FFCP PHASE1:Mm9::chr6:113145374..113145381,-: Difference between revisions
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{{FFCP|EntrezGene=269788|HGNC=|MCL_coexpression_id=1|UniProt=Q5U4E0|association_with_transcript=0bp_to_ENSMUST00000060787,ENSMUST00000162280,NM_177763,uc009dev.1_5end|description=CAGE_peak_2_at_Lhfpl4_5end|id=chr6:113145374..113145381,-|ontology_enrichment_celltype=CL:0000117!3.25e-22!23;CL:0000337!3.25e-22!23;CL:0000540!3.81e-14!33;CL:0000047!3.81e-14!33;CL:0000031!3.81e-14!33;CL:0000404!3.81e-14!33;CL:0002319!8.50e-11!43;CL:0000393!9.07e-11!39;CL:0000211!9.07e-11!39;CL:0000221!2.27e-10!44;CL:0000133!2.27e-10!44;CL:0000055!3.39e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-25,23;CL:0000337,1.08e-25,23;CL:0000540,4.82e-17,33;CL:0000047,4.82e-17,33;CL:0000031,4.82e-17,33;CL:0000404,4.82e-17,33;CL:0000393,5.56e-14,39;CL:0000211,5.56e-14,39;CL:0002319,2.04e-12,43;CL:0000221,4.54e-12,44;CL:0000133,4.54e-12,44;CL:0002610,3.07e-11,3;CL:0002614,2.34e-10,3;CL:0002613,3.63e-10,3;CL:0002611,5.02e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.88e-34!52;UBERON:0005068!1.88e-34!52;UBERON:0006241!1.88e-34!52;UBERON:0007135!1.88e-34!52;UBERON:0000955!7.48e-32!50;UBERON:0006238!7.48e-32!50;UBERON:0001017!1.06e-31!73;UBERON:0005743!1.06e-31!73;UBERON:0000073!1.60e-31!75;UBERON:0001016!1.60e-31!75;UBERON:0002616!4.21e-31!49;UBERON:0000033!1.64e-30!63;UBERON:0002020!3.84e-30!34;UBERON:0002346!4.23e-30!71;UBERON:0003075!4.23e-30!71;UBERON:0007284!4.23e-30!71;UBERON:0004121!7.79e-26!102;UBERON:0000924!7.79e-26!102;UBERON:0006601!7.79e-26!102;UBERON:0003056!8.67e-26!49;UBERON:0003080!1.80e-25!40;UBERON:0002780!1.87e-24!39;UBERON:0001890!1.87e-24!39;UBERON:0006240!1.87e-24!39;UBERON:0002791!2.88e-24!29;UBERON:0003528!2.88e-24!29;UBERON:0001893!2.88e-24!29;UBERON:0007811!7.02e-20!86;UBERON:0000153!9.52e-18!94;UBERON:0000956!9.62e-16!21;UBERON:0001869!9.62e-16!21;UBERON:0000203!9.62e-16!21;UBERON:0002619!1.79e-12!17;UBERON:0002021!2.69e-10!10;UBERON:0000411!2.69e-10!10;UBERON:0001950!2.69e-10!10;UBERON:0002420!8.20e-10!8;UBERON:0007245!8.20e-10!8;UBERON:0010009!8.20e-10!8;UBERON:0010011!8.20e-10!8;UBERON:0000454!8.20e-10!8;UBERON:0003076!3.91e-09!12;UBERON:0003057!3.91e-09!12;UBERON:0002240!4.17e-08!6;UBERON:0005174!4.17e-08!6;UBERON:0001137!4.17e-08!6;UBERON:0000025!6.08e-08!114;UBERON:0002298!8.59e-08!6;UBERON:0004111!1.48e-07!122;UBERON:0001948!4.66e-07!5;UBERON:0002315!4.66e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.80e-36,54;UBERON:0001049,1.92e-31,52;UBERON:0005068,1.92e-31,52;UBERON:0006241,1.92e-31,52;UBERON:0007135,1.92e-31,52;UBERON:0001017,2.05e-30,73;UBERON:0001016,1.76e-29,75;UBERON:0002020,2.29e-27,34;UBERON:0002346,1.03e-24,64;UBERON:0003075,1.03e-24,64;UBERON:0007284,1.03e-24,64;UBERON:0002420,3.92e-24,8;UBERON:0007245,