FFCP PHASE1:Mm9::chr19:53113331..53113339,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:53113331..53113339,+
|short_description=p@chr19:53113331..53113339,+
|description=CAGE_peak_at_chr19:53113331..53113339,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:53113331..53113339,+ | |||
|description=CAGE_peak_at_chr19:53113331..53113339,+ | |||
|id=chr19:53113331..53113339,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.08e-08!9;CL:0002251!2.08e-08!9;CL:0002076!5.22e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.50e-36,9;CL:0002251,4.50e-36,9;CL:0000066,7.91e-34,25;CL:0002076,4.98e-31,15;CL:0000223,2.47e-27,20;CL:0000239,2.47e-24,6;CL:0000677,2.47e-24,6;CL:0000584,2.47e-24,6;CL:0000075,8.67e-21,7;CL:0002250,2.87e-13,3;CL:0000682,2.12e-12,3;CL:0002321,4.21e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!2.08e-08!9;UBERON:0004808!2.08e-08!9;UBERON:0001277!2.08e-08!9;UBERON:0001242!4.14e-08!13;UBERON:0000060!4.14e-08!13;UBERON:0001262!4.14e-08!13;UBERON:0004786!4.14e-08!13;UBERON:0000485!1.21e-07!11;UBERON:0000344!3.46e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.50e-36,9;UBERON:0004808,4.50e-36,9;UBERON:0001277,4.50e-36,9;UBERON:0000485,2.86e-29,11;UBERON:0001242,1.48e-24,13;UBERON:0001262,1.48e-24,13;UBERON:0004786,1.48e-24,13;UBERON:0000344,4.27e-21,15;UBERON:0004923,1.65e-15,24;UBERON:0000160,1.81e-09,31;UBERON:0000055,2.47e-07,5;UBERON:0007500,2.47e-07,5;UBERON:0001981,2.47e-07,5;UBERON:0002049,2.47e-07,5;UBERON:0007798,2.47e-07,5;UBERON:0004537,2.47e-07,5;UBERON:0006965,2.47e-07,5;UBERON:0000490,9.98e-07,66 | |||
|phase1_expression=0,10.4692622291808,3.63999391511629,16.6355316218757,23.041203577532,4.19698179779725,5.13947809310157,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,4.01962374880514,3.87685796543167,1.939241094173,0.190023419456374,0.756090389279792,0.665191531965914,1.90509202037889,3.69038872550742,0,15.8868390863201,6.64938581433969,21.4377824075488,0,0.7813353445238,0.523523743973798,0,0,0,1.00717454380462,1.01376931219515,0.734187008646726,0.782391344348039,0,0,0.777719596297134,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0,0.131886287730194,0,0,0,1.12552522006336,0,0,0,0,0,0.226714680320357,13.0439019915755,0,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0.70667914902068,0.704217098883403,0,0,0,0.865964164044856,1.77351905832569,1.51657333504435,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0.510914110417183,0.11981512450592,0.599902730993408,0.127070227073065,0.299581278809645,0,0,0,0.511430914660661,0,0.162241263067758,0.509196819251581,0.248813941220186,0,0.420883711772948,0.260240885925407,0,0.360124259610698,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0,0.351902248327898,0,0,0,0,0,0,0.257347907114715,0,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0.264450566663544,0.426576501070468,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.610953983535943,0.387904974335251,0.420814919341911,0.252946148497029,0.147610147979602,0,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0.678980343100753,0.234690248288502,0,0.476087281772027,0.195133647857799,0,0,0.637819074629948,0.163863314715738,0,0.578596234326046,0,0,0,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0.94652465824877,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0,0,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0,0.302323556964751,0,1.18120757152309,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.517434735131018,0.643011105094777,0.886701168211368,0.356737635204141,0.329098041204242,0,1.64270195644597,0.847328283455281,0,0,0.161464426695906,0.422190474497091,0.119372344003136,0,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0.509935289981566,0.279902904647316,0.414599921413271,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.259229946583586,0.621339313086926,0.56369293868419,0.149516546043979,0,0,0.258319646955462,0,0,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.358855426437903,0.167884616364078,0,0.375364950902364,0.183151624267265,0,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0,0,0 | |phase1_expression=0,10.4692622291808,3.63999391511629,16.6355316218757,23.041203577532,4.19698179779725,5.13947809310157,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,4.01962374880514,3.87685796543167,1.939241094173,0.190023419456374,0.756090389279792,0.665191531965914,1.90509202037889,3.69038872550742,0,15.8868390863201,6.64938581433969,21.4377824075488,0,0.7813353445238,0.523523743973798,0,0,0,1.00717454380462,1.01376931219515,0.734187008646726,0.782391344348039,0,0,0.777719596297134,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0,0.131886287730194,0,0,0,1.12552522006336,0,0,0,0,0,0.226714680320357,13.0439019915755,0,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0.70667914902068,0.704217098883403,0,0,0,0.865964164044856,1.77351905832569,1.51657333504435,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0.510914110417183,0.11981512450592,0.599902730993408,0.127070227073065,0.299581278809645,0,0,0,0.511430914660661,0,0.162241263067758,0.509196819251581,0.248813941220186,0,0.420883711772948,0.260240885925407,0,0.360124259610698,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0,0.351902248327898,0,0,0,0,0,0,0.257347907114715,0,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0.264450566663544,0.426576501070468,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.610953983535943,0.387904974335251,0.420814919341911,0.252946148497029,0.147610147979602,0,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0.678980343100753,0.234690248288502,0,0.476087281772027,0.195133647857799,0,0,0.637819074629948,0.163863314715738,0,0.578596234326046,0,0,0,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0.94652465824877,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0,0,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0,0.302323556964751,0,1.18120757152309,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.517434735131018,0.643011105094777,0.886701168211368,0.356737635204141,0.329098041204242,0,1.64270195644597,0.847328283455281,0,0,0.161464426695906,0.422190474497091,0.119372344003136,0,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0.509935289981566,0.279902904647316,0.414599921413271,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.259229946583586,0.621339313086926,0.56369293868419,0.149516546043979,0,0,0.258319646955462,0,0,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.358855426437903,0.167884616364078,0,0.375364950902364,0.183151624267265,0,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0,0,0 | ||
|short_description=p@chr19:53113331..53113339,+ | |||
}} | }} |
Latest revision as of 07:33, 4 August 2015
Short description: | p@chr19:53113331..53113339, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:53113331..53113339, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.50e-36 | 9 |
epithelial cell of alimentary canal | 4.50e-36 | 9 |
epithelial cell | 7.91e-34 | 25 |
endo-epithelial cell | 4.98e-31 | 15 |
endodermal cell | 2.47e-27 | 20 |
brush border epithelial cell | 2.47e-24 | 6 |
gut absorptive cell | 2.47e-24 | 6 |
enterocyte | 2.47e-24 | 6 |
columnar/cuboidal epithelial cell | 8.67e-21 | 7 |
intestinal crypt stem cell | 2.87e-13 | 3 |
M cell of gut | 2.12e-12 | 3 |
embryonic cell | 4.21e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.50e-36 | 9 |
gastrointestinal system epithelium | 4.50e-36 | 9 |
intestinal epithelium | 4.50e-36 | 9 |
simple columnar epithelium | 2.86e-29 | 11 |
intestinal mucosa | 1.48e-24 | 13 |
wall of intestine | 1.48e-24 | 13 |
gastrointestinal system mucosa | 1.48e-24 | 13 |
mucosa | 4.27e-21 | 15 |
organ component layer | 1.65e-15 | 24 |
intestine | 1.81e-09 | 31 |
vessel | 2.47e-07 | 5 |
epithelial tube open at both ends | 2.47e-07 | 5 |
blood vessel | 2.47e-07 | 5 |
vasculature | 2.47e-07 | 5 |
vascular system | 2.47e-07 | 5 |
blood vasculature | 2.47e-07 | 5 |
vascular cord | 2.47e-07 | 5 |
unilaminar epithelium | 9.98e-07 | 66 |