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FFCP PHASE1:Mm9::chr6:87776511..87776514,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=343
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr6:87776511..87776514,-
|description=CAGE_peak_at_chr6:87776511..87776514,-
|description=CAGE_peak_at_chr6:87776511..87776514,-
|id=chr6:87776511..87776514,-
|id=chr6:87776511..87776514,-
|ontology_enrichment_celltype=CL:0000542!1.38e-07!13;CL:0000051!1.38e-07!13;CL:0000838!1.39e-07!12;CL:0000084!6.75e-07!11;CL:0000827!6.75e-07!11
|ontology_enrichment_celltype=CL:0000542!1.38e-07!13;CL:0000051!1.38e-07!13;CL:0000838!1.39e-07!12;CL:0000084!6.75e-07!11;CL:0000827!6.75e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000838,2.55e-11,12;CL:0000791,8.50e-11,9;CL:0000789,8.50e-11,9;CL:0002420,8.50e-11,9;CL:0002419,8.50e-11,9;CL:0000790,8.50e-11,9;CL:0000542,3.48e-10,13;CL:0000051,3.48e-10,13;CL:0000084,4.19e-10,11;CL:0000827,4.19e-10,11;CL:0000624,1.46e-09,8;CL:0000893,3.88e-07,6;CL:0002489,3.88e-07,6;CL:0000898,3.88e-07,6;CL:0000809,3.88e-07,6;CL:0000810,3.88e-07,6;CL:0000895,3.88e-07,6;CL:0000808,3.88e-07,6;CL:0000894,3.88e-07,6;CL:0000806,3.88e-07,6;CL:0000807,3.88e-07,6;CL:0000805,3.88e-07,6;CL:0002425,3.88e-07,6;CL:0002436,3.88e-07,6;CL:0002427,3.88e-07,6;CL:0002428,3.88e-07,6;CL:0002429,3.88e-07,6;CL:0002433,3.88e-07,6;CL:0002431,3.88e-07,6;CL:0002432,3.88e-07,6;CL:0000738,5.09e-07,17;CL:0002087,5.09e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!3.24e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.75e-11,29;UBERON:0005057,6.75e-11,29;UBERON:0002370,2.22e-10,23;UBERON:0000974,2.22e-10,23;UBERON:0004807,2.22e-10,23;UBERON:0005058,2.22e-10,23;UBERON:0003351,2.22e-10,23;UBERON:0009113,2.22e-10,23;UBERON:0003295,2.22e-10,23;UBERON:0009722,2.22e-10,23;UBERON:0005562,2.22e-10,23;UBERON:0007690,2.22e-10,23;UBERON:0006562,9.78e-10,24;UBERON:0003408,9.78e-10,24;UBERON:0001557,9.78e-10,24;UBERON:0001042,9.78e-10,24;UBERON:0008814,9.78e-10,24;UBERON:0009145,9.78e-10,24;UBERON:0007811,2.18e-09,36;UBERON:0000077,7.48e-09,35;UBERON:0002390,3.06e-08,45;UBERON:0003061,3.06e-08,45;UBERON:0000065,3.81e-08,41;UBERON:0000072,4.17e-08,27;UBERON:0001004,8.41e-08,42;UBERON:0002193,2.62e-07,48;UBERON:0002405,2.62e-07,48;UBERON:0000949,2.68e-07,72;UBERON:0000153,7.32e-07,43
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0,2.45334314538995,2.39340827657833,1.87251621057595,3.08192342805909,2.07407613387875,1.19840510951844,1.31130603628496,0,0.809901069559304,0,1.73504190947031,1.23402990245165,2.54633791078818,0.510259740906419,0.794327609607082,1.30599894569468,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.612508068787107,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.485510353031154,1.1330713617802,0.405507724878058,0.183546752161682,0,0,0,0,0,0,6.71130424230945,11.6057942721815,6.04968838456435,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,1.5869729378161,0,0,0,0,0,0,0,0,0.311068836925433,0.945041568321835,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0,0,0,0.279182999001381,0,0,0.294628585473668,0.284743361598206,0.372798891650601,0.605809546665472,0.604572480854284,0.579728977403356,0,1.3599426674155,1.61910957491345,0,0,0.140444420131752,0,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,0.432982082022428,0.760079596425296,0,0.11418387971906,0,0.445326417194474,0.867426633830679,1.52232739156071,0.922461989024234,0.452167921657868,0.705532242814229,0,0,0.144599356919912,0.884610551949874,0.323533699894818,1.54589062922275,0.969750506270444,0,0,0.83778682725382,0.510914110417183,0.718890747035522,0,0.889491589511453,0.599162557619291,0