FFCP PHASE1:Hg19::chr11:116700600..116700613,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=345 | |EntrezGene=345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=610 | |HGNC=610 | ||
|TSSclassifier=strong | |||
|UniProt=P02656 | |UniProt=P02656 | ||
|association_with_transcript=0bp_to_ENST00000227667_5end | |association_with_transcript=0bp_to_ENST00000227667_5end | ||
|cluster_id=chr11:116700600..116700613,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_APOC3_5end | |description=CAGE_peak_2_at_APOC3_5end | ||
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|ontology_enrichment_celltype=CL:0000181!6.13e-18!12;CL:0000417!6.13e-18!12;CL:0000668!6.13e-18!12;CL:0000414!6.13e-18!12;CL:0000412!6.13e-18!12;CL:0000182!6.13e-18!12;CL:0002602!1.60e-07!2 | |ontology_enrichment_celltype=CL:0000181!6.13e-18!12;CL:0000417!6.13e-18!12;CL:0000668!6.13e-18!12;CL:0000414!6.13e-18!12;CL:0000412!6.13e-18!12;CL:0000182!6.13e-18!12;CL:0002602!1.60e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.91e-27;12!CL:0002563;9.64e-08;4 | |ontology_enrichment_celltype_v019=CL:0000182;2.91e-27;12!CL:0002563;9.64e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.02e-27,12;CL:0000223,4.45e-10,58;CL:0002563,9.64e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.71e-22;11!UBERON:0009497;1.86e-18;13!UBERON:0003104;5.78e-13;31!UBERON:0001041;1.08e-07;30!UBERON:0005425;1.10e-07;1!CL:0000223;6.46e-07;58 | |ontology_enrichment_development_v019=UBERON:0004161;6.71e-22;11!UBERON:0009497;1.86e-18;13!UBERON:0003104;5.78e-13;31!UBERON:0001041;1.08e-07;30!UBERON:0005425;1.10e-07;1!CL:0000223;6.46e-07;58 | ||
|ontology_enrichment_disease=DOID:114!2.15e-07!2 | |ontology_enrichment_disease=DOID:114!2.15e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;5.07e-28;19!UBERON:0006925;5.07e-28;19!UBERON:0002423;5.91e-21;25!UBERON:0000160;1.53e-17;17!UBERON:0005409;1.74e-17;22!UBERON:0002365;3.83e-16;31!UBERON:0002330;3.83e-16;31!UBERON:0002368;3.67e-14;33!UBERON:0002108;8.16e-13;4!UBERON:0001007;1.72e-11;81!UBERON:0004921;8.18e-11;33!UBERON:0000949;3.63e-10;43!UBERON:0005172;8.65e-09;52!UBERON:0005173;8.65e-09;52!UBERON:0002417;5.84e-08;58!UBERON:0000916;5.84e-08;58!UBERON:0001242;9.64e-08;4!UBERON:0001262;9.64e-08;4!UBERON:0004786;9.64e-08;4!UBERON:0004808;9.64e-08;4!UBERON:0001277;9.64e-08;4!UBERON:0000941;1.10e-07;1!UBERON:0001785;1.10e-07;1!UBERON:0002464;1.10e-07;1!UBERON:0004904;1.10e-07;1!UBERON:0001021;1.10e-07;1!UBERON:0001155;3.39e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002107;5.07e-28;19!UBERON:0006925;5.07e-28;19!UBERON:0002423;5.91e-21;25!UBERON:0000160;1.53e-17;17!UBERON:0005409;1.74e-17;22!UBERON:0002365;3.83e-16;31!UBERON:0002330;3.83e-16;31!UBERON:0002368;3.67e-14;33!UBERON:0002108;8.16e-13;4!UBERON:0001007;1.72e-11;81!UBERON:0004921;8.18e-11;33!UBERON:0000949;3.63e-10;43!UBERON:0005172;8.65e-09;52!UBERON:0005173;8.65e-09;52!UBERON:0002417;5.84e-08;58!UBERON:0000916;5.84e-08;58!UBERON:0001242;9.64e-08;4!UBERON:0001262;9.64e-08;4!UBERON:0004786;9.64e-08;4!UBERON:0004808;9.64e-08;4!UBERON:0001277;9.64e-08;4!UBERON:0000941;1.10e-07;1!UBERON:0001785;1.10e-07;1!UBERON:0002464;1.10e-07;1!UBERON:0004904;1.10e-07;1!UBERON:0001021;1.10e-07;1!UBERON:0001155;3.39e-07;9 | ||
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|short_description=p2@APOC3 | |short_description=p2@APOC3 | ||
}} | }} |
Latest revision as of 19:26, 15 September 2015
Short description: | p2@APOC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APOC3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000227667_5end |
EntrezGene: | APOC3 |
HGNC: | 610 |
UniProt: | P02656 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.02e-27 | 12 |
endodermal cell | 4.45e-10 | 58 |
intestinal epithelial cell | 9.64e-08 | 4 |