FFCP PHASE1:Mm9::chr13:3610228..3610244,-: Difference between revisions
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{{FFCP|EntrezGene=105203|HGNC=|MCL_coexpression_id=266|UniProt=Q5DTT3,E9PYT9,Q3TAG2|association_with_transcript=109bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end|description=CAGE_peak_7_at_BC016423_5end|id=chr13:3610228..3610244,-|ontology_enrichment_celltype=CL:0000791!3.68e-07!9;CL:0000789!3.68e-07!9;CL:0002420!3.68e-07!9;CL:0002419!3.68e-07!9;CL:0000790!3.68e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,6.07e-11,9;CL:0000789,6.07e-11,9;CL:0002420,6.07e-11,9;CL:0002419,6.07e-11,9;CL:0000790,6.07e-11,9;CL:0000988,1.08e-10,32;CL:0002032,1.08e-10,32;CL:0000037,1.08e-10,32;CL:0000837,1.08e-10,32;CL:0000624,6.71e-10,8;CL:0000838,1.71e-09,12;CL:0000542,1.68e-08,13;CL:0000051,1.68e-08,13;CL:0000084,2.08e-08,11;CL:0000827,2.08e-08,11;CL:0002031,4.02e-08,25;CL:0000893,7.32e-08,6;CL:0002489,7.32e-08,6;CL:0000898,7.32e-08,6;CL:0000809,7.32e-08,6;CL:0000810,7.32e-08,6;CL:0000895,7.32e-08,6;CL:0000808,7.32e-08,6;CL:0000894,7.32e-08,6;CL:0000806,7.32e-08,6;CL:0000807,7.32e-08,6;CL:0000805,7.32e-08,6;CL:0002425,7.32e-08,6;CL:0002436,7.32e-08,6;CL:0002427,7.32e-08,6;CL:0002428,7.32e-08,6;CL:0002429,7.32e-08,6;CL:0002433,7.32e-08,6;CL:0002431,7.32e-08,6;CL:0002432,7.32e-08,6;CL:0002320,5.48e-07,46;CL:0000134,5.48e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.48e-08!29;UBERON:0002370!1.15e-07!23;UBERON:0000974!1.15e-07!23;UBERON:0004807!1.15e-07!23;UBERON:0005058!1.15e-07!23;UBERON:0003351!1.15e-07!23;UBERON:0009113!1.15e-07!23;UBERON:0003295!1.15e-07!23;UBERON:0009722!1.15e-07!23;UBERON:0005562!1.15e-07!23;UBERON:0007690!1.15e-07!23;UBERON:0002193!1.51e-07!48;UBERON:0003408!1.66e-07!24;UBERON:0006562!6.15e-07!24;UBERON:0001557!6.15e-07!24;UBERON:0001042!6.15e-07!24;UBERON:0008814!6.15e-07!24;UBERON:0009145!6.15e-07!24;UBERON:0002390!7.73e-07!45;UBERON:0003061!7.73e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.88e-13,45;UBERON:0003061,1.88e-13,45;UBERON:0002193,2.47e-13,48;UBERON:0002405,2.47e-13,48;UBERON:0004177,1.91e-12,29;UBERON:0005057,1.91e-12,29;UBERON:0002370,2.73e-11,23;UBERON:0000974,2.73e-11,23;UBERON:0004807,2.73e-11,23;UBERON:0005058,2.73e-11,23;UBERON:0003351,2.73e-11,23;UBERON:0009113,2.73e-11,23;UBERON:0003295,2.73e-11,23;UBERON:0009722,2.73e-11,23;UBERON:0005562,2.73e-11,23;UBERON:0007690,2.73e-11,23;UBERON:0006562,1.43e-10,24;UBERON:0003408,1.43e-10,24;UBERON:0001557,1.43e-10,24;UBERON:0001042,1.43e-10,24;UBERON:0008814,1.43e-10,24;UBERON:0009145,1.43e-10,24;UBERON:0000077,4.89e-10,35;UBERON:0000153,1.20e-09,43;UBERON:0003081,3.76e-09,87;UBERON:0000072,9.34e-09,27;UBERON:0007811,1.30e-08,36;UBERON:0000926,3.19e-07,120;UBERON:0004120,3.19e-07,120;UBERON:0006603,3.19e-07,120;UBERON:0002384,5.48e-07,46|phase1_expression=0.80074423552397,1.04692622291808,0,0.90739263392049,0.500895729946347,0.839396359559449,1.16806320297763,2.1950964985068,16.3314917695933,13.3416780003536,2.91070545983358,3.66951931378547,2.56801094896809,2.09808965805594,1.99865857089398,2.02475267389826,0.699561878128147,5.99378114180652,6.58149281307546,2.97072756258621,1.36069