FFCP PHASE1:Mm9::chr11:66865244..66865277,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:66865244..66865277,-|id=chr11:66865244..66865277,-|ontology_enrichment_celltype=CL:0002563!1.88e-09!9;CL:0002251!1.88e-09!9;CL:0000239!2.91e-09!6;CL:0000677!2.91e-09!6;CL:0000212!2.91e-09!6;CL:0000584!2.91e-09!6;CL:0000066!3.04e-08!25;CL:0000075!9.31e-08!7|ontology_enrichment_celltype_v019_2=CL:0000239,2.24e-18,6;CL:0000677,2.24e-18,6;CL:0000584,2.24e-18,6;CL:0000075,1.15e-15,7;CL:0000066,4.47e-15,25;CL:0002563,4.82e-12,9;CL:0002251,4.82e-12,9;CL:0000223,1.08e-10,20;CL:0000682,7.99e-10,3;CL:0002076,5.79e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.60e-17!15;UBERON:0001242!1.20e-14!13;UBERON:0000060!1.20e-14!13;UBERON:0001262!1.20e-14!13;UBERON:0004786!1.20e-14!13;UBERON:0004923!1.06e-13!24;UBERON:0000160!4.16e-13!43;UBERON:0005409!3.30e-12!59;UBERON:0003350!1.88e-09!9;UBERON:0004808!1.88e-09!9;UBERON:0001277!1.88e-09!9;UBERON:0004119!5.02e-08!130;UBERON:0000925!5.02e-08!130;UBERON:0006595!5.02e-08!130;UBERON:0000485!2.22e-07!11;UBERON:0001007!4.41e-07!128;UBERON:0001555!4.41e-07!128;UBERON:0007026!4.41e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.22e-29,31;UBERON:0000344,6.61e-28,15;UBERON:0001242,1.35e-22,13;UBERON:0001262,1.35e-22,13;UBERON:0004786,1.35e-22,13;UBERON:0005409,2.38e-22,47;UBERON:0004923,1.60e-16,24;UBERON:0001007,7.67e-13,116;UBERON:0001555,7.67e-13,116;UBERON:0007026,7.67e-13,116;UBERON:0004119,1.55e-12,118;UBERON:0000925,1.55e-12,118;UBERON:0006595,1.55e-12,118;UBERON:0002108,2.20e-12,4;UBERON:0003350,4.82e-12,9;UBERON:0004808,4.82e-12,9;UBERON:0001277,4.82e-12,9;UBERON:0004921,1.18e-10,114;UBERON:0000331,6.06e-10,3;UBERON:0002116,6.06e-10,3;UBERON:0001204,6.06e-10,3;UBERON:0001168,6.06e-10,3;UBERON:0000485,9.79e-10,11;UBERON:0001155,3.15e-07,2;UBERON:0000059,3.15e-07,2;UBERON:0001962,4.79e-07,2;UBERON:0001961,4.79e-07,2;UBERON:0001744,4.79e-07,2|phase1_expression=0,16.7508195666893,15.4699741392442,26.9193148063079,27.0483694171027,1.17515490338323,1.40167584357315,0.258246646883153,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,7.1996590257033,7.79991555628378,10.9104073181854,8.18447792702242,6.24866574789078,16.3420140732482,12.0974462284767,3.32595765982957,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,3.39985666853875,1.07940638327563,0,2.68816132258401,0.702222100658759,0,0,0,0,0,0,0,0,0,0,5.82337786567206,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.161766849947409,0,0,7.45567044872489,0.292780797011547,0,14.3055950916811,0,0,0,0,0,0,0,0.255715457330331,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,70.7096195585328,10.0491215332147,0,0,0.128867461322093,0,0,0,6.64340686162316,0.329397909448022,0,0.198956472041151,0.19496408711912,7.19055526923377,14.9135254413539,20.3124098719455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0.161464426695906,0,0,0,3.20628920292836,0.18542530201051,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.523511883968059,6.09190374471426,0,0,0,0,0,0,0,0.117357238645754,0,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr11:66865244..66865277,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:66865244..66865277,- | |||
|description=CAGE_peak_at_chr11:66865244..66865277,- | |||
|id=chr11:66865244..66865277,- | |||
|ontology_enrichment_celltype=CL:0002563!1.88e-09!9;CL:0002251!1.88e-09!9;CL:0000239!2.91e-09!6;CL:0000677!2.91e-09!6;CL:0000212!2.91e-09!6;CL:0000584!2.91e-09!6;CL:0000066!3.04e-08!25;CL:0000075!9.31e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.24e-18,6;CL:0000677,2.24e-18,6;CL:0000584,2.24e-18,6;CL:0000075,1.15e-15,7;CL:0000066,4.47e-15,25;CL:0002563,4.82e-12,9;CL:0002251,4.82e-12,9;CL:0000223,1.08e-10,20;CL:0000682,7.99e-10,3;CL:0002076,5.79e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.60e-17!15;UBERON:0001242!1.20e-14!13;UBERON:0000060!1.20e-14!13;UBERON:0001262!1.20e-14!13;UBERON:0004786!1.20e-14!13;UBERON:0004923!1.06e-13!24;UBERON:0000160!4.16e-13!