.915001205637253,0.502617408451458,1.21677024134594,0.511430914660661,0.41557608911912,0.486723789203273,1.01839363850316,1.49288364732112,0.758168275301024,0.420883711772948,1.04096354370163,0.919608417733892,0.360124259610698,1.05493372485001,1.76894897793452,2.17793324484245,1.49922759295566,0.517406741478031,0,0.378212160335639,0.527853372491847,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,1.59227413454795,0,0,1.13665399758237,1.44988040774851,1.40715635988658,0.36012412292203,0,0.393528463494808,0.308534225774757,0.465067889500816,0.536546802799238,0.233530684734339,0.987359099480883,0.32833492815819,0.405344047729279,0.730999937126662,0,0.268412837520744,0.841159794256509,0.823236899034275,0.330418782983798,0.264450566663544,0.853153002140936,0.928946687441754,0.644337306610467,0.605050573870028,0.889512175379481,0.951128130562796,1.42358718463353,0.164698954724011,0.502670417600539,0.994782360205754,0.974820435595601,0.898819408654221,1.29682829924817,0.597423819763102,0.569003702859245,1.14248512609729,1.1270773567308,1.4255592949172,0.387904974335251,0.49095073923223,0.632365371242573,0.590440591918409,0.941992367048249,0.370191491765402,0.296452627087149,0.500535317148282,0.393117990226406,2.24862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.863088412352432,1.78348749452539,1.92192989231657,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0.717589654087649,0.482443521363367,0,0.568474235311454,0.814824882210129,1.01847051465113,1.17345124144251,0.167506257441816,0.476087281772027,0.195133647857799,0.630540576424764,1.10732344824387,0.318909537314974,1.63863314715738,1.38147985492716,1.73578870297814,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0.586058432961016,0,1.76729649043061,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0,1.21443210502468,0.876767573733936,0,0.321321316421807,0.425820255624806,0.178065603667255,0.651547837414304,0,1.32745138339963,0.485561272309963,0.302323556964751,1.32023555829129,0,0.614870295887855,0.516856586336442,1.45413491791002,1.06949213515416,0.632073515871632,2.10837217149998,0,1.70219802876894,1.08036656418786,0.776152102696527,0.857348140126369,0.886701168211368,1.24858172321449,0.987294123612726,0,0.23467170806371,0.42366414172764,0,0.16488625294148,1.29171541356724,0.361877549568935,0.954978752025092,1.31312719796049,0.582961673259701,0.741701208042039,0.512612642393558,0.619160603889667,0.555583582109135,2.44878994106098,2.05041341581538,1.14389086603261,3.0596117398894,2.37917468950219,1.52019971184866,0,0.632671987162271,0,0.86404272657441,0.836353184057875,0.436725127492355,0.809186078308924,0.743881101528023,0.523511883968059,0.259229946583586,0.621339313086926,0.56369293868419,0.897099276263873,0.827292452285488,0.777804753376191,0.516639293910924,0.506868376472335,0.821500670520278,0.651021924219751,0.629156066554265,1.20792060413003,1.72818003754719,0.632022241256357,1.21635129174099,1.02710957164827,1.16928740680016,0.716106782669926,0.79472541912506,1.9231271923195,2.06765338044408,1.51449674922221,1.37172251979,1.41156659191577,2.72882066071307,2.40529604100824,1.28564592399726,0,0.443971906748129,0.897138566094757,0,0.19318959403219,0.563047426353546,0.183151624267265,1.07184189539533,0.501572104035363,0,0,0.572895513439397,0.515559547031063,1.37016503954128,0,0.675022500231806,0.900642406448441,1.81256963593682,1.03552062350364,0.415149390336707,0.399024873401031,0.5122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|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0,2.45334314538995,2.39340827657833,1.87251621057595,3.08192342805909,2.07407613387875,1.19840510951844,1.