264241712,0.297872853602656,0.783599367416806,0.799962113967033,0.91763712426868,0.57423196411502,1.29228598847722,0.215471232685889,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0,0.612508068787107,0,0,0.523523743973798,0.588231488031014,0,0,0.377690453926732,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0,0,0,12.5836954543302,6.5282592781021,3.02484419228218,1.28629718017973,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0.571301968807607,0.441737081903227,0.367472397644862,0.287536413054709,0,1.10115880999389,0.893811366596314,0.46081959976873,0.659431438650969,0.731901148819277,0,0.558365998002762,1.12552522006336,0.30559649555362,0.883885756421003,0.996601765593721,0.931997229126503,0.605809546665472,0.302286240427142,0.869593466105033,1.72084775396277,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0.852151612890289,0.779358013808606,1.41335829804136,2.25349471642689,2.56652954828636,2.54805239706646,7.11066703153331,0.432982082022428,0.760079596425296,0,0.22836775943812,8.54495016035667,0.29688427812965,0.520455980298408,0,0.691846491768175,0.60289056221049,0.705532242814229,0.251333182659351,0.247194967734374,1.73519228303894,0,0.485300549842228,1.32504911076236,0.969750506270444,0,0.292780797011547,0.209446706813455,0.766371165625774,1.07833612055328,4.19931911695385,1.39777249780371,0.748953197024114,0.457500602818626,1.50785222535437,0.347648640384553,1.02286182932132,0,1.1356888414743,0.81471491080253,1.36847667671102,0.252722758433675,0.420883711772948,1.43132487258974,0.919608417733892,0.720248519221397,1.05493372485001,0.748401490664606,1.40925092313335,0.374806898238915,0.776110112217047,0.646703978798527,1.32374256117473,1.40760899331159,1.53437012699302,1.94633074457919,0,0.411564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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:105203 | |||
|HGNC= | |||
|MCL_coexpression_id=266 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5DTT3,uniprot:E9PYT9,uniprot:Q3TAG2 | |||
|association_with_transcript=109bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end | |||
|cluster_id=chr13:3610228..3610244,- | |||
|description=CAGE_peak_7_at_BC016423_5end | |||
|id=chr13:3610228..3610244,- | |||
|ontology_enrichment_celltype=CL:0000791!3.68e-07!9;CL:0000789!3.68e-07!9;CL:0002420!3.68e-07!9;CL:0002419!3.68e-07!9;CL:0000790!3.68e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.07e-11,9;CL:0000789,6.07e-11,9;CL:0002420,6.07e-11,9;CL:0002419,6.07e-11,9;CL:0000790,6.07e-11,9;CL:0000988,1.08e-10,32;CL:0002032,1.08e-10,32;CL:0000037,1.08e-10,32;CL:0000837,1.08e-10,32;CL:0000624,6.71e-10,8;CL:0000838,1.71e-09,12;CL:0000542,1.68e-08,13;CL:0000051,1.68e-08,13;CL:0000084,2.08e-08,11;CL:0000827,2.08e-08,11;CL:0002031,4.02e-08,25;CL:0000893,7.32e-08,6;CL:0002489,7.32e-08,6;CL:0000898,7.32e-08,6;CL:0000809,7.32e-08,6;CL:0000810,7.32e-08,6;CL:0000895,7.32e-08,6;CL:0000808,7.32e-08,6;CL:0000894,7.32e-08,6;CL:0000806,7.32e-08,6;CL:0000807,7.32e-08,6;CL:0000805,7.32e-08,6;CL:0002425,7.32e-08,6;CL:0002436,7.32e-08,6;CL:0002427,7.32e-08,6;CL:0002428,7.32e-08,6;CL:0002429,7.32e-08,6;CL:0002433,7.32e-08,6;CL:0002431,7.32e-08,6;