FFCP PHASE1:Mm9::chr1:166388648..166388661,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:166388648..166388661,+ | |||
|description=CAGE_peak_at_chr1:166388648..166388661,+ | |description=CAGE_peak_at_chr1:166388648..166388661,+ | ||
|id=chr1:166388648..166388661,+ | |id=chr1:166388648..166388661,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.14e-08!9;CL:0002251!3.14e-08!9 | |ontology_enrichment_celltype=CL:0002563!3.14e-08!9;CL:0002251!3.14e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.25e-26,9;CL:0002251,1.25e-26,9;CL:0000239,1.21e-18,6;CL:0000677,1.21e-18,6;CL:0000584,1.21e-18,6;CL:0000066,6.17e-18,25;CL:0000223,2.72e-16,20;CL:0000075,7.08e-16,7;CL:0002076,2.70e-15,15;CL:0002250,1.48e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.35e-11!15;UBERON:0001242!1.57e-10!13;UBERON:0000060!1.57e-10!13;UBERON:0001262!1.57e-10!13;UBERON:0004786!1.57e-10!13;UBERON:0000160!9.33e-10!43;UBERON:0003350!3.14e-08!9;UBERON:0004808!3.14e-08!9;UBERON:0001277!3.14e-08!9;UBERON:0000485!1.73e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.18e-27,31;UBERON:0000344,6.81e-27,15;UBERON:0003350,1.25e-26,9;UBERON:0004808,1.25e-26,9;UBERON:0001277,1.25e-26,9;UBERON:0001242,1.30e-26,13;UBERON:0001262,1.30e-26,13;UBERON:0004786,1.30e-26,13;UBERON:0000485,1.77e-21,11;UBERON:0005409,2.13e-18,47;UBERON:0004923,7.64e-16,24;UBERON:0001007,2.00e-07,116;UBERON:0001555,2.00e-07,116;UBERON:0007026,2.00e-07,116;UBERON:0004119,3.20e-07,118;UBERON:0000925,3.20e-07,118;UBERON:0006595,3.20e-07,118;UBERON:0001155,4.73e-07,2;UBERON:0000059,4.73e-07,2;UBERON:0004921,9.18e-07,114 | |||
|phase1_expression=0,5.58360652222978,5.45999087267443,15.7281389879552,17.5313505481222,1.51091344720701,2.80335168714631,0.129123323441576,0.140788722151667,0,0,0,0.342401459862411,0.262261207256992,0,0.202475267389826,0,0,0.274228867211478,0,0.595303031057488,0,0,1.27993938234725,0.68822784320151,3.44539178469012,1.7230479846363,0.861884930743556,0.950117097281869,1.51218077855958,0.665191531965914,0,0,0,2.02196133825892,1.32987716286794,2.45003227514843,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0,1.71390590642282,0,0.244981598429908,0.0958454710182364,0,0,0.383062014255563,0.614426133024974,0.131886287730194,0,0,0.837548997004143,0.56276261003168,0,0,0.284743361598206,1.3047961207771,0,0,1.73918693221007,0,0,1.07940638327563,0.649776417447669,0,0.983110940922263,0,0,0,0.985903938436763,0,0,0,0,0,0,1.37020655662872,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0.741584903203122,0,0,0,0.220841518460394,0,1.86391761218122,0,0,1.78819938646014,0,0,0,0.149790639404823,0,0.628271760564322,0,0.511430914660661,0,0.324482526135515,0.305518091550949,0.373220911830279,0.505445516867349,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0.540186184383045,0.710234206755631,0,0.462801338662135,0.232533944750408,0,0.350296027101508,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0.402619256281115,0.841159794256509,0.102904612379284,1.65209391491899,0.528901133327089,0.213288250535234,0,0.38660238396628,1.00841762311671,1.11189021922435,0.190225626112559,1.42358718463353,0.658795818896044,0,0.596869416123452,0,0,0.648414149624083,1.1948476395262,0.189667900953082,0.114248512609729,1.1270773567308,0.610953983535943,0.581857461502877,0.98190147846446,0.822074982615345,1.18088118383682,1.255989822731,1.48076596706161,0.889357881261447,0,0,0,0,0.72353147925725,0.25462585178142,0,0.648540907100142,0.274561413188081,0,0,0.312037673114561,0.505157755894224,0.358794827043824,0,0.554259570499814,0.189491411770485,0,0,0,0,0.238043640886014,0.780534591431195,0,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.608929898229199,0,0.21183207086382,0.220528398054962,0.8244312647074,0,0,0,0,1.45740418314925,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,1.09181281873089,0,0.247960367176008,0,0.388844919875379,0.621339313086926,0.56369293868419,0.448549638131936,0,0.388902376688095,0,0.168956125490778,0,0.5208175393758,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.906921534460845,0.221985953374065,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0.920650473014354,0.572895513439397,0.68741272937475,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0.256100609619477,0.114870937911227,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.355905054372522,0.0985044823755635,0