e-08,91;CL:0000049,3.04e-07,19;CL:0000815,6.93e-07,1;CL:0000792,6.93e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.38e-09!45;UBERON:0003061!1.38e-09!45;UBERON:0002384!3.80e-09!46;UBERON:0002193!1.59e-08!48;UBERON:0004177!6.30e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.30e-18,46;UBERON:0002370,2.63e-08,23;UBERON:0000974,2.63e-08,23;UBERON:0004807,2.63e-08,23;UBERON:0005058,2.63e-08,23;UBERON:0003351,2.63e-08,23;UBERON:0009113,2.63e-08,23;UBERON:0003295,2.63e-08,23;UBERON:0009722,2.63e-08,23;UBERON:0005562,2.63e-08,23;UBERON:0007690,2.63e-08,23;UBERON:0006562,6.06e-08,24;UBERON:0003408,6.06e-08,24;UBERON:0001557,6.06e-08,24;UBERON:0001042,6.06e-08,24;UBERON:0008814,6.06e-08,24;UBERON:0009145,6.06e-08,24;UBERON:0000077,4.72e-07,35;UBERON:0000072,5.15e-07,27;UBERON:0002390,5.82e-07,45;UBERON:0003061,5.82e-07,45 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,2.06597317506522,11.2630977721333,7.95819389494778,1.19852577757853,1.67521533890206,1.36960583944965,1.39872643870396,0,0.202475267389826,0.699561878128147,0.946386496074713,0.548457734422955,0.84877930359606,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0.550640256485045,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,1.15945795480671,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,3.47463861067169,3.59941638596045,1.90605340609597,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,1.28673953557358,1.98914449576915,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0.430846795465598,0,0,0.566153061577665,0.404810701674894,0,0.395287777946524,0.642642632843614,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0.341741761595705,0,0,0.188368457004691,0.136694227721025,0,4.9293744698218,3.21888340344413,2.76399947608848,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0.632022241256357,0,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,2.06597317506522,11.2630977721333,7.95819389494778,1.19852577757853,1.67521533890206,1.36960583944965,1.39872643870396,0,0.202475267389826,0.699561878128147,0.946386496074713,0.548457734422955,0.84877930359606,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0.550640256485045,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,1.15945795480671,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,3.47463861067169,3.59941638596045,1.90605340609597,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,1.28673953557358,1.98914449576915,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0.430846795465598,0,0,0.566153061577665,0.404810701674894,0,0.395287777946524,0.642642632843614,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0.341741761595705,0,0,0.188368457004691,0.136694227721025,0,4.9293744698218,3.21888340344413,2.76399947608848,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0.632022241256357,0,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:13686627..13686677,- | |||
}} | }} |
Latest revision as of 04:03, 4 August 2015
Short description: | p@chr10:13686627..13686677, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:13686627..13686677, - |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.30e-18 | 46 |
thymus | 2.63e-08 | 23 |
neck | 2.63e-08 | 23 |
respiratory system epithelium | 2.63e-08 | 23 |
hemolymphoid system gland | 2.63e-08 | 23 |
pharyngeal epithelium | 2.63e-08 | 23 |
thymic region | 2.63e-08 | 23 |
pharyngeal gland | 2.63e-08 | 23 |
entire pharyngeal arch endoderm | 2.63e-08 | 23 |
thymus primordium | 2.63e-08 | 23 |
early pharyngeal endoderm | 2.63e-08 | 23 |
pharynx | 6.06e-08 | 24 |
gland of gut | 6.06e-08 | 24 |
upper respiratory tract | 6.06e-08 | 24 |
chordate pharynx | 6.06e-08 | 24 |
pharyngeal arch system | 6.06e-08 | 24 |
pharyngeal region of foregut | 6.06e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 4.72e-07 | 35 |
segment of respiratory tract | 5.15e-07 | 27 |
hematopoietic system | 5.82e-07 | 45 |
blood island | 5.82e-07 | 45 |