FFCP PHASE1:Mm9::chr14:73507116..73507118,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:73507116..73507118,+ | |||
|description=CAGE_peak_at_chr14:73507116..73507118,+ | |description=CAGE_peak_at_chr14:73507116..73507118,+ | ||
|id=chr14:73507116..73507118,+ | |id=chr14:73507116..73507118,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.90e-22!9;CL:0002251!3.90e-22!9;CL:0000239!1.90e-15!6;CL:0000677!1.90e-15!6;CL:0000212!1.90e-15!6;CL:0000584!1.90e-15!6;CL:0000075!4.05e-13!7;CL:0002076!1.65e-12!15;CL:0000066!2.50e-12!25;CL:0000223!6.55e-09!20;CL:0002250!2.94e-08!3;CL:0000473!3.46e-08!3;CL:0000627!3.46e-08!3;CL:0000682!3.46e-08!3 | |ontology_enrichment_celltype=CL:0002563!3.90e-22!9;CL:0002251!3.90e-22!9;CL:0000239!1.90e-15!6;CL:0000677!1.90e-15!6;CL:0000212!1.90e-15!6;CL:0000584!1.90e-15!6;CL:0000075!4.05e-13!7;CL:0002076!1.65e-12!15;CL:0000066!2.50e-12!25;CL:0000223!6.55e-09!20;CL:0002250!2.94e-08!3;CL:0000473!3.46e-08!3;CL:0000627!3.46e-08!3;CL:0000682!3.46e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.11e-44,9;CL:0002251,7.11e-44,9;CL:0000239,1.22e-29,6;CL:0000677,1.22e-29,6;CL:0000584,1.22e-29,6;CL:0000066,6.66e-28,25;CL:0002076,1.86e-26,15;CL:0000075,1.71e-25,7;CL:0000223,6.68e-20,20;CL:0002250,1.04e-15,3;CL:0000682,2.85e-15,3;CL:0000473,4.35e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.21e-30!15;UBERON:0001242!1.21e-25!13;UBERON:0000060!1.21e-25!13;UBERON:0001262!1.21e-25!13;UBERON:0004786!1.21e-25!13;UBERON:0003350!3.90e-22!9;UBERON:0004808!3.90e-22!9;UBERON:0001277!3.90e-22!9;UBERON:0000160!3.78e-18!43;UBERON:0000485!9.30e-18!11;UBERON:0005409!1.15e-17!59;UBERON:0004923!2.30e-17!24;UBERON:0001007!8.15e-10!128;UBERON:0001555!8.15e-10!128;UBERON:0007026!8.15e-10!128;UBERON:0004119!1.47e-09!130;UBERON:0000925!1.47e-09!130;UBERON:0006595!1.47e-09!130;UBERON:0004921!3.25e-08!126;UBERON:0004185!3.25e-08!126;UBERON:0000331!2.09e-07!3;UBERON:0002116!2.09e-07!3;UBERON:0001204!2.09e-07!3;UBERON:0001168!2.09e-07!3 | |ontology_enrichment_uberon=UBERON:0000344!7.21e-30!15;UBERON:0001242!1.21e-25!13;UBERON:0000060!1.21e-25!13;UBERON:0001262!1.21e-25!13;UBERON:0004786!1.21e-25!13;UBERON:0003350!3.90e-22!9;UBERON:0004808!3.90e-22!9;UBERON:0001277!3.90e-22!9;UBERON:0000160!3.78e-18!43;UBERON:0000485!9.30e-18!11;UBERON:0005409!1.15e-17!59;UBERON:0004923!2.30e-17!24;UBERON:0001007!8.15e-10!128;UBERON:0001555!8.15e-10!128;UBERON:0007026!8.15e-10!128;UBERON:0004119!1.47e-09!130;UBERON:0000925!1.47e-09!130;UBERON:0006595!1.47e-09!130;UBERON:0004921!3.25e-08!126;UBERON:0004185!3.25e-08!126;UBERON:0000331!2.09e-07!3;UBERON:0002116!2.09e-07!3;UBERON:0001204!2.09e-07!3;UBERON:0001168!2.09e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.11e-44,9;UBERON:0004808,7.11e-44,9;UBERON:0001277,7.11e-44,9;UBERON:0000485,5.78e-36,11;UBERON:0001242,1.76e-30,13;UBERON:0001262,1.76e-30,13;UBERON:0004786,1.76e-30,13;UBERON:0000344,1.86e-26,15;UBERON:0004923,1.29e-16,24;UBERON:0000160,6.80e-13,31;UBERON:0005409,1.61e-08,47;UBERON:0003929,2.81e-07,55 | |||
|phase1_expression=0,1.04692622291808,1.81999695755814,4.83942738090928,7.01254021924886,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.91763712426868,1.14846392823004,0.430761996159075,1.29282739611533,0.570070258369122,0.504060259519861,0.221730510655305,0,0,0,2.02196133825892,0.332469290716985,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0.232236671860439,0,0,0.667134131534611,0.380451252225118,0,0,0,0.596869416123452,0,0,0.864552199498777,0,0,0,0,0,0,0,0,0,0,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,1.04692622291808,1.81999695755814,4.83942738090928,7.01254021924886,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.91763712426868,1.14846392823004,0.430761996159075,1.29282739611533,0.570070258369122,0.504060259519861,0.221730510655305,0,0,0,2.02196133825892,0.332469290716985,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0.232236671860439,0,0,0.667134131534611,0.380451252225118,0,0,0,0.596869416123452,0,0,0.864552199498777,0,0,0,0,0,0,0,0,0,0,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr14:73507116..73507118,+ | |short_description=p@chr14:73507116..73507118,+ | ||
}} | }} |
Latest revision as of 19:01, 4 August 2015
Short description: | p@chr14:73507116..73507118, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:73507116..73507118, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.11e-44 | 9 |
epithelial cell of alimentary canal | 7.11e-44 | 9 |
brush border epithelial cell | 1.22e-29 | 6 |
gut absorptive cell | 1.22e-29 | 6 |
enterocyte | 1.22e-29 | 6 |
epithelial cell | 6.66e-28 | 25 |
endo-epithelial cell | 1.86e-26 | 15 |
columnar/cuboidal epithelial cell | 1.71e-25 | 7 |
endodermal cell | 6.68e-20 | 20 |
intestinal crypt stem cell | 1.04e-15 | 3 |
M cell of gut | 2.85e-15 | 3 |
defensive cell | 4.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 7.11e-44 | 9 |
gastrointestinal system epithelium | 7.11e-44 | 9 |
intestinal epithelium | 7.11e-44 | 9 |
simple columnar epithelium | 5.78e-36 | 11 |
intestinal mucosa | 1.76e-30 | 13 |
wall of intestine | 1.76e-30 | 13 |
gastrointestinal system mucosa | 1.76e-30 | 13 |
mucosa | 1.86e-26 | 15 |
organ component layer | 1.29e-16 | 24 |
intestine | 6.80e-13 | 31 |
gastrointestinal system | 1.61e-08 | 47 |
gut epithelium | 2.81e-07 | 55 |