43;UBERON:0005409!3.30e-12!59;UBERON:0003350!1.88e-09!9;UBERON:0004808!1.88e-09!9;UBERON:0001277!1.88e-09!9;UBERON:0004119!5.02e-08!130;UBERON:0000925!5.02e-08!130;UBERON:0006595!5.02e-08!130;UBERON:0000485!2.22e-07!11;UBERON:0001007!4.41e-07!128;UBERON:0001555!4.41e-07!128;UBERON:0007026!4.41e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.22e-29,31;UBERON:0000344,6.61e-28,15;UBERON:0001242,1.35e-22,13;UBERON:0001262,1.35e-22,13;UBERON:0004786,1.35e-22,13;UBERON:0005409,2.38e-22,47;UBERON:0004923,1.60e-16,24;UBERON:0001007,7.67e-13,116;UBERON:0001555,7.67e-13,116;UBERON:0007026,7.67e-13,116;UBERON:0004119,1.55e-12,118;UBERON:0000925,1.55e-12,118;UBERON:0006595,1.55e-12,118;UBERON:0002108,2.20e-12,4;UBERON:0003350,4.82e-12,9;UBERON:0004808,4.82e-12,9;UBERON:0001277,4.82e-12,9;UBERON:0004921,1.18e-10,114;UBERON:0000331,6.06e-10,3;UBERON:0002116,6.06e-10,3;UBERON:0001204,6.06e-10,3;UBERON:0001168,6.06e-10,3;UBERON:0000485,9.79e-10,11;UBERON:0001155,3.15e-07,2;UBERON:0000059,3.15e-07,2;UBERON:0001962,4.79e-07,2;UBERON:0001961,4.79e-07,2;UBERON:0001744,4.79e-07,2 | |||
|phase1_expression=0,16.7508195666893,15.4699741392442,26.9193148063079,27.0483694171027,1.17515490338323,1.40167584357315,0.258246646883153,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,7.1996590257033,7.79991555628378,10.9104073181854,8.18447792702242,6.24866574789078,16.3420140732482,12.0974462284767,3.32595765982957,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,3.39985666853875,1.07940638327563,0,2.68816132258401,0.702222100658759,0,0,0,0,0,0,0,0,0,0,5.82337786567206,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.161766849947409,0,0,7.45567044872489,0.292780797011547,0,14.3055950916811,0,0,0,0,0,0,0,0.255715457330331,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,70.7096195585328,10.0491215332147,0,0,0.128867461322093,0,0,0,6.64340686162316,0.329397909448022,0,0.198956472041151,0.19496408711912,7.19055526923377,14.9135254413539,20.3124098719455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0.161464426695906,0,0,0,3.20628920292836,0.18542530201051,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.523511883968059,6.09190374471426,0,0,0,0,0,0,0,0.117357238645754,0,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr11:66865244..66865277,- | |||
}} |
Latest revision as of 07:56, 6 August 2015
Short description: | p@chr11:66865244..66865277, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:66865244..66865277, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.24e-18 | 6 |
gut absorptive cell | 2.24e-18 | 6 |
enterocyte | 2.24e-18 | 6 |
columnar/cuboidal epithelial cell | 1.15e-15 | 7 |
epithelial cell | 4.47e-15 | 25 |
intestinal epithelial cell | 4.82e-12 | 9 |
epithelial cell of alimentary canal | 4.82e-12 | 9 |
endodermal cell | 1.08e-10 | 20 |
M cell of gut | 7.99e-10 | 3 |
endo-epithelial cell | 5.79e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.22e-29 | 31 |
mucosa | 6.61e-28 | 15 |
intestinal mucosa | 1.35e-22 | 13 |
wall of intestine | 1.35e-22 | 13 |
gastrointestinal system mucosa | 1.35e-22 | 13 |
gastrointestinal system | 2.38e-22 | 47 |
organ component layer | 1.60e-16 | 24 |
digestive system | 7.67e-13 | 116 |
digestive tract | 7.67e-13 | 116 |
primitive gut | 7.67e-13 | 116 |
endoderm-derived structure | 1.55e-12 | 118 |
endoderm | 1.55e-12 | 118 |
presumptive endoderm | 1.55e-12 | 118 |
small intestine | 2.20e-12 | 4 |
epithelium of mucosa | 4.82e-12 | 9 |
gastrointestinal system epithelium | 4.82e-12 | 9 |
intestinal epithelium | 4.82e-12 | 9 |
subdivision of digestive tract | 1.18e-10 | 114 |
ileal mucosa | 6.06e-10 | 3 |
ileum | 6.06e-10 | 3 |
mucosa of small intestine | 6.06e-10 | 3 |
wall of small intestine | 6.06e-10 | 3 |
simple columnar epithelium | 9.79e-10 | 11 |
colon | 3.15e-07 | 2 |
large intestine | 3.15e-07 | 2 |
gut-associated lymphoid tissue | 4.79e-07 | 2 |
mucosa-associated lymphoid tissue | 4.79e-07 | 2 |
lymphoid tissue | 4.79e-07 | 2 |