FFCP PHASE1:Mm9::chr9:44795249..44795263,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=233|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:44795249..44795263,-|id=chr9:44795249..44795263,-|ontology_enrichment_celltype=CL:0000838!1.82e-22!12;CL:0000084!8.91e-21!11;CL:0000827!8.91e-21!11;CL:0000542!1.74e-20!13;CL:0000051!1.74e-20!13;CL:0000791!1.21e-17!9;CL:0000789!1.21e-17!9;CL:0002420!1.21e-17!9;CL:0002419!1.21e-17!9;CL:0000790!1.21e-17!9;CL:0000624!5.88e-16!8;CL:0000988!3.90e-15!32;CL:0002032!3.90e-15!32;CL:0000037!3.90e-15!32;CL:0000566!3.90e-15!32;CL:0000837!3.90e-15!32;CL:0000738!6.64e-15!17;CL:0002087!6.64e-15!17;CL:0000893!2.16e-12!6;CL:0002489!2.16e-12!6;CL:0000898!2.16e-12!6;CL:0000809!2.16e-12!6;CL:0000810!2.16e-12!6;CL:0000895!2.16e-12!6;CL:0000808!2.16e-12!6;CL:0000894!2.16e-12!6;CL:0000806!2.16e-12!6;CL:0000807!2.16e-12!6;CL:0000805!2.16e-12!6;CL:0002425!2.16e-12!6;CL:0002436!2.16e-12!6;CL:0002427!2.16e-12!6;CL:0002428!2.16e-12!6;CL:0002429!2.16e-12!6;CL:0002433!2.16e-12!6;CL:0002431!2.16e-12!6;CL:0002432!2.16e-12!6;CL:0002031!2.54e-12!25;CL:0002320!4.39e-09!46;CL:0000134!4.39e-09!46;CL:0000219!4.46e-07!54|ontology_enrichment_celltype_v019_2=CL:0000838,7.06e-45,12;CL:0000084,2.33e-41,11;CL:0000827,2.33e-41,11;CL:0000542,2.83e-41,13;CL:0000051,2.83e-41,13;CL:0000791,7.65e-35,9;CL:0000789,7.65e-35,9;CL:0002420,7.65e-35,9;CL:0002419,7.65e-35,9;CL:0000790,7.65e-35,9;CL:0000624,2.45e-31,8;CL:0000738,4.30e-31,17;CL:0002087,4.30e-31,17;CL:0000893,6.15e-24,6;CL:0002489,6.15e-24,6;CL:0000898,6.15e-24,6;CL:0000809,6.15e-24,6;CL:0000810,6.15e-24,6;CL:0000895,6.15e-24,6;CL:0000808,6.15e-24,6;CL:0000894,6.15e-24,6;CL:0000806,6.15e-24,6;CL:0000807,6.15e-24,6;CL:0000805,6.15e-24,6;CL:0002425,6.15e-24,6;CL:0002436,6.15e-24,6;CL:0002427,6.15e-24,6;CL:0002428,6.15e-24,6;CL:0002429,6.15e-24,6;CL:0002433,6.15e-24,6;CL:0002431,6.15e-24,6;CL:0002432,6.15e-24,6;CL:0002031,1.73e-20,25;CL:0000988,1.50e-15,32;CL:0002032,1.50e-15,32;CL:0000037,1.50e-15,32;CL:0000837,1.50e-15,32;CL:0002320,3.53e-10,46;CL:0000134,3.53e-10,46;CL:0000219,2.33e-08,54;CL:0000723,4.54e-07,91;CL:0000048,4.54e-07,91|ontology_enrichment_disease=DOID:0060100!4.73e-07!3;DOID:4045!4.73e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,6.55e-13,3;DOID:4045,6.55e-13,3|ontology_enrichment_uberon=UBERON:0002370!2.17e-27!23;UBERON:0000974!2.17e-27!23;UBERON:0004807!2.17e-27!23;UBERON:0005058!2.17e-27!23;UBERON:0003351!2.17e-27!23;UBERON:0009113!2.17e-27!23;UBERON:0003295!2.17e-27!23;UBERON:0009722!2.17e-27!23;UBERON:0005562!2.17e-27!23;UBERON:0007690!2.17e-27!23;UBERON:0006562!5.12e-26!24;UBERON:0003408!5.12e-26!24;UBERON:0001557!5.12e-26!24;UBERON:0001042!5.12e-26!24;UBERON:0008814!5.12e-26!24;UBERON:0009145!5.12e-26!24;UBERON:0004177!1.02e-22!29;UBERON:0000072!1.64e-22!27;UBERON:0002193!2.28e-17!48