FFCP PHASE1:Mm9::chr17:85293136..85293172,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:85293136..85293172,+ | |||
|description=CAGE_peak_at_chr17:85293136..85293172,+ | |description=CAGE_peak_at_chr17:85293136..85293172,+ | ||
|id=chr17:85293136..85293172,+ | |id=chr17:85293136..85293172,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.57e-24!9;CL:0002251!4.57e-24!9;CL:0000239!7.90e-17!6;CL:0000677!7.90e-17!6;CL:0000212!7.90e-17!6;CL:0000584!7.90e-17!6;CL:0000075!2.60e-14!7;CL:0000066!9.90e-14!25;CL:0002076!1.04e-13!15;CL:0000223!7.82e-10!20;CL:0000473!5.12e-09!3;CL:0000627!5.12e-09!3;CL:0000682!5.12e-09!3;CL:0002250!8.28e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.42e-42,9;CL:0002251,6.42e-42,9;CL:0000239,8.58e-36,6;CL:0000677,8.58e-36,6;CL:0000584,8.58e-36,6;CL:0000075,1.17e-30,7;CL:0000066,1.26e-27,25;CL:0002076,6.84e-25,15;CL:0000223,1.74e-18,20;CL:0000682,3.06e-18,3;CL:0002250,5.92e-09,3;CL:0000473,3.85e-08,7;CL:0000815,2.79e-07,1;CL:0000792,2.79e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.58e-37!15;UBERON:0001242!3.88e-33!13;UBERON:0000060!3.88e-33!13;UBERON:0001262!3.88e-33!13;UBERON:0004786!3.88e-33!13;UBERON:0000160!3.30e-27!43;UBERON:0003350!4.57e-24!9;UBERON:0004808!4.57e-24!9;UBERON:0001277!4.57e-24!9;UBERON:0004923!5.46e-22!24;UBERON:0000485!2.33e-19!11;UBERON:0005409!2.19e-18!59;UBERON:0001007!1.05e-09!128;UBERON:0001555!1.05e-09!128;UBERON:0007026!1.05e-09!128;UBERON:0004119!1.84e-09!130;UBERON:0000925!1.84e-09!130;UBERON:0006595!1.84e-09!130;UBERON:0000331!3.77e-08!3;UBERON:0002116!3.77e-08!3;UBERON:0001204!3.77e-08!3;UBERON:0001168!3.77e-08!3;UBERON:0004921!3.98e-08!126;UBERON:0004185!3.98e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.42e-42,9;UBERON:0004808,6.42e-42,9;UBERON:0001277,6.42e-42,9;UBERON:0001242,3.55e-36,13;UBERON:0001262,3.55e-36,13;UBERON:0004786,3.55e-36,13;UBERON:0000485,3.48e-34,11;UBERON:0000344,3.05e-31,15;UBERON:0000160,8.55e-22,31;UBERON:0004923,3.44e-19,24;UBERON:0005409,6.14e-14,47 | |||
|phase1_expression=0,6.63053274514786,10.0099832665698,13.3084252975005,13.023288978605,2.35030980676646,1.63528848416868,3.61545305636414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,3.44539178469012,4.30761996159075,2.37018355954478,0.380046838912748,0.504060259519861,0.886922042621219,0,0,0,4.62162591602039,0.498703936075477,3.47087905646027,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,2.31293148088659,2.64450566663544,0,0,0.128867461322093,0.201683524623343,0.667134131534611,0.190225626112559,0,0,0,0.198956472041151,0,0,0.432276099749388,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,6.63053274514786,10.0099832665698,13.3084252975005,13.023288978605,2.35030980676646,1.63528848416868,3.61545305636414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,3.44539178469012,4.30761996159075,2.37018355954478,0.380046838912748,0.504060259519861,0.886922042621219,0,0,0,4.62162591602039,0.498703936075477,3.47087905646027,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,2.31293148088659,2.64450566663544,0,0,0.128867461322093,0.201683524623343,0.667134131534611,0.190225626112559,0,0,0,0.198956472041151,0,0,0.432276099749388,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:85293136..85293172,+ | |short_description=p@chr17:85293136..85293172,+ | ||
}} | }} |
Latest revision as of 10:36, 5 August 2015
Short description: | p@chr17:85293136..85293172, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:85293136..85293172, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.42e-42 | 9 |
epithelial cell of alimentary canal | 6.42e-42 | 9 |
brush border epithelial cell | 8.58e-36 | 6 |
gut absorptive cell | 8.58e-36 | 6 |
enterocyte | 8.58e-36 | 6 |
columnar/cuboidal epithelial cell | 1.17e-30 | 7 |
epithelial cell | 1.26e-27 | 25 |
endo-epithelial cell | 6.84e-25 | 15 |
endodermal cell | 1.74e-18 | 20 |
M cell of gut | 3.06e-18 | 3 |
intestinal crypt stem cell | 5.92e-09 | 3 |
defensive cell | 3.85e-08 | 7 |
regulatory T cell | 2.79e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 6.42e-42 | 9 |
gastrointestinal system epithelium | 6.42e-42 | 9 |
intestinal epithelium | 6.42e-42 | 9 |
intestinal mucosa | 3.55e-36 | 13 |
wall of intestine | 3.55e-36 | 13 |
gastrointestinal system mucosa | 3.55e-36 | 13 |
simple columnar epithelium | 3.48e-34 | 11 |
mucosa | 3.05e-31 | 15 |
intestine | 8.55e-22 | 31 |
organ component layer | 3.44e-19 | 24 |
gastrointestinal system | 6.14e-14 | 47 |