FFCP PHASE1:Mm9::chr9:51123998..51124004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |MCL_coexpression_id=88 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:51123998..51124004,+ | |||
|description=CAGE_peak_at_chr9:51123998..51124004,+ | |description=CAGE_peak_at_chr9:51123998..51124004,+ | ||
|id=chr9:51123998..51124004,+ | |id=chr9:51123998..51124004,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.53e-22!9;CL:0002251!3.53e-22!9;CL:0000239!2.79e-13!6;CL:0000677!2.79e-13!6;CL:0000212!2.79e-13!6;CL:0000584!2.79e-13!6;CL:0002076!8.95e-13!15;CL:0000075!2.45e-11!7;CL:0000066!5.46e-11!25;CL:0002250!1.03e-10!3;CL:0000223!3.02e-09!20 | |ontology_enrichment_celltype=CL:0002563!3.53e-22!9;CL:0002251!3.53e-22!9;CL:0000239!2.79e-13!6;CL:0000677!2.79e-13!6;CL:0000212!2.79e-13!6;CL:0000584!2.79e-13!6;CL:0002076!8.95e-13!15;CL:0000075!2.45e-11!7;CL:0000066!5.46e-11!25;CL:0002250!1.03e-10!3;CL:0000223!3.02e-09!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.19e-30,9;CL:0002251,3.19e-30,9;CL:0002250,6.33e-18,3;CL:0002076,6.40e-18,15;CL:0000239,3.35e-15,6;CL:0000677,3.35e-15,6;CL:0000584,3.35e-15,6;CL:0000223,2.73e-13,20;CL:0000075,4.58e-13,7;CL:0000066,1.67e-10,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.37e-38!15;UBERON:0001242!5.37e-33!13;UBERON:0000060!5.37e-33!13;UBERON:0001262!5.37e-33!13;UBERON:0004786!5.37e-33!13;UBERON:0000160!1.24e-30!43;UBERON:0004923!5.26e-23!24;UBERON:0003350!3.53e-22!9;UBERON:0004808!3.53e-22!9;UBERON:0001277!3.53e-22!9;UBERON:0005409!4.27e-21!59;UBERON:0000485!6.61e-18!11;UBERON:0001007!2.63e-11!128;UBERON:0001555!2.63e-11!128;UBERON:0007026!2.63e-11!128;UBERON:0004119!4.72e-11!130;UBERON:0000925!4.72e-11!130;UBERON:0006595!4.72e-11!130;UBERON:0000331!7.46e-10!3;UBERON:0002116!7.46e-10!3;UBERON:0001204!7.46e-10!3;UBERON:0001168!7.46e-10!3;UBERON:0004921!2.61e-09!126;UBERON:0004185!2.61e-09!126;UBERON:0001962!4.79e-07!2;UBERON:0001961!4.79e-07!2;UBERON:0001744!4.79e-07!2 | |ontology_enrichment_uberon=UBERON:0000344!1.37e-38!15;UBERON:0001242!5.37e-33!13;UBERON:0000060!5.37e-33!13;UBERON:0001262!5.37e-33!13;UBERON:0004786!5.37e-33!13;UBERON:0000160!1.24e-30!43;UBERON:0004923!5.26e-23!24;UBERON:0003350!3.53e-22!9;UBERON:0004808!3.53e-22!9;UBERON:0001277!3.53e-22!9;UBERON:0005409!4.27e-21!59;UBERON:0000485!6.61e-18!11;UBERON:0001007!2.63e-11!128;UBERON:0001555!2.63e-11!128;UBERON:0007026!2.63e-11!128;UBERON:0004119!4.72e-11!130;UBERON:0000925!4.72e-11!130;UBERON:0006595!4.72e-11!130;UBERON:0000331!7.46e-10!3;UBERON:0002116!7.46e-10!3;UBERON:0001204!7.46e-10!3;UBERON:0001168!7.46e-10!3;UBERON:0004921!2.61e-09!126;UBERON:0004185!2.61e-09!126;UBERON:0001962!4.79e-07!2;UBERON:0001961!4.79e-07!2;UBERON:0001744!4.79e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.47e-38,31;UBERON:0000344,5.72e-36,15;UBERON:0001242,6.82e-34,13;UBERON:0001262,6.82e-34,13;UBERON:0004786,6.82e-34,13;UBERON:0003350,3.19e-30,9;UBERON:0004808,3.19e-30,9;UBERON:0001277,3.19e-30,9;UBERON:0005409,7.15e-25,47;UBERON:0000485,1.23e-24,11;UBERON:0004923,4.67e-22,24;UBERON:0002108,6.26e-13,4;UBERON:0001007,1.98e-10,116;UBERON:0001555,1.98e-10,116;UBERON:0007026,1.98e-10,116;UBERON:0004119,3.22e-10,118;UBERON:0000925,3.22e-10,118;UBERON:0006595,3.22e-10,118;UBERON:0004921,3.67e-09,114;UBERON:0000331,3.32e-08,3;UBERON:0002116,3.32e-08,3;UBERON:0001204,3.32e-08,3;UBERON:0001168,3.32e-08,3 | |||
