FFCP PHASE1:Mm9::chr11:59235122..59235138,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=315 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:59235122..59235138,- | |||
|description=CAGE_peak_at_chr11:59235122..59235138,- | |description=CAGE_peak_at_chr11:59235122..59235138,- | ||
|id=chr11:59235122..59235138,- | |id=chr11:59235122..59235138,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.90e-17,3;CL:0000068,1.06e-16,3;CL:0002202,1.06e-16,3;CL:0000069,1.06e-16,3;CL:0002632,1.06e-16,3;CL:0002368,1.06e-16,3;CL:0000307,1.06e-16,3;CL:0000377,1.06e-16,3;CL:0002076,8.64e-13,15;CL:0000223,1.75e-09,20;CL:0000066,1.72e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.32e-07!52;UBERON:0005068!7.32e-07!52;UBERON:0006241!7.32e-07!52;UBERON:0007135!7.32e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.06e-16,3;UBERON:0001005,1.06e-16,3;UBERON:0007196,1.06e-16,3;UBERON:0001558,1.06e-16,3;UBERON:0000072,8.94e-12,27;UBERON:0000065,1.98e-07,41;UBERON:0001004,3.14e-07,42 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,4.66667470644161,3.13439746966722,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.377690453926732,0.101376931219515,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,1.69422266034566,0.889294796111139,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.122490799214954,0.287536413054709,0,0,0.510749352340751,0.153606533256243,0.131886287730194,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.61119299110724,0,0.284743361598206,0,0,0,0,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,2.38602451609281,2.85764605063156,1.06001872353102,0,20.5322363862909,12.7402619853323,21.3320010945999,3.030874574157,3.29367825117628,3.0331466700887,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0,1.76922110389975,0.485300549842228,0.662524555381181,0.484875253135222,0,0.292780797011547,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0.101839363850316,0.870848794270651,0.505445516867349,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,1.50791283939272,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0.590603785761546,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62180172232131,1.02710957164827,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0,0,0,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.287177344778066,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.470546902076653,0.25384382367503,0.548783918618318,0,0.543216455383447,0,0.237270036248348,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0.927471342481686 | |phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,4.66667470644161,3.13439746966722,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.377690453926732,0.101376931219515,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,1.69422266034566,0.889294796111139,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.122490799214954,0.287536413054709,0,0,0.510749352340751,0.153606533256243,0.131886287730194,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.61119299110724,0,0.284743361598206,0,0,0,0,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,2.38602451609281,2.85764605063156,1.06001872353102,0,20.5322363862909,12.7402619853323,21.3320010945999,3.030874574157,3.29367825117628,3.0331466700887,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0,1.76922110389975,0.485300549842228,0.662524555381181,0.484875253135222,0,0.292780797011547,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0.101839363850316,0.870848794270651,0.505445516867349,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,1.50791283939272,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0.590603785761546,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62180172232131,1.02710957164827,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0,0,0,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.287177344778066,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.470546902076653,0.25384382367503,0.548783918618318,0,0.543216455383447,0,0.237270036248348,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0.927471342481686 | ||
|short_description=p@chr11:59235122..59235138,- | |short_description=p@chr11:59235122..59235138,- | ||
}} | }} |
Latest revision as of 04:43, 6 August 2015
Short description: | p@chr11:59235122..59235138, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:59235122..59235138, - |
Coexpression cluster: | MCL_coexpression_mm9:315 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.90e-17 | 3 |
duct epithelial cell | 1.06e-16 | 3 |
epithelial cell of tracheobronchial tree | 1.06e-16 | 3 |
branched duct epithelial cell | 1.06e-16 | 3 |
epithelial cell of lower respiratory tract | 1.06e-16 | 3 |
respiratory epithelial cell | 1.06e-16 | 3 |
tracheal epithelial cell | 1.06e-16 | 3 |
tracheoblast | 1.06e-16 | 3 |
endo-epithelial cell | 8.64e-13 | 15 |
endodermal cell | 1.75e-09 | 20 |
epithelial cell | 1.72e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.06e-16 | 3 |
respiratory airway | 1.06e-16 | 3 |
tracheobronchial tree | 1.06e-16 | 3 |
lower respiratory tract | 1.06e-16 | 3 |
segment of respiratory tract | 8.94e-12 | 27 |
respiratory tract | 1.98e-07 | 41 |
respiratory system | 3.14e-07 | 42 |