FFCP PHASE1:Mm9::chrX:39413565..39413576,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=207 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:39413565..39413576,+ | |||
|description=CAGE_peak_at_chrX:39413565..39413576,+ | |description=CAGE_peak_at_chrX:39413565..39413576,+ | ||
|id=chrX:39413565..39413576,+ | |id=chrX:39413565..39413576,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.83e-13,5;CL:0000066,4.35e-13,25;CL:0000223,1.89e-09,20;CL:0000682,1.56e-08,3;CL:0000239,1.20e-07,6;CL:0000677,1.20e-07,6;CL:0000584,1.20e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.63e-12!130;UBERON:0000925!1.63e-12!130;UBERON:0006595!1.63e-12!130;UBERON:0001007!1.73e-11!128;UBERON:0001555!1.73e-11!128;UBERON:0007026!1.73e-11!128;UBERON:0004921!1.53e-10!126;UBERON:0004185!1.53e-10!126;UBERON:0000344!3.66e-10!15;UBERON:0000160!1.16e-09!43;UBERON:0004923!2.06e-09!24;UBERON:0001242!7.11e-09!13;UBERON:0000060!7.11e-09!13;UBERON:0001262!7.11e-09!13;UBERON:0004786!7.11e-09!13;UBERON:0009854!8.28e-09!23;UBERON:0009856!8.28e-09!23;UBERON:0002365!1.73e-08!25;UBERON:0002330!1.73e-08!25;UBERON:0005409!2.48e-08!59;UBERON:0002107!3.83e-08!22;UBERON:0007499!3.83e-08!22;UBERON:0006925!3.83e-08!22;UBERON:0009497!3.83e-08!22;UBERON:0000015!3.83e-08!22;UBERON:0002423!3.83e-08!22;UBERON:0006235!3.83e-08!22;UBERON:0008835!3.83e-08!22;UBERON:0003894!3.83e-08!22;UBERON:0004161!3.83e-08!22;UBERON:0008836!3.83e-08!22;UBERON:0009569!1.46e-07!66;UBERON:0003914!3.28e-07!47;UBERON:0005911!4.68e-07!69 | |ontology_enrichment_uberon=UBERON:0004119!1.63e-12!130;UBERON:0000925!1.63e-12!130;UBERON:0006595!1.63e-12!130;UBERON:0001007!1.73e-11!128;UBERON:0001555!1.73e-11!128;UBERON:0007026!1.73e-11!128;UBERON:0004921!1.53e-10!126;UBERON:0004185!1.53e-10!126;UBERON:0000344!3.66e-10!15;UBERON:0000160!1.16e-09!43;UBERON:0004923!2.06e-09!24;UBERON:0001242!7.11e-09!13;UBERON:0000060!7.11e-09!13;UBERON:0001262!7.11e-09!13;UBERON:0004786!7.11e-09!13;UBERON:0009854!8.28e-09!23;UBERON:0009856!8.28e-09!23;UBERON:0002365!1.73e-08!25;UBERON:0002330!1.73e-08!25;UBERON:0005409!2.48e-08!59;UBERON:0002107!3.83e-08!22;UBERON:0007499!3.83e-08!22;UBERON:0006925!3.83e-08!22;UBERON:0009497!3.83e-08!22;UBERON:0000015!3.83e-08!22;UBERON:0002423!3.83e-08!22;UBERON:0006235!3.83e-08!22;UBERON:0008835!3.83e-08!22;UBERON:0003894!3.83e-08!22;UBERON:0004161!3.83e-08!22;UBERON:0008836!3.83e-08!22;UBERON:0009569!1.46e-07!66;UBERON:0003914!3.28e-07!47;UBERON:0005911!4.68e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.81e-15,23;UBERON:0009856,1.81e-15,23;UBERON:0000160,2.14e-15,31;UBERON:0004119,5.30e-14,118;UBERON:0000925,5.30e-14,118;UBERON:0006595,5.30e-14,118;UBERON:0002107,7.62e-14,22;UBERON:0007499,7.62e-14,22;UBERON:0006925,7.62e-14,22;UBERON:0009497,7.62e-14,22;UBERON:0000015,7.62e-14,22;UBERON:0002423,7.62e-14,22;UBERON:0006235,7.62e-14,22;UBERON:0008835,7.62e-14,22;UBERON:0003894,7.62e-14,22;UBERON:0004161,7.62e-14,22;UBERON:0008836,7.62e-14,22;UBERON:0000344,8.86e-13,15;UBERON:0001242,3.40e-12,13;UBERON:0001262,3.40e-12,13;UBERON:0004786,3.40e-12,13;UBERON:0001007,4.01e-12,116;UBERON:0001555,4.01e-12,116;UBERON:0007026,4.01e-12,116;UBERON:0002365,7.11e-12,25;UBERON:0002330,7.11e-12,25;UBERON:0004921,2.07e-11,114;UBERON:0004923,9.68e-11,24;UBERON:0005409,2.13e-10,47;UBERON:0002108,2.32e-10,4;UBERON:0000331,1.75e-08,3;UBERON:0002116,1.75e-08,3;UBERON:0001204,1.75e-08,3;UBERON:0001168,1.75e-08,3;UBERON:0003929,2.46e-08,55 | |||
|phase1_expression=0,14.6569671208532,6.82498859084304,6.35174843744343,8.5152274090879,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,1.11994695955385,0.91763712426868,8.6134794617253,3.01533397311352,4.95583835177545,6.65081968097309,10.5852654499171,1.77384408524244,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95674772884027,7.74381489283248,6.11974200336975,9.17495425784289,3.89865850468601,3.13618820968135,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,0,0,0,0,0,0,0.502666365318702,0.988779870937496,0.722996784599558,0,0.485300549842228,0,0.484875253135222,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0.465067889500816,0.268273401399619,0.233530684734339,0,0.32833492815819,0.486412857275134,1.02339991197733,0.439100230582101,0.805238512562231,0,0,6.27795687669216,1.85115396664481,0,0.232236671860439,0.128867461322093,0,0.889512175379481,0.380451252225118,2.37264530772256,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,4.32276099749388,3.38540164532424,0,0.228497025219458,0,0,0,0.140271639780637,0.379419222745544,0.295220295959204,0.31399745568275,0.246794327843601,4.15033677922008,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0,0.274561413188081,1.43768206527355,0.744281895337007,1.24