3.92e-24,8;UBERON:0010009,3.92e-24,8;UBERON:0010011,3.92e-24,8;UBERON:0000454,3.92e-24,8;UBERON:0004121,2.70e-22,95;UBERON:0000924,2.70e-22,95;UBERON:0006601,2.70e-22,95;UBERON:0002616,3.52e-21,46;UBERON:0010371,4.07e-21,73;UBERON:0000955,1.19e-20,47;UBERON:0006238,1.19e-20,47;UBERON:0003080,1.47e-19,40;UBERON:0003528,1.01e-18,29;UBERON:0002791,1.01e-18,29;UBERON:0001893,1.01e-18,29;UBERON:0002780,9.54e-18,39;UBERON:0001890,9.54e-18,39;UBERON:0006240,9.54e-18,39;UBERON:0010314,8.05e-16,92;UBERON:0000369,2.26e-15,5;UBERON:0002435,2.26e-15,5;UBERON:0000204,2.26e-15,5;UBERON:0010082,2.26e-15,5;UBERON:0003056,2.45e-15,49;UBERON:0002240,3.59e-14,6;UBERON:0005174,3.59e-14,6;UBERON:0001137,3.59e-14,6;UBERON:0002950,5.90e-13,4;UBERON:0001891,5.90e-13,4;UBERON:0009616,5.90e-13,4;UBERON:0010286,5.90e-13,4;UBERON:0003076,7.18e-13,12;UBERON:0003057,7.18e-13,12;UBERON:0000025,7.00e-12,114;UBERON:0001948,2.21e-11,5;UBERON:0002315,2.21e-11,5;UBERON:0004684,3.07e-11,3;UBERON:0002275,3.07e-11,3;UBERON:0004111,8.47e-11,122;UBERON:0002038,2.34e-10,3;UBERON:0009663,2.34e-10,3;UBERON:0009661,2.34e-10,3;UBERON:0000125,2.34e-10,3;UBERON:0002308,2.34e-10,3;UBERON:0011216,1.97e-08,194;UBERON:0002256,5.02e-08,2;UBERON:0001896,2.83e-07,2;UBERON:0002298,2.83e-07,2;UBERON:0005290,2.83e-07,2;UBERON:0010096,2.83e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.270011876663381,0.630974884054146,2.57085885963423,2.65042249141936,0.979926393719632,0.575072826109418,0.919218786610021,2.20231761998777,3.31987079021488,3.07213066512487,1.84640802822271,2.01272815925301,1.56274011167028,1.67509799400829,3.93933827022176,1.5279824777681,2.06240009831567,2.56269025438385,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,1.49790639404823,1.37250180845588,1.50785222535437,1.91206752211504,0.767146371990992,1.87009240103604,1.94689515681309,0,0,0,0,0,0.229902104433473,0,0,0.340182495756639,0.896796041993948,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.823236899034275,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,0.460325236507177,3.43737308063638,1.89038500578056,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.367687016900028,0,0,0,0,0,0,0.37456602987953,0.512201219238954,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.282328141245992,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0.463735671240843|short_description=p2@Lhfpl4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269788 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5U4E0 | |||
|association_with_transcript=0bp_to_ENSMUST00000060787,ENSMUST00000162280,NM_177763,uc009dev.1_5end | |||
|cluster_id=chr6:113145374..113145381,- | |||
|description=CAGE_peak_2_at_Lhfpl4_5end | |||
|id=chr6:113145374..113145381,- | |||
