FFCP PHASE1:Mm9::chr13:118391309..118391320,+: Difference between revisions
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{{FFCP|EntrezGene=15165|HGNC=|MCL_coexpression_id=238|UniProt=O88704|association_with_transcript=22bp_to_ENSMUST00000006991_5end|description=CAGE_peak_3_at_Hcn1_5end|id=chr13:118391309..118391320,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,3.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.61e-19!63;UBERON:0003056!5.75e-18!49;UBERON:0002346!3.52e-17!71;UBERON:0003075!3.52e-17!71;UBERON:0007284!3.52e-17!71;UBERON:0001049!6.04e-17!52;UBERON:0005068!6.04e-17!52;UBERON:0006241!6.04e-17!52;UBERON:0007135!6.04e-17!52;UBERON:0000955!2.14e-16!50;UBERON:0006238!2.14e-16!50;UBERON:0002616!1.15e-15!49;UBERON:0007811!9.17e-15!86;UBERON:0000153!1.84e-14!94;UBERON:0003080!1.30e-13!40;UBERON:0002780!7.55e-13!39;UBERON:0001890!7.55e-13!39;UBERON:0006240!7.55e-13!39;UBERON:0004121!2.08e-12!102;UBERON:0000924!2.08e-12!102;UBERON:0006601!2.08e-12!102;UBERON:0000073!3.11e-12!75;UBERON:0001016!3.11e-12!75;UBERON:0001017!4.48e-11!73;UBERON:0005743!4.48e-11!73;UBERON:0002020!1.21e-09!34;UBERON:0002021!3.46e-09!10;UBERON:0000411!3.46e-09!10;UBERON:0001950!3.46e-09!10;UBERON:0002791!9.80e-09!29;UBERON:0003528!9.80e-09!29;UBERON:0001893!9.80e-09!29;UBERON:0002619!7.23e-08!17;UBERON:0000956!7.33e-08!21;UBERON:0001869!7.33e-08!21;UBERON:0000203!7.33e-08!21;UBERON:0000025!2.84e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.06e-29,64;UBERON:0003075,4.06e-29,64;UBERON:0007284,4.06e-29,64;UBERON:0003056,5.81e-27,49;UBERON:0000955,8.52e-27,47;UBERON:0006238,8.52e-27,47;UBERON:0002616,4.01e-25,46;UBERON:0010371,1.32e-24,73;UBERON:0001049,9.74e-24,52;UBERON:0005068,9.74e-24,52;UBERON:0006241,9.74e-24,52;UBERON:0007135,9.74e-24,52;UBERON:0004121,2.99e-23,95;UBERON:0000924,2.99e-23,95;UBERON:0006601,2.99e-23,95;UBERON:0000073,2.43e-22,54;UBERON:0002021,1.54e-21,10;UBERON:0000411,1.54e-21,10;UBERON:0001950,1.54e-21,10;UBERON:0010314,1.07e-20,92;UBERON:0001016,1.29e-20,75;UBERON:0003080,5.32e-20,40;UBERON:0003528,8.07e-19,29;UBERON:0002791,8.07e-19,29;UBERON:0001893,8.07e-19,29;UBERON:0002780,2.40e-18,39;UBERON:0001890,2.40e-18,39;UBERON:0006240,2.40e-18,39;UBERON:0001017,4.88e-18,73;UBERON:0002619,3.89e-17,17;UBERON:0000956,1.11e-15,21;UBERON:0001869,1.11e-15,21;UBERON:0000203,1.11e-15,21;UBERON:0002020,1.99e-15,34;UBERON:0002950,1.96e-09,4;UBERON:0001891,1.96e-09,4;UBERON:0009616,1.96e-09,4;UBERON:0010286,1.96e-09,4;UBERON:0000025,5.55e-09,114;UBERON:0004111,8.03e-09,122;UBERON:0000970,8.17e-08,9;UBERON:0000019,8.17e-08,9;UBERON:0000047,8.17e-08,9;UBERON:0010312,8.17e-08,9;UBERON:0004088,8.17e-08,9;UBERON:0002104,8.17e-08,9;UBERON:0001456,8.17e-08,9;UBERON:0003072,8.17e-08,9;UBERON:0004128,8.17e-08,9;UBERON:0003071,8.17e-08,9;UBERON:0000483,2.71e-07,174;UBERON:0002038,3.17e-07,3;UBERON:0009663,3.17e-07,3;UBERON:0009661,3.17e-07,3;UBERON:0000125,3.17e-07,3;UBERON:0002308,3.17e-07,3;UBERON:0000119,4.00e-07,176|phase1_expression=0,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0.367472397644862,0.191690942036473,0,0,0.638436690425939,2.30409799884365,0,0,0,3.07101298901519,2.25105044012672,5.80633341551878,0.883885756421003,0.284743361598206,0.559198337475902,1.66597625333005,7.48158445057177,