FFCP PHASE1:Hg19::chr16:27561449..27561481,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:27561449..27561481,+ to FFCP PHASE1:Hg19::chr16:27561449..27561481,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23247 | |EntrezGene=23247 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29068 | |HGNC=29068 | ||
|TSSclassifier=strong | |||
|UniProt=O60303 | |UniProt=O60303 | ||
|association_with_transcript=0bp_to_ENST00000261588,NM_015202,uc002dow.2_5end | |||
|cluster_id=chr16:27561449..27561481,+ | |||
|description=CAGE_peak_1_at_KIAA0556_5end | |||
|id=chr16:27561449..27561481,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.85e-15!42;CL:0000860!7.43e-13!45;CL:0000766!4.05e-12!76;CL:0000557!1.20e-09!71;CL:0002009!3.28e-09!65;CL:0002194!1.24e-08!63;CL:0000576!1.24e-08!63;CL:0000040!1.24e-08!63;CL:0000559!1.24e-08!63;CL:0000839!1.33e-08!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-11;33!CL:0002057;1.62e-11;33!CL:0000576;3.50e-09;48!CL:0000473;1.28e-07;39!CL:0000234;1.28e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.85e-15,42;CL:0002057,8.85e-15,42;CL:0000766,8.10e-14,72;CL:0000473,6.30e-12,48;CL:0000234,6.30e-12,48;CL:0000557,3.72e-11,67;CL:0002009,9.25e-11,61;CL:0002194,3.83e-10,59;CL:0000576,3.83e-10,59;CL:0000040,3.83e-10,59;CL:0000559,3.83e-10,59;CL:0000839,5.34e-10,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.09e-10!102;UBERON:0003061!5.09e-10!102;UBERON:0002193!5.50e-10!112;UBERON:0007023!1.65e-09!115;UBERON:0000062!5.77e-08!511;UBERON:0002371!7.21e-08!80;UBERON:0001474!6.13e-07!86;UBERON:0000467!9.77e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.12e-11,98;UBERON:0003061,3.12e-11,98;UBERON:0002193,3.99e-11,108;UBERON:0007023,2.83e-09,114;UBERON:0002371,4.59e-09,76;UBERON:0002405,9.16e-09,93;UBERON:0001474,5.60e-08,82;UBERON:0001049,7.32e-07,56;UBERON:0005068,7.32e-07,56;UBERON:0006241,7.32e-07,56;UBERON:0007135,7.32e-07,56;UBERON:0000073,7.79e-07,53;UBERON:0002616,7.79e-07,53 | |||
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| ||
|short_description=p1@KIAA0556 | |||
}} | }} |
Latest revision as of 22:14, 15 September 2015
Short description: | p1@KIAA0556 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA0556_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261588, NM_015202, uc002dow.2_5end |
EntrezGene: | KIAA0556 |
HGNC: | 29068 |
UniProt: | O60303 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.85e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.85e-15 | 42 |
myeloid leukocyte | 8.10e-14 | 72 |
defensive cell | 6.30e-12 | 48 |
phagocyte | 6.30e-12 | 48 |
granulocyte monocyte progenitor cell | 3.72e-11 | 67 |
macrophage dendritic cell progenitor | 9.25e-11 | 61 |
monopoietic cell | 3.83e-10 | 59 |
monocyte | 3.83e-10 | 59 |
monoblast | 3.83e-10 | 59 |
promonocyte | 3.83e-10 | 59 |
myeloid lineage restricted progenitor cell | 5.34e-10 | 66 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.12e-11 | 98 |
blood island | 3.12e-11 | 98 |
hemolymphoid system | 3.99e-11 | 108 |
adult organism | 2.83e-09 | 114 |
bone marrow | 4.59e-09 | 76 |
immune system | 9.16e-09 | 93 |
bone element | 5.60e-08 | 82 |
neural tube | 7.32e-07 | 56 |
neural rod | 7.32e-07 | 56 |
future spinal cord | 7.32e-07 | 56 |
neural keel | 7.32e-07 | 56 |
regional part of nervous system | 7.79e-07 | 53 |
regional part of brain | 7.79e-07 | 53 |