|ontology_enrichment_celltype=CL:0000117!3.25e-22!23;CL:0000337!3.25e-22!23;CL:0000540!3.81e-14!33;CL:0000047!3.81e-14!33;CL:0000031!3.81e-14!33;CL:0000404!3.81e-14!33;CL:0002319!8.50e-11!43;CL:0000393!9.07e-11!39;CL:0000211!9.07e-11!39;CL:0000221!2.27e-10!44;CL:0000133!2.27e-10!44;CL:0000055!3.39e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-25,23;CL:0000337,1.08e-25,23;CL:0000540,4.82e-17,33;CL:0000047,4.82e-17,33;CL:0000031,4.82e-17,33;CL:0000404,4.82e-17,33;CL:0000393,5.56e-14,39;CL:0000211,5.56e-14,39;CL:0002319,2.04e-12,43;CL:0000221,4.54e-12,44;CL:0000133,4.54e-12,44;CL:0002610,3.07e-11,3;CL:0002614,2.34e-10,3;CL:0002613,3.63e-10,3;CL:0002611,5.02e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.88e-34!52;UBERON:0005068!1.88e-34!52;UBERON:0006241!1.88e-34!52;UBERON:0007135!1.88e-34!52;UBERON:0000955!7.48e-32!50;UBERON:0006238!7.48e-32!50;UBERON:0001017!1.06e-31!73;UBERON:0005743!1.06e-31!73;UBERON:0000073!1.60e-31!75;UBERON:0001016!1.60e-31!75;UBERON:0002616!4.21e-31!49;UBERON:0000033!1.64e-30!63;UBERON:0002020!3.84e-30!34;UBERON:0002346!4.23e-30!71;UBERON:0003075!4.23e-30!71;UBERON:0007284!4.23e-30!71;UBERON:0004121!7.79e-26!102;UBERON:0000924!7.79e-26!102;UBERON:0006601!7.79e-26!102;UBERON:0003056!8.67e-26!49;UBERON:0003080!1.80e-25!40;UBERON:0002780!1.87e-24!39;UBERON:0001890!1.87e-24!39;UBERON:0006240!1.87e-24!39;UBERON:0002791!2.88e-24!29;UBERON:0003528!2.88e-24!29;UBERON:0001893!2.88e-24!29;UBERON:0007811!7.02e-20!86;UBERON:0000153!9.52e-18!94;UBERON:0000956!9.62e-16!21;UBERON:0001869!9.62e-16!21;UBERON:0000203!9.62e-16!21;UBERON:0002619!1.79e-12!17;UBERON:0002021!2.69e-10!10;UBERON:0000411!2.69e-10!10;UBERON:0001950!2.69e-10!10;UBERON:0002420!8.20e-10!8;UBERON:0007245!8.20e-10!8;UBERON:0010009!8.20e-10!8;UBERON:0010011!8.20e-10!8;UBERON:0000454!8.20e-10!8;UBERON:0003076!3.91e-09!12;UBERON:0003057!3.91e-09!12;UBERON:0002240!4.17e-08!6;UBERON:0005174!4.17e-08!6;UBERON:0001137!4.17e-08!6;UBERON:0000025!6.08e-08!114;UBERON:0002298!8.59e-08!6;UBERON:0004111!1.48e-07!122;UBERON:0001948!4.66e-07!5;UBERON:0002315!4.66e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.80e-36,54;UBERON:0001049,1.92e-31,52;UBERON:0005068,1.92e-31,52;UBERON:0006241,1.92e-31,52;UBERON:0007135,1.92e-31,52;UBERON:0001017,2.05e-30,73;UBERON:0001016,1.76e-29,75;UBERON:0002020,2.29e-27,34;UBERON:0002346,1.03e-24,64;UBERON:0003075,1.03e-24,64;UBERON:0007284,1.03e-24,64;UBERON:0002420,3.92e-24,8;UBERON:0007245,3.92e-24,8;UBERON:0010009,3.92e-24,8;UBERON:0010011,3.92e-24,8;UBERON:0000454,3.92e-24,8;UBERON:0004121,2.70e-22,95;UBERON:0000924,2.70e-22,95;UBERON:0006601,2.70e-22,95;UBERON:0002616,3.52e-21,46;UBERON:0010371,4.07e-21,73;UBERON:0000955,1.19e-20,47;UBERON:0006238,1.19e-20,47;UBERON:0003080,1.47e-19,40;UBERON:0003528,1.01e-18,29;UBERON:0002791,1.01e-18,29;UBERON:0001893,1.01e-18,29;UBERON:0002780,9.54e-18,39;UBERON:0001890,9.54e-18,39;UBERON:0006