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0.346970653532272,0,0.230615497256059,0,0,0,0.494389935468748,0,0,0,0,0,0,2.04946557908083,4.1889341362691,0.255457055208591,0,0,0,5.99162557619291,4.11750542536764,0.251308704225729,2.60736480288415,6.39288643325826,1.87009240103604,4.2182728397617,0.101839363850316,0,0,1.05220927943237,0,0.459804208866946,0.720248519221397,2.26057226753573,1.97305847538851,2.3060469651273,5.62210347358373,3.62184719034622,0,0.378212160335639,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.32833492815819,0.405344047729279,0,1.09775057645525,1.20785776884335,5.04695876553905,2.46971069710283,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0.478364305972461,0.327726629431476,0,0,0,0,0,0,6.10092241953609,4.57125577709592,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,4.17717711348349,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,1.50035924522115,0.886701168211368,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15165 | |||
|HGNC= | |||
|MCL_coexpression_id=238 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88704 | |||
|association_with_transcript=22bp_to_ENSMUST00000006991_5end | |||
|cluster_id=chr13:118391309..118391320,+ | |||
|description=CAGE_peak_3_at_Hcn1_5end | |||
|id=chr13:118391309..118391320,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,3.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.61e-19!63;UBERON:0003056!5.75e-18!49;UBERON:0002346!3.52e-17!71;UBERON:0003075!3.52e-17!71;UBERON:0007284!3.52e-17!71;UBERON:0001049!6.04e-17!52;UBERON:0005068!6.04e-17!52;UBERON:0006241!6.04e-17!52;UBERON:0007135!6.04e-17!52;UBERON:0000955!2.14e-16!50;UBERON:0006238!2.14e-16!50;UBERON:0002616!1.15e-15!49;UBERON:0007811!9.17e-15!86;UBERON:0000153!1.84e-14!94;UBERON:0003080!1.30e-13!40;UBERON:0002780!7.55e-13!39;UBERON:0001890!7.55e-13!39;UBERON:0006240!7.55e-13!39;UBERON:0004121!2.08e-12!102;UBERON:0000924!2.08e-12!102;UBERON:0006601!2.08e-12!102;UBERON:0000073!3.11e-12!75;UBERON:0001016!3.11e-12!75;UBERON:0001017!4.48e-11!73;UBERON:0005743!4.48e-11!73;UBERON:0002020!1.21e-09!34;UBERON:0002021!3.46e-09!10;UBERON:0000411!3.46e-09!10;UBERON:0001950!3.46e-09!10;UBERON:0002791!9.80e-09!29;UBERON:0003528!9.80e-09!29;UBERON:0001893!9.80e-09!29;UBERON:0002619!7.23e-08!17;UBERON:0000956!7.33e-08!21;UBERON:0001869!7.33e-08!21;UBERON:0000203!7.33e-08!21;UBERON:0000025!2.84e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.06e-29,64;UBERON:0003075,4.06e-29,64;UBERON:0007284,4.06e-29,64;UBERON:0003056,5.81e-27,49;UBERON:0000955,8.52e-27,47;UBERON:0006238,8.52e-27,47;UBERON:0002616,4.01e-25,46;UBERON:0010371,1.32e-24,73;UBERON:0001049,9.74e-24,52;UBERON:0005068,9.74e-24,52;UBERON:0006241,9.74e-24,52;UBERON:0007135,9.74e-24,52;UBERON:0004121,2.99e-23,95;UBERON:0000924,2.99e-23,95;UBERON:0006601,2.99e-23,95;UBERON:0000073,2.43e-22,54;UBERON:0002021,1.54e-21,10;UBERON:0000411,1.54e-21,10;UBERON:0001950,1.54e-21,10;UBERON:0010314,1.07e-20,92;UBERON:0001016,1.29e-20,75;UBERON:0003080,5.32e-20,40;UBERON:0003528,8.07e-19,29;UBERON:0002791,8.07e-19,29;UBERON:0001893,8.07e-19,29;UBERON:0002780,2.40e-18,39;UBERON:0001890,2.40e-18,39;UBERON:0006240,2.40e-18,39;UBERON:0001017,4.88e-18,73;UBERON:0002619,3.89e-17,17;UBERON:0000956,1.11e-15,21;UBERON:0001869,1.11e-15