FFCP PHASE1:Mm9::chr17:24836848..24836850,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:24836848..24836850,+ | |||
|description=CAGE_peak_at_chr17:24836848..24836850,+ | |description=CAGE_peak_at_chr17:24836848..24836850,+ | ||
|id=chr17:24836848..24836850,+ | |id=chr17:24836848..24836850,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.90e-20!9;CL:0002251!1.90e-20!9;CL:0000239!8.43e-15!6;CL:0000677!8.43e-15!6;CL:0000212!8.43e-15!6;CL:0000584!8.43e-15!6;CL:0000075!1.45e-12!7;CL:0002076!1.59e-11!15;CL:0000066!2.20e-11!25;CL:0000223!3.44e-08!20;CL:0000473!7.73e-08!3;CL:0000627!7.73e-08!3;CL:0000682!7.73e-08!3;CL:0002250!3.08e-07!3 | |ontology_enrichment_celltype=CL:0002563!1.90e-20!9;CL:0002251!1.90e-20!9;CL:0000239!8.43e-15!6;CL:0000677!8.43e-15!6;CL:0000212!8.43e-15!6;CL:0000584!8.43e-15!6;CL:0000075!1.45e-12!7;CL:0002076!1.59e-11!15;CL:0000066!2.20e-11!25;CL:0000223!3.44e-08!20;CL:0000473!7.73e-08!3;CL:0000627!7.73e-08!3;CL:0000682!7.73e-08!3;CL:0002250!3.08e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.08e-23,9;CL:0002251,6.08e-23,9;CL:0000239,9.40e-19,6;CL:0000677,9.40e-19,6;CL:0000584,9.40e-19,6;CL:0000075,4.72e-16,7;CL:0000066,1.27e-15,25;CL:0002076,1.81e-13,15;CL:0000682,4.65e-13,3;CL:0000223,6.65e-10,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.27e-32!15;UBERON:0000160!1.87e-31!43;UBERON:0001242!1.73e-28!13;UBERON:0000060!1.73e-28!13;UBERON:0001262!1.73e-28!13;UBERON:0004786!1.73e-28!13;UBERON:0005409!5.66e-23!59;UBERON:0003350!1.90e-20!9;UBERON:0004808!1.90e-20!9;UBERON:0001277!1.90e-20!9;UBERON:0004923!5.57e-19!24;UBERON:0000485!2.17e-16!11;UBERON:0001007!8.16e-09!128;UBERON:0001555!8.16e-09!128;UBERON:0007026!8.16e-09!128;UBERON:0004119!1.42e-08!130;UBERON:0000925!1.42e-08!130;UBERON:0006595!1.42e-08!130;UBERON:0000331!9.53e-08!3;UBERON:0002116!9.53e-08!3;UBERON:0001204!9.53e-08!3;UBERON:0001168!9.53e-08!3;UBERON:0004921!2.48e-07!126;UBERON:0004185!2.48e-07!126 | |ontology_enrichment_uberon=UBERON:0000344!1.27e-32!15;UBERON:0000160!1.87e-31!43;UBERON:0001242!1.73e-28!13;UBERON:0000060!1.73e-28!13;UBERON:0001262!1.73e-28!13;UBERON:0004786!1.73e-28!13;UBERON:0005409!5.66e-23!59;UBERON:0003350!1.90e-20!9;UBERON:0004808!1.90e-20!9;UBERON:0001277!1.90e-20!9;UBERON:0004923!5.57e-19!24;UBERON:0000485!2.17e-16!11;UBERON:0001007!8.16e-09!128;UBERON:0001555!8.16e-09!128;UBERON:0007026!8.16e-09!128;UBERON:0004119!1.42e-08!130;UBERON:0000925!1.42e-08!130;UBERON:0006595!1.42e-08!130;UBERON:0000331!9.53e-08!3;UBERON:0002116!9.53e-08!3;UBERON:0001204!9.53e-08!3;UBERON:0001168!9.53e-08!3;UBERON:0004921!2.48e-07!126;UBERON:0004185!2.48e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.73e-37,31;UBERON:0000344,1.96e-27,15;UBERON:0001242,8.19e-26,13;UBERON:0001262,8.19e-26,13;UBERON:0004786,8.19e-26,13;UBERON:0005409,1.09e-23,47;UBERON:0003350,6.08e-23,9;UBERON:0004808,6.08e-23,9;UBERON:0001277,6.08e-23,9;UBERON:0000485,1.22e-18,11;UBERON:0004923,1.41e-16,24;UBERON:0002108,4.11e-10,4;UBERON:0001007,4.02e-09,116;UBERON:0001555,4.02e-09,116;UBERON:0007026,4.02e-09,116;UBERON:0004119,6.46e-09,118;UBERON:0000925,6.46e-09,118;UBERON:0006595,6.46e-09,118;UBERON:0004921,4.27e-08,114 | |||
|phase1_expression=0,3.48975407639361,3.63999391511629,3.93203474698879,2.50447864973174,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,0.68822784320151,1.14846392823004,2.58457197695445,1.29282739611533,1.52018735565099,2.52030129759931,0.665191531965914,0,0,0,1.1554064790051,1.16364251750945,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.793351699990633,0,0,0,0,0.667134131534611,2.47293313946327,0.474529061544512,3.29397909448022,1.75934646160189,1.39269530428806,0.974820435595601,0,1.29682829924817,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.48975407639361,3.63999391511629,3.93203474698879,2.50447864973174,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,0.68822784320151,1.14846392823004,2.58457197695445,1.29282739611533,1.52018735565099,2.52030129759931,0.665191531965914,0,0,0,1.1554064790051,1.16364251750945,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.793351699990633,0,0,0,0,0.667134131534611,2.47293313946327,0.474529061544512,3.29397909448022,1.75934646160189,1.39269530428806,0.974820435595601,0,1.29682829924817,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:24836848..24836850,+ | |short_description=p@chr17:24836848..24836850,+ | ||
}} | }} |
Latest revision as of 10:29, 4 August 2015
Short description: | p@chr17:24836848..24836850, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:24836848..24836850, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.08e-23 | 9 |
epithelial cell of alimentary canal | 6.08e-23 | 9 |
brush border epithelial cell | 9.40e-19 | 6 |
gut absorptive cell | 9.40e-19 | 6 |
enterocyte | 9.40e-19 | 6 |
columnar/cuboidal epithelial cell | 4.72e-16 | 7 |
epithelial cell | 1.27e-15 | 25 |
endo-epithelial cell | 1.81e-13 | 15 |
M cell of gut | 4.65e-13 | 3 |
endodermal cell | 6.65e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.73e-37 | 31 |
mucosa | 1.96e-27 | 15 |
intestinal mucosa | 8.19e-26 | 13 |
wall of intestine | 8.19e-26 | 13 |
gastrointestinal system mucosa | 8.19e-26 | 13 |
gastrointestinal system | 1.09e-23 | 47 |
epithelium of mucosa | 6.08e-23 | 9 |
gastrointestinal system epithelium | 6.08e-23 | 9 |
intestinal epithelium | 6.08e-23 | 9 |
simple columnar epithelium | 1.22e-18 | 11 |
organ component layer | 1.41e-16 | 24 |
small intestine | 4.11e-10 | 4 |
digestive system | 4.02e-09 | 116 |
digestive tract | 4.02e-09 | 116 |
primitive gut | 4.02e-09 | 116 |
endoderm-derived structure | 6.46e-09 | 118 |
endoderm | 6.46e-09 | 118 |
presumptive endoderm | 6.46e-09 | 118 |
subdivision of digestive tract | 4.27e-08 | 114 |