240,9.54e-18,39;UBERON:0010314,8.05e-16,92;UBERON:0000369,2.26e-15,5;UBERON:0002435,2.26e-15,5;UBERON:0000204,2.26e-15,5;UBERON:0010082,2.26e-15,5;UBERON:0003056,2.45e-15,49;UBERON:0002240,3.59e-14,6;UBERON:0005174,3.59e-14,6;UBERON:0001137,3.59e-14,6;UBERON:0002950,5.90e-13,4;UBERON:0001891,5.90e-13,4;UBERON:0009616,5.90e-13,4;UBERON:0010286,5.90e-13,4;UBERON:0003076,7.18e-13,12;UBERON:0003057,7.18e-13,12;UBERON:0000025,7.00e-12,114;UBERON:0001948,2.21e-11,5;UBERON:0002315,2.21e-11,5;UBERON:0004684,3.07e-11,3;UBERON:0002275,3.07e-11,3;UBERON:0004111,8.47e-11,122;UBERON:0002038,2.34e-10,3;UBERON:0009663,2.34e-10,3;UBERON:0009661,2.34e-10,3;UBERON:0000125,2.34e-10,3;UBERON:0002308,2.34e-10,3;UBERON:0011216,1.97e-08,194;UBERON:0002256,5.02e-08,2;UBERON:0001896,2.83e-07,2;UBERON:0002298,2.83e-07,2;UBERON:0005290,2.83e-07,2;UBERON:0010096,2.83e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.270011876663381,0.630974884054146,2.57085885963423,2.65042249141936,0.979926393719632,0.575072826109418,0.919218786610021,2.20231761998777,3.31987079021488,3.07213066512487,1.84640802822271,2.01272815925301,1.56274011167028,1.67509799400829,3.93933827022176,1.5279824777681,2.06240009831567,2.56269025438385,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,1.49790639404823,1.37250180845588,1.50785222535437,1.91206752211504,0.767146371990992,1.87009240103604,1.94689515681309,0,0,0,0,0,0.229902104433473,0,0,0.340182495756639,0.896796041993948,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.823236899034275,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,0.460325236507177,3.43737308063638,1.89038500578056,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.367687016900028,0,0,0,0,0,0,0.37456602987953,0.512201219238954,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.282328141245992,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0.463735671240843 | |||
|short_description=p2@Lhfpl4 | |||
}} |
Revision as of 21:51, 4 August 2015
Short description: | p2@Lhfpl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lhfpl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000060787, ENSMUST00000162280, NM_177763, uc009dev.1_5end |
EntrezGene: | 269788 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.08e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-25 | 23 |
neuron | 4.82e-17 | 33 |
neuronal stem cell | 4.82e-17 | 33 |
neuroblast | 4.82e-17 | 33 |
electrically signaling cell | 4.82e-17 | 33 |
electrically responsive cell | 5.56e-14 | 39 |
electrically active cell | 5.56e-14 | 39 |
neural cell | 2.04e-12 | 43 |
ectodermal cell | 4.54e-12 | 44 |
neurectodermal cell | 4.54e-12 | 44 |
raphe nuclei neuron | 3.07e-11 | 3 |
neuron of the substantia nigra | 2.34e-10 | 3 |
striatum neuron | 3.63e-10 | 3 |
neuron of the dorsal spinal cord | 5.02e-08 | 2 |