;UBERON:0002390!3.73e-17!45;UBERON:0003061!3.73e-17!45;UBERON:0000063!4.03e-16!35;UBERON:0000065!6.55e-16!41;UBERON:0001004!2.16e-15!42;UBERON:0005057!5.71e-13!51;UBERON:0002405!6.06e-12!70;UBERON:0000490!2.96e-11!66;UBERON:0003929!1.75e-10!55;UBERON:0002368!4.08e-10!60;UBERON:0002384!4.39e-09!46;UBERON:0005911!5.94e-09!69;UBERON:0002530!6.72e-09!65;UBERON:0000949!1.71e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.55e-15,23;UBERON:0000974,2.55e-15,23;UBERON:0004807,2.55e-15,23;UBERON:0005058,2.55e-15,23;UBERON:0003351,2.55e-15,23;UBERON:0009113,2.55e-15,23;UBERON:0003295,2.55e-15,23;UBERON:0009722,2.55e-15,23;UBERON:0005562,2.55e-15,23;UBERON:0007690,2.55e-15,23;UBERON:0006562,1.29e-14,24;UBERON:0003408,1.29e-14,24;UBERON:0001557,1.29e-14,24;UBERON:0001042,1.29e-14,24;UBERON:0008814,1.29e-14,24;UBERON:0009145,1.29e-14,24;UBERON:0000072,8.21e-13,27;UBERON:0004177,8.12e-12,29;UBERON:0005057,8.12e-12,29;UBERON:0002384,3.53e-10,46;UBERON:0000077,1.63e-09,35;UBERON:0007811,3.33e-09,36;UBERON:0002193,6.60e-08,48;UBERON:0002405,6.60e-08,48;UBERON:0000065,6.95e-08,41;UBERON:0000490,8.96e-08,66;UBERON:0001004,1.17e-07,42;UBERON:0000153,1.92e-07,43;UBERON:0002390,4.85e-07,45;UBERON:0003061,4.85e-07,45|phase1_expression=0,0,0,0,0,0,0,9.68424925811822,12.3894075493467,14.2779361056416,6.16384685611818,4.06838010876216,6.16322627752341,7.60557501045277,0,0,0,0.157731082679119,0.548457734422955,0,0.17008658030214,1.19149141441062,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85944283031671,9.37602413428561,12.5645698553712,27.0586484494267,11.6117732442936,7.76816564849846,0,0,0,0,0,0,0,0,0,3.35565212115473,4.35217285206807,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.679913719975421,0.559805809294632,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.202725215290164,0.102710957164827,0.25984164595559,0.358053391334963,0.596044064343795,0.600977247599844,0.886137163047463,0.302899349844443,0.228620419965,0.504130925684203,1.07203668813728,1.53938946624527,2.68816875017609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:44795249..44795263,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:44795249..44795263,- | |||
|description=CAGE_peak_at_chr9:44795249..44795263,- | |||
|id=chr9:44795249..44795263,- | |||
|ontology_enrichment_celltype=CL:0000838!1.82e-22!12;CL:0000084!8.91e-21!11;CL:0000827!8.91e-21!11;CL:0000542!1.74e-20!13;CL:0000051!1.74e-20!13;CL:0000791!1.21e-17!9;CL:0000789!1.21e-17!9;CL:0002420!1.21e-17!9;CL:0002419!1.21e-17!9;CL:0000790!1.21e-17!9;CL:0000624!5.88e-16!8;CL:0000988!3.90e-15!32;CL:0002032!3.90e-15!32;CL:0000037!3.90e-15!32;CL:0000566!3.90e-15!32;CL:0000837!3.90e-15!32;CL:0000738!6.64e-15!17;CL:0002087!6.64e-15!17;CL:0000893!2.16e-12!6;CL:0002489!2.16e-12!6;CL:0000898!2.16e-12!6;CL:0000809!2.16e-12!6;CL:0000810!2.16e-12!6;CL:0