31130603628496,0,0.809901069559304,0,1.73504190947031,1.23402990245165,2.54633791078818,0.510259740906419,0.794327609607082,1.30599894569468,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.612508068787107,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.485510353031154,1.1330713617802,0.405507724878058,0.183546752161682,0,0,0,0,0,0,6.71130424230945,11.6057942721815,6.04968838456435,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,1.5869729378161,0,0,0,0,0,0,0,0,0.311068836925433,0.945041568321835,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0,0,0,0.279182999001381,0,0,0.294628585473668,0.284743361598206,0.372798891650601,0.605809546665472,0.604572480854284,0.579728977403356,0,1.3599426674155,1.61910957491345,0,0,0.140444420131752,0,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,0.432982082022428,0.760079596425296,0,0.11418387971906,0,0.445326417194474,0.867426633830679,1.52232739156071,0.922461989024234,0.452167921657868,0.705532242814229,0,0,0.144599356919912,0.884610551949874,0.323533699894818,1.54589062922275,0.969750506270444,0,0,0.83778682725382,0.510914110417183,0.718890747035522,0,0.889491589511453,0.599162557619291,0.915001205637253,0.502617408451458,1.21677024134594,0.511430914660661,0.41557608911912,0.486723789203273,1.01839363850316,1.49288364732112,0.758168275301024,0.420883711772948,1.04096354370163,0.919608417733892,0.360124259610698,1.05493372485001,1.76894897793452,2.17793324484245,1.49922759295566,0.517406741478031,0,0.378212160335639,0.527853372491847,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,1.59227413454795,0,0,1.13665399758237,1.44988040774851,1.40715635988658,0.36012412292203,0,0.393528463494808,0.308534225774757,0.465067889500816,0.536546802799238,0.233530684734339,0.987359099480883,0.32833492815819,0.405344047729279,0.730999937126662,0,0.268412837520744,0.841159794256509,0.823236899034275,0.330418782983798,0.264450566663544,0.853153002140936,0.928946687441754,0.644337306610467,0.605050573870028,0.889512175379481,0.951128130562796,1.42358718463353,0.164698954724011,0.502670417600539,0.994782360205754,0.974820435595601,0.898819408654221,1.29682829924817,0.597423819763102,0.569003702859245,1.14248512609729,1.1270773567308,1.4255592949172,0.387904974335251,0.49095073923223,0.632365371242573,0.590440591918409,0.941992367048249,0.370191491765402,0.296452627087149,0.500535317148282,0.393117990226406,2.24862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.863088412352432,1.78348749452539,1.92192989231657,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0.717589654087649,0.482443521363367,0,0.568474235311454,0.814824882210129,1.01847051465113,1.17345124144251,0.167506257441816,0.476087281772027,0.195133647857799,0.630540576424764,1.10732344824387,0.318909537314974,1.63863314715738,1.38147985492716,1.73578870297814,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0.586058432961016,0,1.76729649043061,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0,1.21443210502468,0.876767573733936,0,0.321321316421807,0.425820255624806,0.178065603667255,0.651547837414304,0,1.32745138339963,0.485561272309963,0.302323556964751,1.32023555829129,0,0.614870295887855,0.516856586336442,1.45413491791002,1.06949213515416,0.632073515871632,2.10837217149998,0,1.70219802876894,1.08036656418786,0.776152102696527,0.857348140126369,0.886701168211368,1.24858172321449,0.987294123612726,0,0.23467170806371,0.42366414172764,0,0.16488625294148,1.29171541356724,0.361877549568935,0.954978752025092,1.31312719796049,0.582961673259701,0.741701208042039,0.512612642393558,0.619160603889667,0.555583582109135,2.44878994106098,2.05041341581538,1