FFCP PHASE1:Hg19::chr4:143395551..143395584,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8821 | |EntrezGene=8821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6075 | |HGNC=6075 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BS68 | |UniProt=Q9BS68 | ||
|association_with_transcript=0bp_to_ENST00000507861,uc003iiz.2_5end | |association_with_transcript=0bp_to_ENST00000507861,uc003iiz.2_5end | ||
|cluster_id=chr4:143395551..143395584,- | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_3_at_INPP4B_5end | |description=CAGE_peak_3_at_INPP4B_5end | ||
|id=chr4:143395551..143395584,- | |id=chr4:143395551..143395584,- | ||
|ontology_enrichment_celltype=CL:0002076!4.14e-29!43;CL:0000066!2.91e-28!254;CL:0000223!3.46e-20!59;CL:0002251!2.38e-13!21;CL:0002368!1.64e-10!13;CL:0000082!4.44e-08!19 | |ontology_enrichment_celltype=CL:0002076!4.14e-29!43;CL:0000066!2.91e-28!254;CL:0000223!3.46e-20!59;CL:0002251!2.38e-13!21;CL:0002368!1.64e-10!13;CL:0000082!4.44e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.19e-22;42!CL:0002368;8.58e-16;13!CL:0002251;7.90e-12;20!CL:0002202;3.38e-09;9!CL:0002632;3.38e-09;9!CL:0000082;3.04e-08;19!CL:0000244;4.21e-08;4!CL:0000731;4.21e-08;4!CL:0002621;3.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.00e-32,42;CL:0000066,1.41e-26,253;CL:0000223,4.66e-22,58;CL:0002368,6.74e-16,13;CL:0002251,8.10e-12,20;CL:0002202,2.63e-09,9;CL:0002632,2.63e-09,9;CL:0000082,2.98e-08,19;CL:0000244,4.68e-08,4;CL:0000731,4.68e-08,4;CL:0002621,3.33e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;2.30e-11;58 | |||
|ontology_enrichment_disease=DOID:305!9.35e-21!106;DOID:299!5.29e-17!25;DOID:0050687!1.48e-15!143;DOID:1749!9.26e-15!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.61e-22;14!DOID:299;1.13e-14;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.96e-22,14;DOID:305,9.95e-21,106;DOID:0050687,7.26e-15,143;DOID:299,8.17e-15,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.39e-23!169;UBERON:0000925!1.39e-23!169;UBERON:0006595!1.39e-23!169;UBERON:0001007!7.27e-19!155;UBERON:0001555!7.27e-19!155;UBERON:0007026!7.27e-19!155;UBERON:0001004!6.37e-17!72;UBERON:0004921!3.99e-16!129;UBERON:0004185!3.99e-16!129;UBERON:0000077!1.02e-15!130;UBERON:0000161!1.37e-14!35;UBERON:0005153!3.07e-13!37;UBERON:0005911!3.31e-13!82;UBERON:0000464!1.04e-11!104;UBERON:0001041!1.96e-11!98;UBERON:0000065!3.59e-11!53;UBERON:0005178!3.02e-10!34;UBERON:0002224!3.02e-10!34;UBERON:0000166!5.60e-10!21;UBERON:0005181!8.94e-10!35;UBERON:0004807!1.31e-09!28;UBERON:0000466!1.47e-09!126;UBERON:0005157!3.27e-09!51;UBERON:0000915!5.56e-09!52;UBERON:0002048!8.56e-09!22;UBERON:0000117!8.56e-09!22;UBERON:0000171!8.56e-09!22;UBERON:0000170!8.56e-09!22;UBERON:0005597!8.56e-09!22;UBERON:0000118!8.56e-09!22;UBERON:0004802!4.44e-08!19;UBERON:0000115!4.44e-08!19;UBERON:0003104!6.65e-08!238;UBERON:0009142!6.65e-08!238;UBERON:0000072!1.31e-07!46;UBERON:0000344!2.45e-07!12;UBERON:0000365!5.05e-07!5;UBERON:0001046!8.63e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;8.37e-13;36!UBERON:0004807;2.66e-12;22!UBERON:0000974;2.72e-11;6!UBERON:0000365;4.69e-10;5!UBERON:0000344;6.00e-10;20!UBERON:0000486;8.23e-10;12!UBERON:0007196;1.18e-08;15!UBERON:0001558;1.18e-08;15!UBERON:0000161;1.50e-08;19!UBERON:0000166;1.50e-08;19!UBERON:0005910;2.71e-08;6!UBERON:0004802;3.04e-08;19!UBERON:0000115;3.04e-08;19!UBERON:0003343;3.19e-08;4!UBERON:0004785;3.19e-08;4!UBERON:0005178;5.55e-08;34!UBERON:0002224;5.55e-08;34!UBERON:0001004;6.14e-08;65!UBERON:0002294;6.97e-08;7!UBERON:0001173;6.97e-08;7!UBERON:0005181;1.73e-07;35!UBERON:0001949;3.42e-07;3!UBERON:0002048;7.89e-07;22!UBERON:0000117;7.89e-07;22!UBERON:0000171;7.89e-07;22!UBERON:0000170;7.89e-07;22!UBERON:0003729;8.32e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.14e-19,160;UBERON:0000925,1.14e-19,160;UBERON:0006595,1.14e-19,160;UBERON:0001004,2.28e-15,74;UBERON:0001007,8.70e-14,145;UBERON:0001555,8.70e-14,145;UBERON:0007026,8.70e-14,145;UBERON:0000161,1.66e-13,36;UBERON:0005911,1.68e-11,82;UBERON:0004921,3.25e-11,118;UBERON:0000065,2.90e-10,54;UBERON:0000365,5.23e-10,5;UBERON:0000344,7.62e-10,20;UBERON:0005178,4.31e-09,34;UBERON:0002224,4.31e-09,34;UBERON:0004807,5.64e-09,28;UBERON:0000915,8.27e-09,52;UBERON:0007196,9.81e-09,15;UBERON:0001558,9.81e-09,15;UBERON:0005181,9.99e-09,35;UBERON:0000166,1.74e-08,22;UBERON:0005910,2.96e-08,6;UBERON:0004802,2.98e-08,19;UBERON:0000115,2.98e-08,19;UBERON:0005153,3.04e-08,37;UBERON:0003343,3.87e-08,4;UBERON:0004785,3.87e-08,4;UBERON:0001041,5.50e-08,87;UBERON:0000072,1.64e-07,47;UBERON:0001949,3.33e-07,3;UBERON:0002048,7.76e-07,22;UBERON:0000117,7.76e-07,22;UBERON:0000171,7.76e-07,22;UBERON:0000170,7.76e-07,22;UBERON:0005597,7.76e-07,22;UBERON:0000118,7.76e-07,22;UBERON:0003729,9.04e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,1.39560233594486,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0.309632246632152,2.75826367343678,1.8072355126695,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.7869535693934,8.18238361772504,10.8985746247821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,1.53650399572076,2.24803506515239,0.301586917234893,0,0,0,0,0,0,0,0,0,39.5102198979638,57.5185728603565,0,0,0,3.74935335947108,2.35174979478403,1.70130116690864,0.268675568108545,0.581267877027924,1.15014803749563,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,43.1088911152062,13.6279863625127,0,0,0,0.902399225814824,6.54630365387526,0.784349769176855,0,4.85537492907228,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,15.5367820439319,8.26417289669956,13.7821729494151,3.13589120652205,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,6.70302275535787,0,0.470719003883896,2.15252686335615,3.36942951335251,3.99087138183008,10.1078296091062,0,0,0,0,0,0,0,0,0.106824071127473,0,6.86112604746889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.2672884554879,0.890894042497916,25.187177572137,0,0,0.111308705022906,0,0,1.79323189425963,0.276283915531148,0,0,0,0,64.345739421486,18.9762445156146,0,5.42538731003135,0,0,0,0,0,136.203719047577,0.61221999997337,7.97499532978273,3.64139034513599,33.3072281883524,6.14607972596635,0,0,0,0,0,0,0,0,0,0,0.41827123283581,4.15531395920504,0,2.3056390438806,1.25660702173681,0.108647371922008,10.2080371114214,1.4655614944298,1.5991043280559,0,0,0,0,0,0,0,0,0.210998064528027,10.6101325303446,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0.728341138602278,0,0,0,0,0,0,1.32930774541437,0.330991955875499,1.2557316736289,2.38944859545918,2.56148591426813,0,2.42983633669183,15.580791188886,11.6659336817739,0,0,0,0,0,1.93978032976839,0,0.225980740780532,0.137