CL:0002432,7.32e-08,6;CL:0002320,5.48e-07,46;CL:0000134,5.48e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.48e-08!29;UBERON:0002370!1.15e-07!23;UBERON:0000974!1.15e-07!23;UBERON:0004807!1.15e-07!23;UBERON:0005058!1.15e-07!23;UBERON:0003351!1.15e-07!23;UBERON:0009113!1.15e-07!23;UBERON:0003295!1.15e-07!23;UBERON:0009722!1.15e-07!23;UBERON:0005562!1.15e-07!23;UBERON:0007690!1.15e-07!23;UBERON:0002193!1.51e-07!48;UBERON:0003408!1.66e-07!24;UBERON:0006562!6.15e-07!24;UBERON:0001557!6.15e-07!24;UBERON:0001042!6.15e-07!24;UBERON:0008814!6.15e-07!24;UBERON:0009145!6.15e-07!24;UBERON:0002390!7.73e-07!45;UBERON:0003061!7.73e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.88e-13,45;UBERON:0003061,1.88e-13,45;UBERON:0002193,2.47e-13,48;UBERON:0002405,2.47e-13,48;UBERON:0004177,1.91e-12,29;UBERON:0005057,1.91e-12,29;UBERON:0002370,2.73e-11,23;UBERON:0000974,2.73e-11,23;UBERON:0004807,2.73e-11,23;UBERON:0005058,2.73e-11,23;UBERON:0003351,2.73e-11,23;UBERON:0009113,2.73e-11,23;UBERON:0003295,2.73e-11,23;UBERON:0009722,2.73e-11,23;UBERON:0005562,2.73e-11,23;UBERON:0007690,2.73e-11,23;UBERON:0006562,1.43e-10,24;UBERON:0003408,1.43e-10,24;UBERON:0001557,1.43e-10,24;UBERON:0001042,1.43e-10,24;UBERON:0008814,1.43e-10,24;UBERON:0009145,1.43e-10,24;UBERON:0000077,4.89e-10,35;UBERON:0000153,1.20e-09,43;UBERON:0003081,3.76e-09,87;UBERON:0000072,9.34e-09,27;UBERON:0007811,1.30e-08,36;UBERON:0000926,3.19e-07,120;UBERON:0004120,3.19e-07,120;UBERON:0006603,3.19e-07,120;UBERON:0002384,5.48e-07,46 | |||
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| |||
|short_description=p7@BC016423 | |||
}} |
Revision as of 22:26, 5 August 2015
Short description: | p7@BC016423 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_BC016423_5end |
Coexpression cluster: | MCL_coexpression_mm9:266 |
Association with transcript: | 109bp_to_ENSMUST00000096069, ENSMUST00000110712, NM_134063, uc007pix.1, uc007piy.1_5end |
EntrezGene: | 105203 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.88e-13 | 45 |
blood island | 1.88e-13 | 45 |
hemolymphoid system | 2.47e-13 | 48 |
immune system | 2.47e-13 | 48 |
hemopoietic organ | 1.91e-12 | 29 |
immune organ | 1.91e-12 | 29 |
thymus | 2.73e-11 | 23 |
neck | 2.73e-11 | 23 |
respiratory system epithelium | 2.73e-11 | 23 |
hemolymphoid system gland | 2.73e-11 | 23 |
pharyngeal epithelium | 2.73e-11 | 23 |
thymic region | 2.73e-11 | 23 |
pharyngeal gland | 2.73e-11 | 23 |
entire pharyngeal arch endoderm | 2.73e-11 | 23 |
thymus primordium | 2.73e-11 | 23 |
early pharyngeal endoderm | 2.73e-11 | 23 |
pharynx | 1.43e-10 | 24 |
gland of gut | 1.43e-10 | 24 |
upper respiratory tract | 1.43e-10 | 24 |
chordate pharynx | 1.43e-10 | 24 |
pharyngeal arch system | 1.43e-10 | 24 |
pharyngeal region of foregut | 1.43e-10 | 24 |
mixed endoderm/mesoderm-derived structure | 4.89e-10 | 35 |
anterior region of body | 1.20e-09 | 43 |
lateral plate mesoderm | 3.76e-09 | 87 |
segment of respiratory tract | 9.34e-09 | 27 |
craniocervical region | 1.30e-08 | 36 |
mesoderm | 3.19e-07 | 120 |
mesoderm-derived structure | 3.19e-07 | 120 |
presumptive mesoderm | 3.19e-07 | 120 |
connective tissue | 5.48e-07 | 46 |