|phase1_expression=0,1.74487703819681,0,11.7961042409664,16.0286633582831,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,0.91763712426868,0,0.86152399231815,0.861884930743556,1.14014051673824,0.756090389279792,2.88249663851896,0,0,0,3.75507105676657,2.49351968037739,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.64450566663544,0,0,0.128867461322093,0,0,0,1.89811624617805,0,0.502670417600539,0,0,0,2.16138049874694,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44292937929755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,0,11.7961042409664,16.0286633582831,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,0.91763712426868,0,0.86152399231815,0.861884930743556,1.14014051673824,0.756090389279792,2.88249663851896,0,0,0,3.75507105676657,2.49351968037739,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.64450566663544,0,0,0.128867461322093,0,0,0,1.89811624617805,0,0.502670417600539,0,0,0,2.16138049874694,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44292937929755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:51123998..51124004,+ | |short_description=p@chr9:51123998..51124004,+ | ||
}} | }} |
Latest revision as of 07:13, 5 August 2015
Short description: | p@chr9:51123998..51124004, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:51123998..51124004, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.19e-30 | 9 |
epithelial cell of alimentary canal | 3.19e-30 | 9 |
intestinal crypt stem cell | 6.33e-18 | 3 |
endo-epithelial cell | 6.40e-18 | 15 |
brush border epithelial cell | 3.35e-15 | 6 |
gut absorptive cell | 3.35e-15 | 6 |
enterocyte | 3.35e-15 | 6 |
endodermal cell | 2.73e-13 | 20 |
columnar/cuboidal epithelial cell | 4.58e-13 | 7 |
epithelial cell | 1.67e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.47e-38 | 31 |
mucosa | 5.72e-36 | 15 |
intestinal mucosa | 6.82e-34 | 13 |
wall of intestine | 6.82e-34 | 13 |
gastrointestinal system mucosa | 6.82e-34 | 13 |
epithelium of mucosa | 3.19e-30 | 9 |
gastrointestinal system epithelium | 3.19e-30 | 9 |
intestinal epithelium | 3.19e-30 | 9 |
gastrointestinal system | 7.15e-25 | 47 |
simple columnar epithelium | 1.23e-24 | 11 |
organ component layer | 4.67e-22 | 24 |
small intestine | 6.26e-13 | 4 |
digestive system | 1.98e-10 | 116 |
digestive tract | 1.98e-10 | 116 |
primitive gut | 1.98e-10 | 116 |
endoderm-derived structure | 3.22e-10 | 118 |
endoderm | 3.22e-10 | 118 |
presumptive endoderm | 3.22e-10 | 118 |
subdivision of digestive tract | 3.67e-09 | 114 |
ileal mucosa | 3.32e-08 | 3 |
ileum | 3.32e-08 | 3 |
mucosa of small intestine | 3.32e-08 | 3 |
wall of small intestine | 3.32e-08 | 3 |