815069245824,1.51547326768267,2.15276896226295,1.92977408545347,0.554259570499814,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0.315270288212382,0.44292937929755,0.637819074629948,0.983179888294428,0.690739927463582,0.578596234326046,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,1.64270195644597,1.48282449604674,0,0,0.161464426695906,0.180938774784468,0,0,1.7488850197791,0,0.170870880797853,0,0,0.565105371014073,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.247960367176008,0.26175594198403,3.24037433229482,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,1.84673078000486,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.402048282689293,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.543216455383447,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,14.6569671208532,6.82498859084304,6.35174843744343,8.5152274090879,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,1.11994695955385,0.91763712426868,8.6134794617253,3.01533397311352,4.95583835177545,6.65081968097309,10.5852654499171,1.77384408524244,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95674772884027,7.74381489283248,6.11974200336975,9.17495425784289,3.89865850468601,3.13618820968135,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,0,0,0,0,0,0,0.502666365318702,0.988779870937496,0.722996784599558,0,0.485300549842228,0,0.484875253135222,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0.465067889500816,0.268273401399619,0.233530684734339,0,0.32833492815819,0.486412857275134,1.02339991197733,0.439100230582101,0.805238512562231,0,0,6.27795687669216,1.85115396664481,0,0.232236671860439,0.128867461322093,0,0.889512175379481,0.380451252225118,2.37264530772256,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,4.32276099749388,3.38540164532424,0,0.228497025219458,0,0,0,0.140271639780637,0.379419222745544,0.295220295959204,0.31399745568275,0.246794327843601,4.15033677922008,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0,0.274561413188081,1.43768206527355,0.744281895337007,1.24815069245824,1.51547326768267,2.15276896226295,1.92977408545347,0.554259570499814,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0.315270288212382,0.44292937929755,0.637819074629948,0.983179888294428,0.690739927463582,0.578596234326046,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,1.64270195644597,1.48282449604674,0,0,0.161464426695906,0.180938774784468,0,0,1.7488850197791,0,0.170870880797853,0,0,0.565105371014073,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.247960367176008,0.26175594198403,3.24037433229482,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,1.84673078000486,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.402048282689293,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.543216455383447,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chrX:39413565..39413576,+ | |short_description=p@chrX:39413565..39413576,+ | ||
}} | }} |
Latest revision as of 06:51, 6 August 2015
Short description: | p@chrX:39413565..39413576, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:39413565..39413576, + |
Coexpression cluster: | MCL_coexpression_mm9:207 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.83e-13 | 5 |
epithelial cell | 4.35e-13 | 25 |
endodermal cell | 1.89e-09 | 20 |
M cell of gut | 1.56e-08 | 3 |
brush border epithelial cell | 1.20e-07 | 6 |
gut absorptive cell | 1.20e-07 | 6 |
enterocyte | 1.20e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.81e-15 | 23 |
sac | 1.81e-15 | 23 |
intestine | 2.14e-15 | 31 |
endoderm-derived structure | 5.30e-14 | 118 |
endoderm | 5.30e-14 | 118 |
presumptive endoderm | 5.30e-14 | 118 |
liver | 7.62e-14 | 22 |
epithelial sac | 7.62e-14 | 22 |
digestive gland | 7.62e-14 | 22 |
epithelium of foregut-midgut junction | 7.62e-14 | 22 |
anatomical boundary | 7.62e-14 | 22 |
hepatobiliary system | 7.62e-14 | 22 |
foregut-midgut junction | 7.62e-14 | 22 |
hepatic diverticulum | 7.62e-14 | 22 |
liver primordium | 7.62e-14 | 22 |
septum transversum | 7.62e-14 | 22 |
liver bud | 7.62e-14 | 22 |
mucosa | 8.86e-13 | 15 |
intestinal mucosa | 3.40e-12 | 13 |
wall of intestine | 3.40e-12 | 13 |
gastrointestinal system mucosa | 3.40e-12 | 13 |
digestive system | 4.01e-12 | 116 |
digestive tract | 4.01e-12 | 116 |
primitive gut | 4.01e-12 | 116 |
exocrine gland | 7.11e-12 | 25 |
exocrine system | 7.11e-12 | 25 |
subdivision of digestive tract | 2.07e-11 | 114 |
organ component layer | 9.68e-11 | 24 |
gastrointestinal system | 2.13e-10 | 47 |
small intestine | 2.32e-10 | 4 |
ileal mucosa | 1.75e-08 | 3 |
ileum | 1.75e-08 | 3 |
mucosa of small intestine | 1.75e-08 | 3 |
wall of small intestine | 1.75e-08 | 3 |
gut epithelium | 2.46e-08 | 55 |