000895!2.16e-12!6;CL:0000808!2.16e-12!6;CL:0000894!2.16e-12!6;CL:0000806!2.16e-12!6;CL:0000807!2.16e-12!6;CL:0000805!2.16e-12!6;CL:0002425!2.16e-12!6;CL:0002436!2.16e-12!6;CL:0002427!2.16e-12!6;CL:0002428!2.16e-12!6;CL:0002429!2.16e-12!6;CL:0002433!2.16e-12!6;CL:0002431!2.16e-12!6;CL:0002432!2.16e-12!6;CL:0002031!2.54e-12!25;CL:0002320!4.39e-09!46;CL:0000134!4.39e-09!46;CL:0000219!4.46e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.06e-45,12;CL:0000084,2.33e-41,11;CL:0000827,2.33e-41,11;CL:0000542,2.83e-41,13;CL:0000051,2.83e-41,13;CL:0000791,7.65e-35,9;CL:0000789,7.65e-35,9;CL:0002420,7.65e-35,9;CL:0002419,7.65e-35,9;CL:0000790,7.65e-35,9;CL:0000624,2.45e-31,8;CL:0000738,4.30e-31,17;CL:0002087,4.30e-31,17;CL:0000893,6.15e-24,6;CL:0002489,6.15e-24,6;CL:0000898,6.15e-24,6;CL:0000809,6.15e-24,6;CL:0000810,6.15e-24,6;CL:0000895,6.15e-24,6;CL:0000808,6.15e-24,6;CL:0000894,6.15e-24,6;CL:0000806,6.15e-24,6;CL:0000807,6.15e-24,6;CL:0000805,6.15e-24,6;CL:0002425,6.15e-24,6;CL:0002436,6.15e-24,6;CL:0002427,6.15e-24,6;CL:0002428,6.15e-24,6;CL:0002429,6.15e-24,6;CL:0002433,6.15e-24,6;CL:0002431,6.15e-24,6;CL:0002432,6.15e-24,6;CL:0002031,1.73e-20,25;CL:0000988,1.50e-15,32;CL:0002032,1.50e-15,32;CL:0000037,1.50e-15,32;CL:0000837,1.50e-15,32;CL:0002320,3.53e-10,46;CL:0000134,3.53e-10,46;CL:0000219,2.33e-08,54;CL:0000723,4.54e-07,91;CL:0000048,4.54e-07,91 | |||
|ontology_enrichment_disease=DOID:0060100!4.73e-07!3;DOID:4045!4.73e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.55e-13,3;DOID:4045,6.55e-13,3 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.17e-27!23;UBERON:0000974!2.17e-27!23;UBERON:0004807!2.17e-27!23;UBERON:0005058!2.17e-27!23;UBERON:0003351!2.17e-27!23;UBERON:0009113!2.17e-27!23;UBERON:0003295!2.17e-27!23;UBERON:0009722!2.17e-27!23;UBERON:0005562!2.17e-27!23;UBERON:0007690!2.17e-27!23;UBERON:0006562!5.12e-26!24;UBERON:0003408!5.12e-26!24;UBERON:0001557!5.12e-26!24;UBERON:0001042!5.12e-26!24;UBERON:0008814!5.12e-26!24;UBERON:0009145!5.12e-26!24;UBERON:0004177!1.02e-22!29;UBERON:0000072!1.64e-22!27;UBERON:0002193!2.28e-17!48;UBERON:0002390!3.73e-17!45;UBERON:0003061!3.73e-17!45;UBERON:0000063!4.03e-16!35;UBERON:0000065!6.55e-16!41;UBERON:0001004!2.16e-15!42;UBERON:0005057!5.71e-13!51;UBERON:0002405!6.06e-12!70;UBERON:0000490!2.96e-11!66;UBERON:0003929!1.75e-10!55;UBERON:0002368!4.08e-10!60;UBERON:0002384!4.39e-09!46;UBERON:0005911!5.94e-09!69;UBERON:0002530!6.72e-09!65;UBERON:0000949!1.71e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.55e-15,23;UBERON:0000974,2.55e-15,23;UBERON:0004807,2.55e-15,23;UBERON:0005058,2.55e-15,23;UBERON:0003351,2.55e-15,23;UBERON:0009113,2.55e-15,23;UBERON:0003295,2.55e-15,23;UBERON:0009722,2.55e-15,23;UBERON:0005562,2.55e-15,23;UBERON:0007690,2.55e-15,23;UBERON:0006562,1.29e-14,24;UBERON:0003408,1.29e-14,24;UBERON:0