FFCP PHASE1:Mm9::chr1:132783985..132783998,-: Difference between revisions
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{{FFCP|EntrezGene=93672|HGNC=|MCL_coexpression_id=1579|UniProt=E9PW96,Q925S4|association_with_transcript=0bp_to_ENSMUST00000164265,NM_053095,uc007cmq.2,uc011wrl.1_5end|description=CAGE_peak_1_at_Il24_5end|id=chr1:132783985..132783998,-|ontology_enrichment_celltype=CL:0000068!6.29e-14!3;CL:0002202!6.29e-14!3;CL:0000069!6.29e-14!3;CL:0002632!6.29e-14!3;CL:0002368!6.29e-14!3;CL:0000307!6.29e-14!3;CL:0000377!6.29e-14!3;CL:0000349!8.61e-07!3;CL:0000351!8.61e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,3.27e-44,3;CL:0002202,3.27e-44,3;CL:0000069,3.27e-44,3;CL:0002632,3.27e-44,3;CL:0002368,3.27e-44,3;CL:0000307,3.27e-44,3;CL:0000377,3.27e-44,3;CL:0000349,2.49e-20,3;CL:0000351,2.49e-20,3;CL:0002076,1.62e-09,15;CL:0000223,2.62e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000072!2.96e-16!27;UBERON:0003126!6.29e-14!3;UBERON:0001005!6.29e-14!3;UBERON:0007196!6.29e-14!3;UBERON:0001558!6.29e-14!3;UBERON:0003975!1.11e-13!5;UBERON:0000063!3.96e-12!35;UBERON:0000065!4.35e-10!41;UBERON:0005795!5.23e-10!4;UBERON:0000995!5.23e-10!4;UBERON:0001004!8.35e-10!42;UBERON:0002370!8.72e-10!23;UBERON:0000974!8.72e-10!23;UBERON:0004807!8.72e-10!23;UBERON:0005058!8.72e-10!23;UBERON:0003351!8.72e-10!23;UBERON:0009113!8.72e-10!23;UBERON:0003295!8.72e-10!23;UBERON:0009722!8.72e-10!23;UBERON:0005562!8.72e-10!23;UBERON:0007690!8.72e-10!23;UBERON:0006562!2.46e-09!24;UBERON:0003408!2.46e-09!24;UBERON:0001557!2.46e-09!24;UBERON:0001042!2.46e-09!24;UBERON:0008814!2.46e-09!24;UBERON:0009145!2.46e-09!24;UBERON:0003134!1.35e-08!8;UBERON:0004175!1.19e-07!9;UBERON:0000474!1.19e-07!9;UBERON:0004177!1.51e-07!29;UBERON:0000358!8.61e-07!3;UBERON:0000307!8.61e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.27e-44,3;UBERON:0001005,3.27e-44,3;UBERON:0007196,3.27e-44,3;UBERON:0001558,3.27e-44,3;UBERON:0000358,2.49e-20,3;UBERON:0000307,2.49e-20,3;UBERON:0007010,2.49e-20,3;UBERON:0005178,1.76e-08,17;UBERON:0005181,1.76e-08,17;UBERON:0002224,1.76e-08,17;UBERON:0000915,1.76e-08,17;UBERON:0008947,1.76e-08,17;UBERON:0003258,1.76e-08,17;UBERON:0001987,1.81e-08,2;UBERON:0003124,1.81e-08,2;UBERON:0004340,1.81e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9894624606728,11.1478340809043,8.59391556525132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58138878870081,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0.381034033274999,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,22.24903643915,1.84673078000486,0,0.93841237725591,0.183151624267265,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p1@Il24}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:93672 | |||
|HGNC= | |||
|MCL_coexpression_id=1579 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PW96,uniprot:Q925S4 | |||
|association_with_transcript=0bp_to_ENSMUST00000164265,NM_053095,uc007cmq.2,uc011wrl.1_5end | |||
|cluster_id=chr1:132783985..132783998,- | |||
|description=CAGE_peak_1_at_Il24_5end | |||
|id=chr1:132783985..132783998,- | |||