041924646751,0,0,11.5375315813534,9.37858196942944,0,6.79352672579243,1.87317542300338,0,0,1.1524383839052,0.124252535565433,2.35694034616795,0.407712618220842,1.04602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0.105600336519406,0.179287339332845,7.29277749813892,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0.513260513652988,45.8129764505837,0.854299300541557,0.628817220398664,0,0,0,0,7.66009509324218,0,0,0,0,3.45519011750515,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0.829412415681711,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0.192619830407303,0,0,0.680117776536817,0,0,0.71635536432595,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,25.1461426796766,0,0,0,0,0.736423801007363,2.79759015438889,3.73246356019784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.4849729395067,2.12345502025933,1.28400018965175,10.3973099535304,0,0,0,0.225630985047772,0,0,0,0.163771917510097,493.987184051148,0,0,0,0,0,0,0.496211178389294,0,31.0462699164217,0,0,0,0.91064876540519,1.24183318227694,0,0,0,0,0.236387681767936,25.9169166408521,3.06123062117005,0,1.12108865325516,0,0,0,0,0,0,0,0,0.828864656652147,0.51215543128185,16.5902318835382,0.430227358820278,0,0,0,17.6412288778919,0.31020638566432,2.8666168169323,0,0.392600934460972,1.82876887473404,0,0,0,4.37139893753226,0,0,0,0,0,1.05673990496671,0.0771741581079447,0,4.23285566725371,1.22574160876953,1.88541237681301,0,0,0,0,0,0,0,14.8199769042696,28.9373794806867,16.7704456380362,1.46067277649303,1.83491713361816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41174371041569,2.3806443146374,0.193766729508018,0.186224142887574,0.784923038064294,0,0,1.52401723527873,0.342233301085281,2.02056159043763,17.9305513481691,5.32256570473621,29.7935963116167,0,0,1.16772762738563,2.34640942403454,0.488965776731466,0.813792356631477,7.32332451604064,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,1.39560233594486,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0.309632246632152,2.75826367343678,1.8072355126695,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.7869535693934,8.18238361772504,10.8985746247821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,1.53650399572076,2.24803506515239,0.301586917234893,0,0,0,0,0,0,0,0,0,39.5102198979638,57.5185728603565,0,0,0,3.74935335947108,2.35174979478403,1.70130116690864,0.268675568108545,0.581267877027924,1.15014803749563,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,43.1088911152062,13.6279863625127,0,0,0,0.902399225814824,6.54630365387526,0.784349769176855,0,4.85537492907228,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,15.5367820439319,8.26417289669956,13.7821729494151,3.13589120652205,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,6.70302275535787,0,0.470719003883896,2.15252686335615,3.36942951335251,3.99087138183008,10.1078296091062,0,0,0,0,0,0,0,0,0.106824071127473,0,6.86112604746889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.2672884554879,0.890894042497916,25.187177572137,0,0,0.111308705022906,0,0,1.79323189425963,0.276283915531148,0,0,0,0,64.345739421486,18.9762445156146,0,5.42538731003135,0,0,0,0,0,136.203719047577,0.61221999997337,7.97499532978273,3.64139034513599,33.3072281883524,6.14607972596635,0,0,0,0,0,0,0,0,0,0,0.41827123283581,4.15531395920504,0,2.3056390438806,1.25