FFCP PHASE1:Hg19::chr4:143767467..143767472,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8821 | |EntrezGene=8821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6075 | |HGNC=6075 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000508084_5end | |association_with_transcript=11bp_to_ENST00000508084_5end | ||
|cluster_id=chr4:143767467..143767472,- | |||
|description=CAGE_peak_20_at_INPP4B_5end | |description=CAGE_peak_20_at_INPP4B_5end | ||
|id=chr4:143767467..143767472,- | |id=chr4:143767467..143767472,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000895;1.78e-29;1!CL:0000898;8.99e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,3.16e-29,1;CL:0000895,3.16e-29,1;CL:0002436,3.16e-29,1;CL:0002427,3.16e-29,1;CL:0002428,3.16e-29,1;CL:0002429,3.16e-29,1;CL:0002433,3.16e-29,1;CL:0002431,3.16e-29,1;CL:0002432,3.16e-29,1;CL:0000893,2.37e-15,2;CL:0002489,2.37e-15,2;CL:0000809,2.37e-15,2;CL:0000808,2.37e-15,2;CL:0000894,2.37e-15,2;CL:0000806,2.37e-15,2;CL:0000807,2.37e-15,2;CL:0000805,2.37e-15,2;CL:0002425,2.37e-15,2;CL:0000898,1.09e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002427;1.78e-29;1!UBERON:0010226;1.78e-29;1!UBERON:0004140;1.78e-29;1!CL:0002425;1.78e-15;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.40e-29!115;UBERON:0002020!1.97e-23!34;UBERON:0003528!1.97e-23!34;UBERON:0001893!2.05e-23!34;UBERON:0001049!3.89e-23!57;UBERON:0005068!3.89e-23!57;UBERON:0006241!3.89e-23!57;UBERON:0007135!3.89e-23!57;UBERON:0002791!2.75e-22!33;UBERON:0002616!6.22e-22!59;UBERON:0001869!9.38e-22!32;UBERON:0002780!4.47e-21!41;UBERON:0001890!4.47e-21!41;UBERON:0006240!4.47e-21!41;UBERON:0000955!1.49e-20!69;UBERON:0006238!1.49e-20!69;UBERON:0003080!2.28e-20!42;UBERON:0002619!4.72e-19!22;UBERON:0001950!5.70e-19!20;UBERON:0005743!1.42e-18!86;UBERON:0001017!6.83e-18!82;UBERON:0000956!7.32e-18!25;UBERON:0000203!7.32e-18!25;UBERON:0003075!1.03e-17!86;UBERON:0007284!1.03e-17!86;UBERON:0000073!1.67e-16!94;UBERON:0001016!1.67e-16!94;UBERON:0002346!2.24e-16!90;UBERON:0003056!2.00e-14!61;UBERON:0000153!1.90e-12!129;UBERON:0007811!1.90e-12!129;UBERON:0000033!3.04e-11!123;UBERON:0000200!4.02e-10!6;UBERON:0002021!2.89e-08!5;UBERON:0004121!1.40e-07!169;UBERON:0000025!2.61e-07!194;UBERON:0000062!2.62e-07!511;UBERON:0000924!3.88e-07!173;UBERON:0006601!3.88e-07!173;UBERON:0002308!5.17e-07!9;UBERON:0000125!5.17e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!8.40e-29!115;UBERON:0002020!1.97e-23!34;UBERON:0003528!1.97e-23!34;UBERON:0001893!2.05e-23!34;UBERON:0001049!3.89e-23!57;UBERON:0005068!3.89e-23!57;UBERON:0006241!3.89e-23!57;UBERON:0007135!3.89e-23!57;UBERON:0002791!2.75e-22!33;UBERON:0002616!6.22e-22!59;UBERON:0001869!9.38e-22!32;UBERON:0002780!4.47e-21!41;UBERON:0001890!4.47e-21!41;UBERON:0006240!4.47e-21!41;UBERON:0000955!1.49e-20!69;UBERON:0006238!1.49e-20!69;UBERON:0003080!2.28e-20!42;UBERON:0002619!4.72e-19!22;UBERON:0001950!5.70e-19!20;UBERON:0005743!1.42e-18!86;UBERON:0001017!6.83e-18!82;UBERON:0000956!7.32e-18!25;UBERON:0000203!7.32e-18!25;UBERON:0003075!1.03e-17!86;UBERON:0007284!1.03e-17!86;UBERON:0000073!1.67e-16!94;UBERON:0001016!1.67e-16!94;UBERON:0002346!2.24e-16!90;UBERON:0003056!2.00e-14!61;UBERON:0000153!1.90e-12!129;UBERON:0007811!1.90e-12!129;UBERON:0000033!3.04e-11!123;UBERON:0000200!4.02e-10!6;UBERON:0002021!2.89e-08!5;UBERON:0004121!1.40e-07!169;UBERON:0000025!2.61e-07!194;UBERON:0000062!2.62e-07!511;UBERON