.14389086603261,3.0596117398894,2.37917468950219,1.52019971184866,0,0.632671987162271,0,0.86404272657441,0.836353184057875,0.436725127492355,0.809186078308924,0.743881101528023,0.523511883968059,0.259229946583586,0.621339313086926,0.56369293868419,0.897099276263873,0.827292452285488,0.777804753376191,0.516639293910924,0.506868376472335,0.821500670520278,0.651021924219751,0.629156066554265,1.20792060413003,1.72818003754719,0.632022241256357,1.21635129174099,1.02710957164827,1.16928740680016,0.716106782669926,0.79472541912506,1.9231271923195,2.06765338044408,1.51449674922221,1.37172251979,1.41156659191577,2.72882066071307,2.40529604100824,1.28564592399726,0,0.443971906748129,0.897138566094757,0,0.19318959403219,0.563047426353546,0.183151624267265,1.07184189539533,0.501572104035363,0,0,0.572895513439397,0.515559547031063,1.37016503954128,0,0.675022500231806,0.900642406448441,1.81256963593682,1.03552062350364,0.415149390336707,0.399024873401031,0.5122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|short_description=p@chr6:87776511..87776514,-
|short_description=p@chr6:87776511..87776514,-
}}
}}

Latest revision as of 06:35, 6 August 2015

Short description:p@chr6:87776511..87776514, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr6:87776511..87776514, -
Coexpression cluster:MCL_coexpression_mm9:343
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr6:87776511..87776514-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.71
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G72.41
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell2.55e-1112
mature alpha-beta T cell8.50e-119
alpha-beta T cell8.50e-119
immature T cell8.50e-119
mature T cell8.50e-119
immature alpha-beta T cell8.50e-119
lymphocyte3.48e-1013
common lymphoid progenitor3.48e-1013
T cell4.19e-1011
pro-T cell4.19e-1011
CD4-positive, alpha-beta T cell1.46e-098
thymocyte3.88e-076
double negative thymocyte3.88e-076
naive T cell3.88e-076
double-positive, alpha-beta thymocyte3.88e-076
CD4-positive, alpha-beta thymocyte3.88e-076
naive thymus-derived CD4-positive, alpha-beta T cell3.88e-076
DN4 thymocyte3.88e-076
DN1 thymic pro-T cell3.88e-076
DN2 thymocyte3.88e-076
DN3 thymocyte3.88e-076
immature single positive thymocyte3.88e-076
early T lineage precursor3.88e-076
mature CD4 single-positive thymocyte3.88e-076
resting double-positive thymocyte3.88e-076
double-positive blast3.88e-076
CD69-positive double-positive thymocyte3.88e-076
CD69-positive, CD4-positive single-positive thymocyte3.88e-076
CD4-positive, CD8-intermediate double-positive thymocyte3.88e-076
CD24-positive, CD4 single-positive thymocyte3.88e-076
leukocyte5.09e-0717
nongranular leukocyte5.09e-0717

Uber anatomy
Ontology termp-valuen
hemopoietic organ6.75e-1129
immune organ6.75e-1129
thymus2.22e-1023
neck2.22e-1023
respiratory system epithelium2.22e-1023
hemolymphoid system gland2.22e-1023
pharyngeal epithelium2.22e-1023
thymic region2.22e-1023
pharyngeal gland2.22e-1023
entire pharyngeal arch endoderm2.22e-1023
thymus primordium2.22e-1023
early pharyngeal endoderm2.22e-1023
pharynx9.78e-1024
gland of gut9.78e-1024
upper respiratory tract9.78e-1024
chordate pharynx9.78e-1024
pharyngeal arch system9.78e-1024
pharyngeal region of foregut9.78e-1024
craniocervical region2.18e-0936
mixed endoderm/mesoderm-derived structure7.48e-0935
hematopoietic system3.06e-0845
blood island3.06e-0845
respiratory tract3.81e-0841
segment of respiratory tract4.17e-0827
respiratory system8.41e-0842
hemolymphoid system2.62e-0748
immune system2.62e-0748
endocrine system2.68e-0772
anterior region of body7.32e-0743
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