,0.619747364743864,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,5.58360652222978,5.45999087267443,15.7281389879552,17.5313505481222,1.51091344720701,2.80335168714631,0.129123323441576,0.140788722151667,0,0,0,0.342401459862411,0.262261207256992,0,0.202475267389826,0,0,0.274228867211478,0,0.595303031057488,0,0,1.27993938234725,0.68822784320151,3.44539178469012,1.7230479846363,0.861884930743556,0.950117097281869,1.51218077855958,0.665191531965914,0,0,0,2.02196133825892,1.32987716286794,2.45003227514843,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0,1.71390590642282,0,0.244981598429908,0.0958454710182364,0,0,0.383062014255563,0.614426133024974,0.131886287730194,0,0,0.837548997004143,0.56276261003168,0,0,0.284743361598206,1.3047961207771,0,0,1.73918693221007,0,0,1.07940638327563,0.649776417447669,0,0.983110940922263,0,0,0,0.985903938436763,0,0,0,0,0,0,1.37020655662872,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0.741584903203122,0,0,0,0.220841518460394,0,1.86391761218122,0,0,1.78819938646014,0,0,0,0.149790639404823,0,0.628271760564322,0,0.511430914660661,0,0.324482526135515,0.305518091550949,0.373220911830279,0.505445516867349,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0.540186184383045,0.710234206755631,0,0.462801338662135,0.232533944750408,0,0.350296027101508,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0.402619256281115,0.841159794256509,0.102904612379284,1.65209391491899,0.528901133327089,0.213288250535234,0,0.38660238396628,1.00841762311671,1.11189021922435,0.190225626112559,1.42358718463353,0.658795818896044,0,0.596869416123452,0,0,0.648414149624083,1.1948476395262,0.189667900953082,0.114248512609729,1.1270773567308,0.610953983535943,0.581857461502877,0.98190147846446,0.822074982615345,1.18088118383682,1.255989822731,1.48076596706161,0.889357881261447,0,0,0,0,0.72353147925725,0.25462585178142,0,0.648540907100142,0.274561413188081,0,0,0.312037673114561,0.505157755894224,0.358794827043824,0,0.554259570499814,0.189491411770485,0,0,0,0,0.238043640886014,0.780534591431195,0,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.608929898229199,0,0.21183207086382,0.220528398054962,0.8244312647074,0,0,0,0,1.45740418314925,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,1.09181281873089,0,0.247960367176008,0,0.388844919875379,0.621339313086926,0.56369293868419,0.448549638131936,0,0.388902376688095,0,0.168956125490778,0,0.5208175393758,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.906921534460845,0.221985953374065,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0.920650473014354,0.572895513439397,0.68741272937475,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0.256100609619477,0.114870937911227,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.355905054372522,0.0985044823755635,0,0.619747364743864,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr1:166388648..166388661,+ | |short_description=p@chr1:166388648..166388661,+ | ||
}} | }} |
Latest revision as of 03:59, 5 August 2015
Short description: | p@chr1:166388648..166388661, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:166388648..166388661, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.25e-26 | 9 |
epithelial cell of alimentary canal | 1.25e-26 | 9 |
brush border epithelial cell | 1.21e-18 | 6 |
gut absorptive cell | 1.21e-18 | 6 |
enterocyte | 1.21e-18 | 6 |
epithelial cell | 6.17e-18 | 25 |
endodermal cell | 2.72e-16 | 20 |
columnar/cuboidal epithelial cell | 7.08e-16 | 7 |
endo-epithelial cell | 2.70e-15 | 15 |
intestinal crypt stem cell | 1.48e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.18e-27 | 31 |
mucosa | 6.81e-27 | 15 |
epithelium of mucosa | 1.25e-26 | 9 |
gastrointestinal system epithelium | 1.25e-26 | 9 |
intestinal epithelium | 1.25e-26 | 9 |
intestinal mucosa | 1.30e-26 | 13 |
wall of intestine | 1.30e-26 | 13 |
gastrointestinal system mucosa | 1.30e-26 | 13 |
simple columnar epithelium | 1.77e-21 | 11 |
gastrointestinal system | 2.13e-18 | 47 |
organ component layer | 7.64e-16 | 24 |
digestive system | 2.00e-07 | 116 |
digestive tract | 2.00e-07 | 116 |
primitive gut | 2.00e-07 | 116 |
endoderm-derived structure | 3.20e-07 | 118 |
endoderm | 3.20e-07 | 118 |
presumptive endoderm | 3.20e-07 | 118 |
colon | 4.73e-07 | 2 |
large intestine | 4.73e-07 | 2 |
subdivision of digestive tract | 9.18e-07 | 114 |