:0000924!3.88e-07!173;UBERON:0006601!3.88e-07!173;UBERON:0002308!5.17e-07!9;UBERON:0000125!5.17e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.78e-29;1!UBERON:0002082;1.78e-29;1!UBERON:0002771;1.78e-15;2!UBERON:0001950;7.42e-13;20!UBERON:0002619;8.40e-12;22!UBERON:0004151;8.99e-11;3!UBERON:0000956;1.60e-10;25!UBERON:0000203;1.60e-10;25!UBERON:0001893;3.27e-09;34!UBERON:0001869;9.25e-09;32!UBERON:0003528;7.40e-08;34!UBERON:0002791;7.40e-08;32!UBERON:0002020;7.40e-08;34!UBERON:0001872;5.70e-07;5!UBERON:0002021;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.37e-29,1;UBERON:0002082,2.37e-29,1;UBERON:0010226,2.37e-29,1;UBERON:0002771,2.74e-15,2;UBERON:0001950,8.05e-13,20;UBERON:0002619,9.05e-12,22;UBERON:0004151,9.90e-11,3;UBERON:0000956,1.71e-10,25;UBERON:0000203,1.71e-10,25;UBERON:0002791,2.06e-08,32;UBERON:0001869,2.06e-08,32;UBERON:0002370,2.43e-08,4;UBERON:0005058,2.43e-08,4;UBERON:0009113,2.43e-08,4;UBERON:0003295,2.43e-08,4;UBERON:0005562,2.43e-08,4;UBERON:0003528,5.73e-08,34;UBERON:0002020,5.73e-08,34;UBERON:0001893,5.73e-08,34;UBERON:0001872,5.38e-07,5;UBERON:0002021,5.70e-07,5;UBERON:0002780,9.61e-07,41;UBERON:0001890,9.61e-07,41;UBERON:0003080,9.61e-07,41;UBERON:0006240,9.61e-07,41 | |||
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| ||
|short_description=p20@INPP4B | |short_description=p20@INPP4B | ||
}} | }} |
Latest revision as of 21:18, 15 September 2015
Short description: | p20@INPP4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_INPP4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000508084_5end |
EntrezGene: | INPP4B |
HGNC: | 6075 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 3.16e-29 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.16e-29 | 1 |
mature CD4 single-positive thymocyte | 3.16e-29 | 1 |
resting double-positive thymocyte | 3.16e-29 | 1 |
double-positive blast | 3.16e-29 | 1 |
CD69-positive double-positive thymocyte | 3.16e-29 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.16e-29 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.16e-29 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.16e-29 | 1 |
thymocyte | 2.37e-15 | 2 |
double negative thymocyte | 2.37e-15 | 2 |
double-positive, alpha-beta thymocyte | 2.37e-15 | 2 |
DN4 thymocyte | 2.37e-15 | 2 |
DN1 thymic pro-T cell | 2.37e-15 | 2 |
DN2 thymocyte | 2.37e-15 | 2 |
DN3 thymocyte | 2.37e-15 | 2 |
immature single positive thymocyte | 2.37e-15 | 2 |
early T lineage precursor | 2.37e-15 | 2 |
naive T cell | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.37e-29 | 1 |
cardiac ventricle | 2.37e-29 | 1 |
future cardiac ventricle | 2.37e-29 | 1 |
middle temporal gyrus | 2.74e-15 | 2 |
neocortex | 8.05e-13 | 20 |
regional part of cerebral cortex | 9.05e-12 | 22 |
cardiac chamber | 9.90e-11 | 3 |
cerebral cortex | 1.71e-10 | 25 |
pallium | 1.71e-10 | 25 |
regional part of telencephalon | 2.06e-08 | 32 |
cerebral hemisphere | 2.06e-08 | 32 |
thymus | 2.43e-08 | 4 |
hemolymphoid system gland | 2.43e-08 | 4 |
thymic region | 2.43e-08 | 4 |
pharyngeal gland | 2.43e-08 | 4 |
thymus primordium | 2.43e-08 | 4 |
brain grey matter | 5.73e-08 | 34 |
gray matter | 5.73e-08 | 34 |
telencephalon | 5.73e-08 | 34 |
parietal lobe | 5.38e-07 | 5 |
occipital lobe | 5.70e-07 | 5 |
regional part of forebrain | 9.61e-07 | 41 |
forebrain | 9.61e-07 | 41 |
anterior neural tube | 9.61e-07 | 41 |
future forebrain | 9.61e-07 | 41 |