001557,1.29e-14,24;UBERON:0001042,1.29e-14,24;UBERON:0008814,1.29e-14,24;UBERON:0009145,1.29e-14,24;UBERON:0000072,8.21e-13,27;UBERON:0004177,8.12e-12,29;UBERON:0005057,8.12e-12,29;UBERON:0002384,3.53e-10,46;UBERON:0000077,1.63e-09,35;UBERON:0007811,3.33e-09,36;UBERON:0002193,6.60e-08,48;UBERON:0002405,6.60e-08,48;UBERON:0000065,6.95e-08,41;UBERON:0000490,8.96e-08,66;UBERON:0001004,1.17e-07,42;UBERON:0000153,1.92e-07,43;UBERON:0002390,4.85e-07,45;UBERON:0003061,4.85e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,9.68424925811822,12.3894075493467,14.2779361056416,6.16384685611818,4.06838010876216,6.16322627752341,7.60557501045277,0,0,0,0.157731082679119,0.548457734422955,0,0.17008658030214,1.19149141441062,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85944283031671,9.37602413428561,12.5645698553712,27.0586484494267,11.6117732442936,7.76816564849846,0,0,0,0,0,0,0,0,0,3.35565212115473,4.35217285206807,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.679913719975421,0.559805809294632,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.202725215290164,0.102710957164827,0.25984164595559,0.358053391334963,0.596044064343795,0.600977247599844,0.886137163047463,0.302899349844443,0.228620419965,0.504130925684203,1.07203668813728,1.53938946624527,2.68816875017609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:44795249..44795263,- | |||
}} |
Latest revision as of 04:30, 5 August 2015
Short description: | p@chr9:44795249..44795263, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:44795249..44795263, - |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.55e-15 | 23 |
neck | 2.55e-15 | 23 |
respiratory system epithelium | 2.55e-15 | 23 |
hemolymphoid system gland | 2.55e-15 | 23 |
pharyngeal epithelium | 2.55e-15 | 23 |
thymic region | 2.55e-15 | 23 |
pharyngeal gland | 2.55e-15 | 23 |
entire pharyngeal arch endoderm | 2.55e-15 | 23 |
thymus primordium | 2.55e-15 | 23 |
early pharyngeal endoderm | 2.55e-15 | 23 |
pharynx | 1.29e-14 | 24 |
gland of gut | 1.29e-14 | 24 |
upper respiratory tract | 1.29e-14 | 24 |
chordate pharynx | 1.29e-14 | 24 |
pharyngeal arch system | 1.29e-14 | 24 |
pharyngeal region of foregut | 1.29e-14 | 24 |
segment of respiratory tract | 8.21e-13 | 27 |
hemopoietic organ | 8.12e-12 | 29 |
immune organ | 8.12e-12 | 29 |
connective tissue | 3.53e-10 | 46 |
mixed endoderm/mesoderm-derived structure | 1.63e-09 | 35 |
craniocervical region | 3.33e-09 | 36 |
hemolymphoid system | 6.60e-08 | 48 |
immune system | 6.60e-08 | 48 |
respiratory tract | 6.95e-08 | 41 |
unilaminar epithelium | 8.96e-08 | 66 |
respiratory system | 1.17e-07 | 42 |
anterior region of body | 1.92e-07 | 43 |
hematopoietic system | 4.85e-07 | 45 |
blood island | 4.85e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.55e-13 | 3 |
muscle cancer | 6.55e-13 | 3 |