660702173681,0.108647371922008,10.2080371114214,1.4655614944298,1.5991043280559,0,0,0,0,0,0,0,0,0.210998064528027,10.6101325303446,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0.728341138602278,0,0,0,0,0,0,1.32930774541437,0.330991955875499,1.2557316736289,2.38944859545918,2.56148591426813,0,2.42983633669183,15.580791188886,11.6659336817739,0,0,0,0,0,1.93978032976839,0,0.225980740780532,0.137041924646751,0,0,11.5375315813534,9.37858196942944,0,6.79352672579243,1.87317542300338,0,0,1.1524383839052,0.124252535565433,2.35694034616795,0.407712618220842,1.04602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0.105600336519406,0.179287339332845,7.29277749813892,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0.513260513652988,45.8129764505837,0.854299300541557,0.628817220398664,0,0,0,0,7.66009509324218,0,0,0,0,3.45519011750515,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0.829412415681711,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0.192619830407303,0,0,0.680117776536817,0,0,0.71635536432595,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,25.1461426796766,0,0,0,0,0.736423801007363,2.79759015438889,3.73246356019784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.4849729395067,2.12345502025933,1.28400018965175,10.3973099535304,0,0,0,0.225630985047772,0,0,0,0.163771917510097,493.987184051148,0,0,0,0,0,0,0.496211178389294,0,31.0462699164217,0,0,0,0.91064876540519,1.24183318227694,0,0,0,0,0.236387681767936,25.9169166408521,3.06123062117005,0,1.12108865325516,0,0,0,0,0,0,0,0,0.828864656652147,0.51215543128185,16.5902318835382,0.430227358820278,0,0,0,17.6412288778919,0.31020638566432,2.8666168169323,0,0.392600934460972,1.82876887473404,0,0,0,4.37139893753226,0,0,0,0,0,1.05673990496671,0.0771741581079447,0,4.23285566725371,1.22574160876953,1.88541237681301,0,0,0,0,0,0,0,14.8199769042696,28.9373794806867,16.7704456380362,1.46067277649303,1.83491713361816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41174371041569,2.3806443146374,0.193766729508018,0.186224142887574,0.784923038064294,0,0,1.52401723527873,0.342233301085281,2.02056159043763,17.9305513481691,5.32256570473621,29.7935963116167,0,0,1.16772762738563,2.34640942403454,0.488965776731466,0.813792356631477,7.32332451604064,0,0 | ||
|short_description=p3@INPP4B | |short_description=p3@INPP4B | ||
}} | }} |
Latest revision as of 21:03, 15 September 2015
Short description: | p3@INPP4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_INPP4B_5end |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | 0bp_to_ENST00000507861, uc003iiz.2_5end |
EntrezGene: | INPP4B |
HGNC: | 6075 |
UniProt: | Q9BS68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.00e-32 | 42 |
epithelial cell | 1.41e-26 | 253 |
endodermal cell | 4.66e-22 | 58 |
respiratory epithelial cell | 6.74e-16 | 13 |
epithelial cell of alimentary canal | 8.10e-12 | 20 |
epithelial cell of tracheobronchial tree | 2.63e-09 | 9 |
epithelial cell of lower respiratory tract | 2.63e-09 | 9 |
epithelial cell of lung | 2.98e-08 | 19 |
transitional epithelial cell | 4.68e-08 | 4 |
urothelial cell | 4.68e-08 | 4 |
gingival epithelial cell | 3.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.96e-22 | 14 |
carcinoma | 9.95e-21 | 106 |
cell type cancer | 7.26e-15 | 143 |
adenocarcinoma | 8.17e-15 | 25 |