|ontology_enrichment_celltype=CL:0000068!6.29e-14!3;CL:0002202!6.29e-14!3;CL:0000069!6.29e-14!3;CL:0002632!6.29e-14!3;CL:0002368!6.29e-14!3;CL:0000307!6.29e-14!3;CL:0000377!6.29e-14!3;CL:0000349!8.61e-07!3;CL:0000351!8.61e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.27e-44,3;CL:0002202,3.27e-44,3;CL:0000069,3.27e-44,3;CL:0002632,3.27e-44,3;CL:0002368,3.27e-44,3;CL:0000307,3.27e-44,3;CL:0000377,3.27e-44,3;CL:0000349,2.49e-20,3;CL:0000351,2.49e-20,3;CL:0002076,1.62e-09,15;CL:0000223,2.62e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!2.96e-16!27;UBERON:0003126!6.29e-14!3;UBERON:0001005!6.29e-14!3;UBERON:0007196!6.29e-14!3;UBERON:0001558!6.29e-14!3;UBERON:0003975!1.11e-13!5;UBERON:0000063!3.96e-12!35;UBERON:0000065!4.35e-10!41;UBERON:0005795!5.23e-10!4;UBERON:0000995!5.23e-10!4;UBERON:0001004!8.35e-10!42;UBERON:0002370!8.72e-10!23;UBERON:0000974!8.72e-10!23;UBERON:0004807!8.72e-10!23;UBERON:0005058!8.72e-10!23;UBERON:0003351!8.72e-10!23;UBERON:0009113!8.72e-10!23;UBERON:0003295!8.72e-10!23;UBERON:0009722!8.72e-10!23;UBERON:0005562!8.72e-10!23;UBERON:0007690!8.72e-10!23;UBERON:0006562!2.46e-09!24;UBERON:0003408!2.46e-09!24;UBERON:0001557!2.46e-09!24;UBERON:0001042!2.46e-09!24;UBERON:0008814!2.46e-09!24;UBERON:0009145!2.46e-09!24;UBERON:0003134!1.35e-08!8;UBERON:0004175!1.19e-07!9;UBERON:0000474!1.19e-07!9;UBERON:0004177!1.51e-07!29;UBERON:0000358!8.61e-07!3;UBERON:0000307!8.61e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.27e-44,3;UBERON:0001005,3.27e-44,3;UBERON:0007196,3.27e-44,3;UBERON:0001558,3.27e-44,3;UBERON:0000358,2.49e-20,3;UBERON:0000307,2.49e-20,3;UBERON:0007010,2.49e-20,3;UBERON:0005178,1.76e-08,17;UBERON:0005181,1.76e-08,17;UBERON:0002224,1.76e-08,17;UBERON:0000915,1.76e-08,17;UBERON:0008947,1.76e-08,17;UBERON:0003258,1.76e-08,17;UBERON:0001987,1.81e-08,2;UBERON:0003124,1.81e-08,2;UBERON:0004340,1.81e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9894624606728,11.1478340809043,8.59391556525132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58138878870081,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0.381034033274999,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,22.24903643915,1.84673078000486,0,0.93841237725591,0.183151624267265,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p1@Il24 | |||
}} |
Revision as of 18:01, 4 August 2015
Short description: | p1@Il24 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Il24_5end |
Coexpression cluster: | MCL_coexpression_mm9:1579 |
Association with transcript: | 0bp_to_ENSMUST00000164265, NM_053095, uc007cmq.2, uc011wrl.1_5end |
EntrezGene: | 93672 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.27e-44 | 3 |
epithelial cell of tracheobronchial tree | 3.27e-44 | 3 |
branched duct epithelial cell | 3.27e-44 | 3 |
epithelial cell of lower respiratory tract | 3.27e-44 | 3 |
respiratory epithelial cell | 3.27e-44 | 3 |
tracheal epithelial cell | 3.27e-44 | 3 |
tracheoblast | 3.27e-44 | 3 |
extraembryonic cell | 2.49e-20 | 3 |
trophoblast cell | 2.49e-20 | 3 |
endo-epithelial cell | 1.62e-09 | 15 |
endodermal cell | 2.62e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.27e-44 | 3 |
respiratory airway | 3.27e-44 | 3 |
tracheobronchial tree | 3.27e-44 | 3 |
lower respiratory tract | 3.27e-44 | 3 |
blastocyst | 2.49e-20 | 3 |
blastula | 2.49e-20 | 3 |
cleaving embryo | 2.49e-20 | 3 |
thoracic cavity element | 1.76e-08 | 17 |
thoracic segment organ | 1.76e-08 | 17 |
thoracic cavity | 1.76e-08 | 17 |
thoracic segment of trunk | 1.76e-08 | 17 |
respiratory primordium | 1.76e-08 | 17 |
endoderm of foregut | 1.76e-08 | 17 |
placenta | 1.81e-08 | 2 |
chorion | 1.81e-08 | 2 |
allantois | 1.81e-08 | 2 |