,21;UBERON:0000203,1.11e-15,21;UBERON:0002020,1.99e-15,34;UBERON:0002950,1.96e-09,4;UBERON:0001891,1.96e-09,4;UBERON:0009616,1.96e-09,4;UBERON:0010286,1.96e-09,4;UBERON:0000025,5.55e-09,114;UBERON:0004111,8.03e-09,122;UBERON:0000970,8.17e-08,9;UBERON:0000019,8.17e-08,9;UBERON:0000047,8.17e-08,9;UBERON:0010312,8.17e-08,9;UBERON:0004088,8.17e-08,9;UBERON:0002104,8.17e-08,9;UBERON:0001456,8.17e-08,9;UBERON:0003072,8.17e-08,9;UBERON:0004128,8.17e-08,9;UBERON:0003071,8.17e-08,9;UBERON:0000483,2.71e-07,174;UBERON:0002038,3.17e-07,3;UBERON:0009663,3.17e-07,3;UBERON:0009661,3.17e-07,3;UBERON:0000125,3.17e-07,3;UBERON:0002308,3.17e-07,3;UBERON:0000119,4.00e-07,176 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0.367472397644862,0.191690942036473,0,0,0.638436690425939,2.30409799884365,0,0,0,3.07101298901519,2.25105044012672,5.80633341551878,0.883885756421003,0.284743361598206,0.559198337475902,1.66597625333005,7.48158445057177,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0.346970653532272,0,0.230615497256059,0,0,0,0.494389935468748,0,0,0,0,0,0,2.04946557908083,4.1889341362691,0.255457055208591,0,0,0,5.99162557619291,4.11750542536764,0.251308704225729,2.60736480288415,6.39288643325826,1.87009240103604,4.2182728397617,0.101839363850316,0,0,1.05220927943237,0,0.459804208866946,0.720248519221397,2.26057226753573,1.97305847538851,2.3060469651273,5.62210347358373,3.62184719034622,0,0.378212160335639,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.32833492815819,0.405344047729279,0,1.09775057645525,1.20785776884335,5.04695876553905,2.46971069710283,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0.478364305972461,0.327726629431476,0,0,0,0,0,0,6.10092241953609,4.57125577709592,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,4.17717711348349,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,1.50035924522115,0.886701168211368,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,7.04616147639937,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0.358053391334963,0.596044064343795,0.240390899039938,0.147689527174577,0.100966449948148,0.304827226619999,0.302478555410522,0.0974578807397524,0.288635524920988,0,0,0,0.0897138566094757,0,3.09103350451505,0,0,0,0,3.95326289831947,2.76195141904306,4.01026859407578,2.92150409984269,4.7955776383945,4.5323633843382,4.05013500139084,4.05289082901798,5.89085131679466,9.31968561153276,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0.64183841918363,0,0.25347929989024,0.565879024158229,0.280924522409647,0.0640251524048693,0.287177344778066,0.476293691283074,0.347652977834566,0.964546102318525,0,0.147198920134397,1.02860775715625,0.532427418478012,0,0.145346416632329,0.376437521661322,0.423073039458382,0.73171189149109,0.263069711437843,0.679020569229309,0,0.355905054372522,0.394017929502254,0.409231043169689,0.619747364743864,0.192906610981141,0,0,0,0.191288332068843,0,0.695603506861264 | |||
|short_description=p3@Hcn1 | |||
}} |
Revision as of 15:50, 5 August 2015
Short description: | p3@Hcn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hcn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:238 |
Association with transcript: | 22bp_to_ENSMUST00000006991_5end |
EntrezGene: | 15165 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 3.17e-07 | 3 |