FFCP PHASE1:Hg19::chr12:102271436..102271486,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55332 | |EntrezGene=55332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25645 | |HGNC=25645 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z4T0 | |UniProt=B7Z4T0 | ||
|association_with_transcript=0bp_to_ENST00000544152,ENST00000551403_5end | |association_with_transcript=0bp_to_ENST00000544152,ENST00000551403_5end | ||
|cluster_id=chr12:102271436..102271486,+ | |||
|coexpression_cluster_id=C809 | |||
|description=CAGE_peak_1_at_DRAM1_5end | |description=CAGE_peak_1_at_DRAM1_5end | ||
|id=chr12:102271436..102271486,+ | |id=chr12:102271436..102271486,+ | ||
|ontology_enrichment_celltype=CL:0002194!4.35e-19!63;CL:0000576!4.35e-19!63;CL:0000040!4.35e-19!63;CL:0000559!4.35e-19!63;CL:0000144!4.57e-19!625;CL:0000766!1.69e-18!76;CL:0002057!2.08e-18!42;CL:0002009!1.21e-17!65;CL:0000012!1.39e-17!682;CL:0000860!1.42e-17!45;CL:0000839!1.70e-17!70;CL:0000548!3.27e-17!679;CL:0000004!3.27e-17!679;CL:0000255!3.27e-17!679;CL:0000557!5.06e-17!71;CL:0002371!3.86e-16!591;CL:0000048!3.83e-14!430;CL:0000723!2.23e-13!436;CL:0000222!5.39e-13!119;CL:0000034!1.47e-12!444;CL:0000063!1.15e-11!578;CL:0000003!4.27e-10!722;CL:0000134!7.99e-09!358;CL:0000192!1.39e-08!42;CL:0000514!1.39e-08!42;CL:0002320!3.63e-08!365;CL:0000213!1.83e-07!57;CL:0000215!1.83e-07!57;CL:0000359!1.87e-07!32;CL:0000057!2.85e-07!75;CL:0000763!3.95e-07!112;CL:0000049!3.95e-07!112;CL:0000055!8.02e-07!180 | |ontology_enrichment_celltype=CL:0002194!4.35e-19!63;CL:0000576!4.35e-19!63;CL:0000040!4.35e-19!63;CL:0000559!4.35e-19!63;CL:0000144!4.57e-19!625;CL:0000766!1.69e-18!76;CL:0002057!2.08e-18!42;CL:0002009!1.21e-17!65;CL:0000012!1.39e-17!682;CL:0000860!1.42e-17!45;CL:0000839!1.70e-17!70;CL:0000548!3.27e-17!679;CL:0000004!3.27e-17!679;CL:0000255!3.27e-17!679;CL:0000557!5.06e-17!71;CL:0002371!3.86e-16!591;CL:0000048!3.83e-14!430;CL:0000723!2.23e-13!436;CL:0000222!5.39e-13!119;CL:0000034!1.47e-12!444;CL:0000063!1.15e-11!578;CL:0000003!4.27e-10!722;CL:0000134!7.99e-09!358;CL:0000192!1.39e-08!42;CL:0000514!1.39e-08!42;CL:0002320!3.63e-08!365;CL:0000213!1.83e-07!57;CL:0000215!1.83e-07!57;CL:0000359!1.87e-07!32;CL:0000057!2.85e-07!75;CL:0000763!3.95e-07!112;CL:0000049!3.95e-07!112;CL:0000055!8.02e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.69e-17;39!CL:0000234;2.69e-17;39!CL:0000860;8.03e-17;33!CL:0002057;8.03e-17;33!CL:0000576;3.15e-11;48!CL:0000766;9.20e-10;69!CL:0000359;3.50e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.37e-22,48;CL:0000234,3.37e-22,48;CL:0002194,3.62e-19,59;CL:0000576,3.62e-19,59;CL:0000040,3.62e-19,59;CL:0000559,3.62e-19,59;CL:0000860,1.83e-18,42;CL:0002057,1.83e-18,42;CL:0000766,1.89e-18,72;CL:0002009,1.18e-17,61;CL:0000839,1.83e-17,66;CL:0000557,5.70e-17,67;CL:0000048,2.00e-14,427;CL:0000723,1.00e-13,433;CL:0000222,3.17e-13,121;CL:0000034,7.62e-13,441;CL:0000134,6.76e-09,354;CL:0000192,1.16e-08,43;CL:0000514,1.16e-08,43;CL:0002320,3.45e-08,361;CL:0000057,9.22e-08,76;CL:0000213,1.42e-07,58;CL:0000215,1.42e-07,58;CL:0000359,1.79e-07,32;CL:0000763,7.87e-07,108;CL:0000049,7.87e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.52e-14;42 | |||
|ontology_enrichment_disease=DOID:2394!8.25e-07!14 | |ontology_enrichment_disease=DOID:2394!8.25e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.50e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.91e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003081!4.12e-21!216;UBERON:0000926!1.04e-20!448;UBERON:0004120!1.04e-20!448;UBERON:0006603!1.04e-20!448;UBERON:0002204!4.49e-20!167;UBERON:0002193!5.25e-18!112;UBERON:0002371!3.71e-17!80;UBERON:0002405!6.38e-16!115;UBERON:0002390!1.28e-15!102;UBERON:0003061!1.28e-15!102;UBERON:0004765!1.05e-14!101;UBERON:0001434!1.05e-14!101;UBERON:0001474!1.51e-13!86;UBERON:0000055!5.16e-09!69;UBERON:0000480!1.24e-08!626;UBERON:0004535!1.48e-08!110;UBERON:0000467!1.49e-08!625;UBERON:0001009!5.02e-08!113;UBERON:0002384!8.68e-08!375;UBERON:0002049!1.33e-07!79;UBERON:0007798!1.33e-07!79;UBERON:0000468!1.83e-07!659;UBERON:0001637!2.17e-07!42;UBERON:0003509!2.17e-07!42;UBERON:0004572!2.17e-07!42;UBERON:0004573!3.53e-07!33;UBERON:0004571!3.53e-07!33;UBERON:0004872!4.73e-07!84;UBERON:0001981!5.72e-07!60;UBERON:0007500!5.72e-07!60;UBERON:0004537!5.72e-07!60;UBERON:0006965!5.72e-07!60 | |ontology_enrichment_uberon=UBERON:0003081!4.12e-21!216;UBERON:0000926!1.04e-20!448;UBERON:0004120!1.04e-20!448;UBERON:0006603!1.04e-20!448;UBERON:0002204!4.49e-20!167;UBERON:0002193!5.25e-18!112;UBERON:0002371!3.71e-17!80;UBERON:0002405!6.38e-16!115;UBERON:0002390!1.28e-15!102;UBERON:0003061!1.28e-15!102;UBERON:0004765!1.05e-14!101;UBERON:0001434!1.05e-14!101;UBERON:0001474!1.51e-13!86;UBERON:0000055!5.16e-09!69;UBERON:0000480!1.24e-08!626;UBERON:0004535!1.48e-08!110;UBERON:0000467!1.49e-08!625;UBERON:0001009!5.02e-08!113;UBERON:0002384!8.68e-08!375;UBERON:0002049!1.33e-07!79;UBERON:0007798!1.33e-07!79;UBERON:0000468!1.83e-07!659;UBERON:0001637!2.17e-07!42;UBERON:0003509!2.17e-07!42;UBERON:0004572!2.17e-07!42;UBERON:0004573!3.53e-07!33;UBERON:0004571!3.53e-07!33;UBERON:0004872!4.73e-07!84;UBERON:0001981!5.72e-07!60;UBERON:0007500!5.72e-07!60;UBERON:0004537!5.72e-07!60;UBERON:0006965!5.72e-07!60 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p1@DRAM1 | |short_description=p1@DRAM1 | ||
}} | }} |
Latest revision as of 20:14, 15 September 2015
Short description: | p1@DRAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DRAM1_5end |
Coexpression cluster: | C809_CD14_Olfactory_Synoviocyte_Monocytederived_Mesothelial_Fibroblast_Smooth |
Association with transcript: | 0bp_to_ENST00000544152, ENST00000551403_5end |
EntrezGene: | DRAM1 |
HGNC: | 25645 |
UniProt: | B7Z4T0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.37e-22 | 48 |
phagocyte | 3.37e-22 | 48 |
monopoietic cell | 3.62e-19 | 59 |
monocyte | 3.62e-19 | 59 |
monoblast | 3.62e-19 | 59 |
promonocyte | 3.62e-19 | 59 |
classical monocyte | 1.83e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-18 | 42 |
myeloid leukocyte | 1.89e-18 | 72 |
macrophage dendritic cell progenitor | 1.18e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.83e-17 | 66 |
granulocyte monocyte progenitor cell | 5.70e-17 | 67 |
multi fate stem cell | 2.00e-14 | 427 |
somatic stem cell | 1.00e-13 | 433 |
mesodermal cell | 3.17e-13 | 121 |
stem cell | 7.62e-13 | 441 |
mesenchymal cell | 6.76e-09 | 354 |
smooth muscle cell | 1.16e-08 | 43 |
smooth muscle myoblast | 1.16e-08 | 43 |
connective tissue cell | 3.45e-08 | 361 |
fibroblast | 9.22e-08 | 76 |
lining cell | 1.42e-07 | 58 |
barrier cell | 1.42e-07 | 58 |
vascular associated smooth muscle cell | 1.79e-07 | 32 |
myeloid cell | 7.87e-07 | 108 |
common myeloid progenitor | 7.87e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.54e-22 | 315 |
mesoderm-derived structure | 1.54e-22 | 315 |
presumptive mesoderm | 1.54e-22 | 315 |
lateral plate mesoderm | 2.51e-20 | 203 |
musculoskeletal system | 1.36e-19 | 167 |
hemolymphoid system | 7.11e-18 | 108 |
immune system | 1.68e-17 | 93 |
bone marrow | 4.69e-17 | 76 |
hematopoietic system | 1.76e-15 | 98 |
blood island | 1.76e-15 | 98 |
skeletal system | 3.66e-14 | 100 |
bone element | 1.52e-13 | 82 |
skeletal element | 1.71e-13 | 90 |
vessel | 1.80e-08 | 68 |
cardiovascular system | 4.66e-08 | 109 |
connective tissue | 9.07e-08 | 371 |
circulatory system | 1.51e-07 | 112 |
artery | 2.07e-07 | 42 |
arterial blood vessel | 2.07e-07 | 42 |
arterial system | 2.07e-07 | 42 |
systemic artery | 3.38e-07 | 33 |
systemic arterial system | 3.38e-07 | 33 |
vasculature | 4.52e-07 | 78 |
vascular system | 4.52e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.91e-07 | 14 |